RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 BMP1P13497 986 aa14.01□□□□□ -0.17
CCDC47-206ENST00000584112 SLFN5Q08AF3 891 aa14.01□□□□□ -0.17
CCDC47-206ENST00000584112 PDE3AQ14432 1141 aa14.01□□□□□ -0.17
CCDC47-206ENST00000584112 PXYLP1Q8TE99 480 aa14.01□□□□□ -0.17
CCDC47-206ENST00000584112 RASA3Q14644 834 aa14□□□□□ -0.17
CCDC47-206ENST00000584112 DLGAP5Q15398 846 aa14□□□□□ -0.17
CCDC47-206ENST00000584112 TTLL5Q6EMB2 1281 aa14□□□□□ -0.17
CCDC47-206ENST00000584112 TXNRD3Q86VQ6 643 aa14□□□□□ -0.17
CCDC47-206ENST00000584112 MRPL50Q8N5N7 158 aaKnown RBP14□□□□□ -0.17
CCDC47-206ENST00000584112 CHD9Q3L8U1 2897 aa13.99□□□□□ -0.17
CCDC47-206ENST00000584112 UTYO14607 1347 aa13.99□□□□□ -0.17
CCDC47-206ENST00000584112 SMIM22K7EJ46 135 aa13.99□□□□□ -0.17
CCDC47-206ENST00000584112 IRF6O14896 467 aa13.99□□□□□ -0.17
CCDC47-206ENST00000584112 MAP3K9P80192 1104 aa13.99□□□□□ -0.17
CCDC47-206ENST00000584112 TRIM32Q13049 653 aa13.99□□□□□ -0.17
CCDC47-206ENST00000584112 EPHA10Q5JZY3 1008 aa13.99□□□□□ -0.17
CCDC47-206ENST00000584112 LDHAL6AQ6ZMR3 332 aa13.99□□□□□ -0.17
CCDC47-206ENST00000584112 C15orf52Q6ZUT6 534 aaKnown RBP13.99□□□□□ -0.17
CCDC47-206ENST00000584112 ZNF804AQ7Z570 1209 aa13.99□□□□□ -0.17
CCDC47-206ENST00000584112 CNNM1Q9NRU3 951 aa13.99□□□□□ -0.17
CCDC47-206ENST00000584112 SPDYE5A6NIY4 337 aa13.98□□□□□ -0.17
CCDC47-206ENST00000584112 PDHXO00330 501 aa13.98□□□□□ -0.17
CCDC47-206ENST00000584112 TAF5LO75529 589 aa13.98□□□□□ -0.17
CCDC47-206ENST00000584112 BCRP11274 1271 aa13.98□□□□□ -0.17
CCDC47-206ENST00000584112 KLRK1P26718 216 aa13.98□□□□□ -0.17
CCDC47-206ENST00000584112 SNAPC2Q13487 334 aa13.98□□□□□ -0.17
CCDC47-206ENST00000584112 ALDH1L2Q3SY69 923 aa13.98□□□□□ -0.17
CCDC47-206ENST00000584112 SSH1Q8WYL5 1049 aa13.98□□□□□ -0.17
CCDC47-206ENST00000584112 OGDHLQ9ULD0 1010 aa13.98□□□□□ -0.17
CCDC47-206ENST00000584112 C5orf42Q9H799 3197 aa13.98□□□□□ -0.17
CCDC47-206ENST00000584112 CT47B1P0C2W7 299 aaPredicted RBP13.97□□□□□ -0.17
CCDC47-206ENST00000584112 NBPF7P0C2Y1 421 aaPredicted RBP13.97□□□□□ -0.17
CCDC47-206ENST00000584112 COL6A1P12109 1028 aa13.97□□□□□ -0.17
CCDC47-206ENST00000584112 KCNQ1P51787 676 aa13.97□□□□□ -0.17
CCDC47-206ENST00000584112 GTF2IP78347 998 aa13.97□□□□□ -0.17
CCDC47-206ENST00000584112 TFF2Q03403 129 aa13.97□□□□□ -0.17
CCDC47-206ENST00000584112 IRF5Q13568 498 aa13.97□□□□□ -0.17
CCDC47-206ENST00000584112 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.97□□□□□ -0.17
CCDC47-206ENST00000584112 SUCLG2Q96I99 432 aa13.97□□□□□ -0.17
CCDC47-206ENST00000584112 ZNF594Q96JF6 807 aaPredicted RBP13.97□□□□□ -0.17
CCDC47-206ENST00000584112 CD209Q9NNX6 404 aa13.97□□□□□ -0.17
CCDC47-206ENST00000584112 CSADQ9Y600 493 aa13.97□□□□□ -0.17
CCDC47-206ENST00000584112 SNCAIPQ9Y6H5 919 aa13.97□□□□□ -0.17
CCDC47-206ENST00000584112 MAST2Q6P0Q8 1798 aa13.96□□□□□ -0.17
CCDC47-206ENST00000584112 PLIN1O60240 522 aa13.96□□□□□ -0.17
CCDC47-206ENST00000584112 MTMR14Q8NCE2 650 aa13.96□□□□□ -0.17
CCDC47-206ENST00000584112 PHOX2BQ99453 314 aa13.96□□□□□ -0.17
CCDC47-206ENST00000584112 SNAP23O00161 211 aa13.95□□□□□ -0.18
CCDC47-206ENST00000584112 KRT37O76014 449 aa13.95□□□□□ -0.18
CCDC47-206ENST00000584112 CYP2C8P10632 490 aa13.95□□□□□ -0.18
CCDC47-206ENST00000584112 IL1R1P14778 569 aa13.95□□□□□ -0.18
CCDC47-206ENST00000584112 FOXK2Q01167 660 aa13.95□□□□□ -0.18
CCDC47-206ENST00000584112 TRMT2AQ8IZ69 625 aaKnown RBP13.95□□□□□ -0.18
CCDC47-206ENST00000584112 CDCA7LQ96GN5 454 aa13.95□□□□□ -0.18
CCDC47-206ENST00000584112 PRMT6Q96LA8 375 aaPredicted RBP13.95□□□□□ -0.18
CCDC47-206ENST00000584112 BICC1Q9H694 974 aaKnown RBP13.95□□□□□ -0.18
CCDC47-206ENST00000584112 SMC4Q9NTJ3 1288 aa13.95□□□□□ -0.18
CCDC47-206ENST00000584112 MROH5Q6ZUA9 1318 aa13.94□□□□□ -0.18
CCDC47-206ENST00000584112 FKBP1AP62942 108 aaKnown RBP13.94□□□□□ -0.18
CCDC47-206ENST00000584112 UBE4AQ14139 1066 aa13.94□□□□□ -0.18
CCDC47-206ENST00000584112 RABL6Q3YEC7 729 aaPredicted RBP13.94□□□□□ -0.18
CCDC47-206ENST00000584112 AKNAD1Q5T1N1 836 aa13.94□□□□□ -0.18
CCDC47-206ENST00000584112 ANKRD23Q86SG2 305 aa13.94□□□□□ -0.18
CCDC47-206ENST00000584112 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.94□□□□□ -0.18
CCDC47-206ENST00000584112 KAZALD1Q96I82 304 aa13.94□□□□□ -0.18
CCDC47-206ENST00000584112 FBXL18Q96ME1 805 aa13.94□□□□□ -0.18
CCDC47-206ENST00000584112 ZNF576Q9H609 170 aa13.94□□□□□ -0.18
CCDC47-206ENST00000584112 TNPO2O14787 897 aaKnown RBP13.93□□□□□ -0.18
CCDC47-206ENST00000584112 DNAJB2P25686 324 aa13.93□□□□□ -0.18
CCDC47-206ENST00000584112 ADGRE1Q14246 886 aa13.93□□□□□ -0.18
CCDC47-206ENST00000584112 CFAP100Q494V2 611 aa13.93□□□□□ -0.18
CCDC47-206ENST00000584112 ERO1BQ86YB8 467 aa13.93□□□□□ -0.18
CCDC47-206ENST00000584112 ZKSCAN4Q969J2 545 aaPredicted RBP13.93□□□□□ -0.18
CCDC47-206ENST00000584112 TEPSINQ96N21 525 aa13.93□□□□□ -0.18
CCDC47-206ENST00000584112 GAS2L1Q99501 681 aaPredicted RBP13.93□□□□□ -0.18
CCDC47-206ENST00000584112 PRDM12Q9H4Q4 367 aa13.93□□□□□ -0.18
CCDC47-206ENST00000584112 HMX1Q9NP08 348 aaPredicted RBP13.93□□□□□ -0.18
CCDC47-206ENST00000584112 CHD7Q9P2D1 2997 aa13.93□□□□□ -0.18
CCDC47-206ENST00000584112 SPDYE2BA6NHP3 402 aa13.92□□□□□ -0.18
CCDC47-206ENST00000584112 F8W031 263 aaPredicted RBP13.92□□□□□ -0.18
CCDC47-206ENST00000584112 SPDYE6P0CI01 402 aa13.92□□□□□ -0.18
CCDC47-206ENST00000584112 PPIL2Q13356 520 aa13.92□□□□□ -0.18
CCDC47-206ENST00000584112 ANKRD44Q8N8A2 993 aa13.92□□□□□ -0.18
CCDC47-206ENST00000584112 USP44Q9H0E7 712 aa13.92□□□□□ -0.18
CCDC47-206ENST00000584112 EPG5Q9HCE0 2579 aa13.91□□□□□ -0.18
CCDC47-206ENST00000584112 HIBADHP31937 336 aaKnown RBP13.91□□□□□ -0.18
CCDC47-206ENST00000584112 MOGSQ13724 837 aa13.91□□□□□ -0.18
CCDC47-206ENST00000584112 CERS5Q8N5B7 392 aa13.91□□□□□ -0.18
CCDC47-206ENST00000584112 UIMC1Q96RL1 719 aa13.91□□□□□ -0.18
CCDC47-206ENST00000584112 PUS3Q9BZE2 481 aaKnown RBP13.91□□□□□ -0.18
CCDC47-206ENST00000584112 CXXC1Q9P0U4 656 aaPredicted RBP13.91□□□□□ -0.18
CCDC47-206ENST00000584112 AK9Q5TCS8 1911 aa13.91□□□□□ -0.18
CCDC47-206ENST00000584112 MYO1BO43795 1136 aa13.9□□□□□ -0.18
CCDC47-206ENST00000584112 HMGCRP04035 888 aa13.9□□□□□ -0.18
CCDC47-206ENST00000584112 METTL24Q5JXM2 366 aa13.9□□□□□ -0.18
CCDC47-206ENST00000584112 TDRD7Q8NHU6 1098 aaKnown RBP13.9□□□□□ -0.18
CCDC47-206ENST00000584112 BADQ92934 168 aa13.9□□□□□ -0.18
CCDC47-206ENST00000584112 API5Q9BZZ5 524 aaKnown RBP13.9□□□□□ -0.18
CCDC47-206ENST00000584112 TMEM39BQ9GZU3 492 aa13.9□□□□□ -0.18
CCDC47-206ENST00000584112 HDAC5Q9UQL6 1122 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms