RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 RPAP1Q9BWH6 1393 aaPredicted RBP12.82□□□□□ -0.36
GGA3-219ENST00000584550 CXCL11O14625 94 aa12.82□□□□□ -0.36
GGA3-219ENST00000584550 IRF5Q13568 498 aa12.82□□□□□ -0.36
GGA3-219ENST00000584550 NOL9Q5SY16 702 aaKnown RBP12.82□□□□□ -0.36
GGA3-219ENST00000584550 CDC42EP5Q6NZY7 148 aa12.82□□□□□ -0.36
GGA3-219ENST00000584550 SLC4A10Q6U841 1118 aa12.82□□□□□ -0.36
GGA3-219ENST00000584550 HHIPL2Q6UWX4 724 aa12.82□□□□□ -0.36
GGA3-219ENST00000584550 FASTKD5Q7L8L6 764 aaKnown RBP12.82□□□□□ -0.36
GGA3-219ENST00000584550 SUCLG2Q96I99 432 aa12.82□□□□□ -0.36
GGA3-219ENST00000584550 DOCK3Q8IZD9 2030 aa12.82□□□□□ -0.36
GGA3-219ENST00000584550 MAST3O60307 1309 aa12.82□□□□□ -0.36
GGA3-219ENST00000584550 A0A0G2JLL6 359 aaPredicted RBP12.81□□□□□ -0.36
GGA3-219ENST00000584550 SLURP2P0DP57 97 aa12.81□□□□□ -0.36
GGA3-219ENST00000584550 EXOSC9Q06265 439 aaKnown RBP12.81□□□□□ -0.36
GGA3-219ENST00000584550 TRIM32Q13049 653 aa12.81□□□□□ -0.36
GGA3-219ENST00000584550 DIXDC1Q155Q3 683 aa12.81□□□□□ -0.36
GGA3-219ENST00000584550 PRRT2Q7Z6L0 340 aaPredicted RBP12.81□□□□□ -0.36
GGA3-219ENST00000584550 COA7Q96BR5 231 aa12.81□□□□□ -0.36
GGA3-219ENST00000584550 KAZALD1Q96I82 304 aa12.81□□□□□ -0.36
GGA3-219ENST00000584550 FAM161BQ96MY7 647 aa12.81□□□□□ -0.36
GGA3-219ENST00000584550 NBPF3Q9H094 633 aa12.81□□□□□ -0.36
GGA3-219ENST00000584550 PICK1Q9NRD5 415 aa12.81□□□□□ -0.36
GGA3-219ENST00000584550 USP40Q9NVE5 1235 aa12.81□□□□□ -0.36
GGA3-219ENST00000584550 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.81□□□□□ -0.36
GGA3-219ENST00000584550 FAM198AQ9UFP1 575 aa12.81□□□□□ -0.36
GGA3-219ENST00000584550 TRIM75PA6NK02 468 aa12.8□□□□□ -0.36
GGA3-219ENST00000584550 VAMP4O75379 141 aa12.8□□□□□ -0.36
GGA3-219ENST00000584550 PTPRAP18433 802 aa12.8□□□□□ -0.36
GGA3-219ENST00000584550 SCYL3Q8IZE3 742 aa12.8□□□□□ -0.36
GGA3-219ENST00000584550 KLHDC4Q8TBB5 520 aa12.8□□□□□ -0.36
GGA3-219ENST00000584550 C11orf49Q9H6J7 331 aa12.8□□□□□ -0.36
GGA3-219ENST00000584550 DAGLAQ9Y4D2 1042 aa12.8□□□□□ -0.36
GGA3-219ENST00000584550 AFG3L2Q9Y4W6 797 aa12.8□□□□□ -0.36
GGA3-219ENST00000584550 DDX60LQ5H9U9 1706 aaKnown RBP12.79□□□□□ -0.36
GGA3-219ENST00000584550 PHF20L1A8MW92 1017 aa12.79□□□□□ -0.36
GGA3-219ENST00000584550 PDE8BO95263 885 aa12.79□□□□□ -0.36
GGA3-219ENST00000584550 NBPF7P0C2Y1 421 aaPredicted RBP12.79□□□□□ -0.36
GGA3-219ENST00000584550 CAPN2P17655 700 aa12.79□□□□□ -0.36
GGA3-219ENST00000584550 MDM2Q00987 491 aaPredicted RBP12.79□□□□□ -0.36
GGA3-219ENST00000584550 CCDC84Q86UT8 332 aaPredicted RBP12.79□□□□□ -0.36
GGA3-219ENST00000584550 ANKLE1Q8NAG6 615 aa12.79□□□□□ -0.36
GGA3-219ENST00000584550 SUGT1Q9Y2Z0 365 aa12.79□□□□□ -0.36
GGA3-219ENST00000584550 CACNA1FO60840 1977 aa12.79□□□□□ -0.36
GGA3-219ENST00000584550 SPTBN5Q9NRC6 3674 aaKnown RBP12.79□□□□□ -0.36
GGA3-219ENST00000584550 TREML2Q5T2D2 321 aa12.78□□□□□ -0.36
GGA3-219ENST00000584550 ZSCAN29Q8IWY8 852 aaPredicted RBP12.78□□□□□ -0.36
GGA3-219ENST00000584550 VGLL2Q8N8G2 317 aa12.78□□□□□ -0.36
GGA3-219ENST00000584550 CDCA7LQ96GN5 454 aa12.78□□□□□ -0.36
GGA3-219ENST00000584550 GUCD1Q96NT3 240 aa12.78□□□□□ -0.36
GGA3-219ENST00000584550 BICC1Q9H694 974 aaKnown RBP12.78□□□□□ -0.36
GGA3-219ENST00000584550 HMX1Q9NP08 348 aaPredicted RBP12.78□□□□□ -0.36
GGA3-219ENST00000584550 LRRFIP2Q9Y608 721 aaKnown RBP12.78□□□□□ -0.36
GGA3-219ENST00000584550 RPTORQ8N122 1335 aa12.78□□□□□ -0.36
GGA3-219ENST00000584550 ZNF521Q96K83 1311 aa12.78□□□□□ -0.36
GGA3-219ENST00000584550 HMGCRP04035 888 aa12.77□□□□□ -0.37
GGA3-219ENST00000584550 SRCIN1Q9C0H9 1055 aa12.77□□□□□ -0.37
GGA3-219ENST00000584550 SLC45A1Q9Y2W3 748 aa12.77□□□□□ -0.37
GGA3-219ENST00000584550 DNAH12Q6ZR08 3092 aa12.77□□□□□ -0.37
GGA3-219ENST00000584550 PTPRFP10586 1907 aa12.76□□□□□ -0.37
GGA3-219ENST00000584550 MYH13Q9UKX3 1938 aa12.76□□□□□ -0.37
GGA3-219ENST00000584550 E9PSI1 815 aa12.76□□□□□ -0.37
GGA3-219ENST00000584550 IFIT1P09914 478 aaKnown RBP12.76□□□□□ -0.37
GGA3-219ENST00000584550 PRDX5P30044 214 aa12.76□□□□□ -0.37
GGA3-219ENST00000584550 RGS3P49796 1198 aa12.76□□□□□ -0.37
GGA3-219ENST00000584550 HNRNPUQ00839 825 aaKnown RBP eCLIP12.76□□□□□ -0.37
GGA3-219ENST00000584550 WDR66Q8TBY9 1149 aa12.76□□□□□ -0.37
GGA3-219ENST00000584550 AGTPBP1Q9UPW5 1226 aa12.76□□□□□ -0.37
GGA3-219ENST00000584550 PRUNE2Q8WUY3 3088 aa12.75□□□□□ -0.37
GGA3-219ENST00000584550 PFASO15067 1338 aa12.75□□□□□ -0.37
GGA3-219ENST00000584550 ALDH1L1O75891 902 aa12.75□□□□□ -0.37
GGA3-219ENST00000584550 CYP2B6P20813 491 aa12.75□□□□□ -0.37
GGA3-219ENST00000584550 PUM3Q15397 648 aaKnown RBP12.75□□□□□ -0.37
GGA3-219ENST00000584550 SH3BP5LQ7L8J4 393 aa12.75□□□□□ -0.37
GGA3-219ENST00000584550 PHIPQ8WWQ0 1821 aa12.75□□□□□ -0.37
GGA3-219ENST00000584550 DOCK2Q92608 1830 aa12.75□□□□□ -0.37
GGA3-219ENST00000584550 GJD2Q9UKL4 321 aa12.75□□□□□ -0.37
GGA3-219ENST00000584550 OGDHLQ9ULD0 1010 aa12.75□□□□□ -0.37
GGA3-219ENST00000584550 ATRNL1Q5VV63 1379 aa12.74□□□□□ -0.37
GGA3-219ENST00000584550 DDTLA6NHG4 134 aaPredicted RBP12.74□□□□□ -0.37
GGA3-219ENST00000584550 POTEB2H3BUK9 544 aa12.74□□□□□ -0.37
GGA3-219ENST00000584550 LDHBP07195 334 aaKnown RBP12.74□□□□□ -0.37
GGA3-219ENST00000584550 FGFR2P21802 821 aa12.74□□□□□ -0.37
GGA3-219ENST00000584550 SLFN5Q08AF3 891 aa12.74□□□□□ -0.37
GGA3-219ENST00000584550 FAM110CQ1W6H9 321 aa12.74□□□□□ -0.37
GGA3-219ENST00000584550 ANKRD44Q8N8A2 993 aa12.74□□□□□ -0.37
GGA3-219ENST00000584550 TRIB2Q92519 343 aa12.74□□□□□ -0.37
GGA3-219ENST00000584550 PNMA3Q9UL41 463 aa12.74□□□□□ -0.37
GGA3-219ENST00000584550 FAM196BA6NMK8 535 aa12.73□□□□□ -0.37
GGA3-219ENST00000584550 PEX10O60683 326 aa12.73□□□□□ -0.37
GGA3-219ENST00000584550 CTNND1O60716 968 aaKnown RBP12.73□□□□□ -0.37
GGA3-219ENST00000584550 PRKAR2AP13861 404 aaKnown RBP12.73□□□□□ -0.37
GGA3-219ENST00000584550 SLC5A1P13866 664 aa12.73□□□□□ -0.37
GGA3-219ENST00000584550 SPP2Q13103 211 aa12.73□□□□□ -0.37
GGA3-219ENST00000584550 PICALMQ13492 652 aa12.73□□□□□ -0.37
GGA3-219ENST00000584550 LRRC26Q2I0M4 334 aa12.73□□□□□ -0.37
GGA3-219ENST00000584550 DOCK1Q14185 1865 aa12.73□□□□□ -0.37
GGA3-219ENST00000584550 ENTPD3O75355 529 aa12.72□□□□□ -0.37
GGA3-219ENST00000584550 RABL6Q3YEC7 729 aaPredicted RBP12.72□□□□□ -0.37
GGA3-219ENST00000584550 PRDM6Q9NQX0 595 aa12.72□□□□□ -0.37
GGA3-219ENST00000584550 PLXNB2O15031 1838 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms