RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 RNF208Q9H0X6 261 aa16.23■□□□□ 0.19
CDK5RAP3-234ENST00000584525 ZHX2Q9Y6X8 837 aa16.23■□□□□ 0.19
CDK5RAP3-234ENST00000584525 RBBP6Q7Z6E9 1792 aaKnown RBP16.23■□□□□ 0.19
CDK5RAP3-234ENST00000584525 GJB1P08034 283 aa16.22■□□□□ 0.19
CDK5RAP3-234ENST00000584525 GJA8P48165 433 aa16.22■□□□□ 0.19
CDK5RAP3-234ENST00000584525 GPAT2Q6NUI2 795 aa16.22■□□□□ 0.19
CDK5RAP3-234ENST00000584525 FASTKD5Q7L8L6 764 aaKnown RBP16.22■□□□□ 0.19
CDK5RAP3-234ENST00000584525 ZSCAN29Q8IWY8 852 aaPredicted RBP16.22■□□□□ 0.19
CDK5RAP3-234ENST00000584525 DENND2AQ9ULE3 1009 aa16.22■□□□□ 0.19
CDK5RAP3-234ENST00000584525 CIAO1O76071 339 aa16.21■□□□□ 0.19
CDK5RAP3-234ENST00000584525 BCRP11274 1271 aa16.21■□□□□ 0.19
CDK5RAP3-234ENST00000584525 SCYL3Q8IZE3 742 aa16.21■□□□□ 0.19
CDK5RAP3-234ENST00000584525 TMEM57Q8N5G2 664 aa16.21■□□□□ 0.19
CDK5RAP3-234ENST00000584525 HTATIP2Q9BUP3 242 aa16.21■□□□□ 0.19
CDK5RAP3-234ENST00000584525 LRRFIP2Q9Y608 721 aaKnown RBP16.21■□□□□ 0.19
CDK5RAP3-234ENST00000584525 PHF20L1A8MW92 1017 aa16.2■□□□□ 0.18
CDK5RAP3-234ENST00000584525 SEMA3EO15041 775 aa16.2■□□□□ 0.18
CDK5RAP3-234ENST00000584525 PHKA1P46020 1223 aa16.2■□□□□ 0.18
CDK5RAP3-234ENST00000584525 RGS3P49796 1198 aa16.2■□□□□ 0.18
CDK5RAP3-234ENST00000584525 GADL1Q6ZQY3 521 aa16.2■□□□□ 0.18
CDK5RAP3-234ENST00000584525 SLAIN1Q8ND83 568 aa16.2■□□□□ 0.18
CDK5RAP3-234ENST00000584525 MEIS3Q99687 375 aa16.2■□□□□ 0.18
CDK5RAP3-234ENST00000584525 RBM27Q9P2N5 1060 aaKnown RBP16.2■□□□□ 0.18
CDK5RAP3-234ENST00000584525 FBXO3Q9UK99 471 aa16.2■□□□□ 0.18
CDK5RAP3-234ENST00000584525 GABRQQ9UN88 632 aa16.2■□□□□ 0.18
CDK5RAP3-234ENST00000584525 SALL1Q9NSC2 1324 aa16.19■□□□□ 0.18
CDK5RAP3-234ENST00000584525 A0A0G2JLL6 359 aaPredicted RBP16.19■□□□□ 0.18
CDK5RAP3-234ENST00000584525 ENTPD3O75355 529 aa16.19■□□□□ 0.18
CDK5RAP3-234ENST00000584525 GNAI2P04899 355 aa16.19■□□□□ 0.18
CDK5RAP3-234ENST00000584525 PTPRAP18433 802 aa16.19■□□□□ 0.18
CDK5RAP3-234ENST00000584525 IL15P40933 162 aaPredicted RBP16.19■□□□□ 0.18
CDK5RAP3-234ENST00000584525 PRRT2Q7Z6L0 340 aaPredicted RBP16.19■□□□□ 0.18
CDK5RAP3-234ENST00000584525 DZIP1Q86YF9 867 aaKnown RBP16.19■□□□□ 0.18
CDK5RAP3-234ENST00000584525 ZGPATQ8N5A5 531 aaKnown RBP16.19■□□□□ 0.18
CDK5RAP3-234ENST00000584525 IDI2Q9BXS1 227 aa16.19■□□□□ 0.18
CDK5RAP3-234ENST00000584525 TNNQ9UQP3 1299 aa16.19■□□□□ 0.18
CDK5RAP3-234ENST00000584525 ADCY3O60266 1144 aa16.18■□□□□ 0.18
CDK5RAP3-234ENST00000584525 ADORA1P30542 326 aa16.18■□□□□ 0.18
CDK5RAP3-234ENST00000584525 PICALMQ13492 652 aa16.18■□□□□ 0.18
CDK5RAP3-234ENST00000584525 CCDC102BQ68D86 513 aa16.18■□□□□ 0.18
CDK5RAP3-234ENST00000584525 SH3BP5LQ7L8J4 393 aa16.18■□□□□ 0.18
CDK5RAP3-234ENST00000584525 UBE2Q1Q7Z7E8 422 aa16.18■□□□□ 0.18
CDK5RAP3-234ENST00000584525 SLF2Q8IX21 1173 aa16.18■□□□□ 0.18
CDK5RAP3-234ENST00000584525 U2AF1L4Q8WU68 220 aaKnown RBP16.18■□□□□ 0.18
CDK5RAP3-234ENST00000584525 UNC93B1Q9H1C4 597 aa16.18■□□□□ 0.18
CDK5RAP3-234ENST00000584525 CHMP4BQ9H444 224 aaKnown RBP16.18■□□□□ 0.18
CDK5RAP3-234ENST00000584525 ABCF2Q9UG63 623 aa16.18■□□□□ 0.18
CDK5RAP3-234ENST00000584525 AFG3L2Q9Y4W6 797 aa16.18■□□□□ 0.18
CDK5RAP3-234ENST00000584525 NR2E3Q9Y5X4 410 aa16.18■□□□□ 0.18
CDK5RAP3-234ENST00000584525 ATRNL1Q5VV63 1379 aa16.17■□□□□ 0.18
CDK5RAP3-234ENST00000584525 TRIM75PA6NK02 468 aa16.17■□□□□ 0.18
CDK5RAP3-234ENST00000584525 FARP2O94887 1054 aaPredicted RBP16.17■□□□□ 0.18
CDK5RAP3-234ENST00000584525 FLT3LGP49771 235 aa16.17■□□□□ 0.18
CDK5RAP3-234ENST00000584525 SMCR8Q8TEV9 937 aaPredicted RBP16.17■□□□□ 0.18
CDK5RAP3-234ENST00000584525 PA2G4Q9UQ80 394 aaKnown RBP16.17■□□□□ 0.18
CDK5RAP3-234ENST00000584525 GAKO14976 1311 aa16.17■□□□□ 0.18
CDK5RAP3-234ENST00000584525 DDTLA6NHG4 134 aaPredicted RBP16.16■□□□□ 0.18
CDK5RAP3-234ENST00000584525 TNPO2O14787 897 aaKnown RBP16.16■□□□□ 0.18
CDK5RAP3-234ENST00000584525 CTNND1O60716 968 aaKnown RBP16.16■□□□□ 0.18
CDK5RAP3-234ENST00000584525 SGPL1O95470 568 aa16.16■□□□□ 0.18
CDK5RAP3-234ENST00000584525 TFRCP02786 760 aaKnown RBP16.16■□□□□ 0.18
CDK5RAP3-234ENST00000584525 SLURP2P0DP57 97 aa16.16■□□□□ 0.18
CDK5RAP3-234ENST00000584525 ELNP15502 786 aa16.16■□□□□ 0.18
CDK5RAP3-234ENST00000584525 TAOK2Q9UL54 1235 aa16.16■□□□□ 0.18
CDK5RAP3-234ENST00000584525 SLC45A1Q9Y2W3 748 aa16.16■□□□□ 0.18
CDK5RAP3-234ENST00000584525 ZSWIM8A7E2V4 1837 aa16.16■□□□□ 0.18
CDK5RAP3-234ENST00000584525 SRGAP3O43295 1099 aa16.15■□□□□ 0.18
CDK5RAP3-234ENST00000584525 INHAP05111 366 aa16.15■□□□□ 0.18
CDK5RAP3-234ENST00000584525 BTDP43251 543 aa16.15■□□□□ 0.18
CDK5RAP3-234ENST00000584525 TIMM10P62072 90 aa16.15■□□□□ 0.18
CDK5RAP3-234ENST00000584525 MAP3K10Q02779 954 aa16.15■□□□□ 0.18
CDK5RAP3-234ENST00000584525 RASGRF1Q13972 1273 aa16.15■□□□□ 0.18
CDK5RAP3-234ENST00000584525 SPTY2D1Q68D10 685 aaPredicted RBP16.15■□□□□ 0.18
CDK5RAP3-234ENST00000584525 DDX4Q9NQI0 724 aaKnown RBP16.15■□□□□ 0.18
CDK5RAP3-234ENST00000584525 ZBTB7BO15156 539 aaPredicted RBP16.14■□□□□ 0.17
CDK5RAP3-234ENST00000584525 CCDC84Q86UT8 332 aaPredicted RBP16.14■□□□□ 0.17
CDK5RAP3-234ENST00000584525 ANKRD13CQ8N6S4 541 aa16.14■□□□□ 0.17
CDK5RAP3-234ENST00000584525 PANK1Q8TE04 598 aa16.14■□□□□ 0.17
CDK5RAP3-234ENST00000584525 PXYLP1Q8TE99 480 aa16.14■□□□□ 0.17
CDK5RAP3-234ENST00000584525 FAM163AQ96GL9 167 aaPredicted RBP16.14■□□□□ 0.17
CDK5RAP3-234ENST00000584525 DEFB118Q96PH6 123 aa16.14■□□□□ 0.17
CDK5RAP3-234ENST00000584525 COPRSQ9NQ92 184 aa16.14■□□□□ 0.17
CDK5RAP3-234ENST00000584525 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.14■□□□□ 0.17
CDK5RAP3-234ENST00000584525 CEP290O15078 2479 aa16.14■□□□□ 0.17
CDK5RAP3-234ENST00000584525 EVI5O60447 810 aa16.13■□□□□ 0.17
CDK5RAP3-234ENST00000584525 IRF5Q13568 498 aa16.13■□□□□ 0.17
CDK5RAP3-234ENST00000584525 ERICH6Q7L0X2 663 aa16.13■□□□□ 0.17
CDK5RAP3-234ENST00000584525 COA7Q96BR5 231 aa16.13■□□□□ 0.17
CDK5RAP3-234ENST00000584525 DDX19BQ9UMR2 479 aa16.13■□□□□ 0.17
CDK5RAP3-234ENST00000584525 AGTPBP1Q9UPW5 1226 aa16.13■□□□□ 0.17
CDK5RAP3-234ENST00000584525 TRIOBPQ9H2D6 2365 aa16.12■□□□□ 0.17
CDK5RAP3-234ENST00000584525 ZBTB22O15209 634 aa16.12■□□□□ 0.17
CDK5RAP3-234ENST00000584525 MECOMQ03112 1051 aa16.12■□□□□ 0.17
CDK5RAP3-234ENST00000584525 OS9Q13438 667 aaPredicted RBP16.12■□□□□ 0.17
CDK5RAP3-234ENST00000584525 XAGE2Q96GT9 111 aa16.12■□□□□ 0.17
CDK5RAP3-234ENST00000584525 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.12■□□□□ 0.17
CDK5RAP3-234ENST00000584525 PNMA3Q9UL41 463 aa16.12■□□□□ 0.17
CDK5RAP3-234ENST00000584525 AKAP2Q9Y2D5 859 aa16.12■□□□□ 0.17
CDK5RAP3-234ENST00000584525 MROH7-TTC4A0A0A0MT08 1334 aa16.12■□□□□ 0.17
CDK5RAP3-234ENST00000584525 RFX7Q2KHR2 1363 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 223.3 ms