RNA–Protein interactions for RNA: ENST00000584095.1

TTC39C-208, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 553 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-208ENST00000584095 EHMT1Q9H9B1 1298 aa8.63□□□□□ -1.03
TTC39C-208ENST00000584095 LOC100289279A0A1B0GTE1 492 aa8.62□□□□□ -1.03
TTC39C-208ENST00000584095 LIG1P18858 919 aa8.62□□□□□ -1.03
TTC39C-208ENST00000584095 MAP4K3Q8IVH8 894 aa8.62□□□□□ -1.03
TTC39C-208ENST00000584095 PLPPR2Q96GM1 343 aa8.62□□□□□ -1.03
TTC39C-208ENST00000584095 KCNK4Q9NYG8 393 aa8.62□□□□□ -1.03
TTC39C-208ENST00000584095 DLGAP3O95886 979 aa8.61□□□□□ -1.03
TTC39C-208ENST00000584095 RAB33AQ14088 237 aa8.61□□□□□ -1.03
TTC39C-208ENST00000584095 LSRQ86X29 649 aaPredicted RBP8.61□□□□□ -1.03
TTC39C-208ENST00000584095 ATE1O95260 518 aa8.6□□□□□ -1.03
TTC39C-208ENST00000584095 IMPDH2P12268 514 aa8.6□□□□□ -1.03
TTC39C-208ENST00000584095 CD68P34810 354 aaPredicted RBP8.6□□□□□ -1.03
TTC39C-208ENST00000584095 KIF4BQ2VIQ3 1234 aa8.6□□□□□ -1.03
TTC39C-208ENST00000584095 TNNI3KQ59H18 835 aa8.6□□□□□ -1.03
TTC39C-208ENST00000584095 RBBP8NLQ8NC74 664 aaPredicted RBP8.6□□□□□ -1.03
TTC39C-208ENST00000584095 CRBNQ96SW2 442 aa8.6□□□□□ -1.03
TTC39C-208ENST00000584095 TRIM55Q9BYV6 548 aa8.6□□□□□ -1.03
TTC39C-208ENST00000584095 CORINQ9Y5Q5 1042 aa8.6□□□□□ -1.03
TTC39C-208ENST00000584095 SNCAIPQ9Y6H5 919 aa8.6□□□□□ -1.03
TTC39C-208ENST00000584095 PRR36Q9H6K5 1346 aa8.59□□□□□ -1.03
TTC39C-208ENST00000584095 K7ELQ4 463 aaPredicted RBP8.59□□□□□ -1.03
TTC39C-208ENST00000584095 HTR3BO95264 441 aa8.59□□□□□ -1.03
TTC39C-208ENST00000584095 DTWD1Q8N5C7 304 aa8.59□□□□□ -1.03
TTC39C-208ENST00000584095 OR6P1Q8NGX9 317 aa8.59□□□□□ -1.03
TTC39C-208ENST00000584095 UBASH3BQ8TF42 649 aa8.59□□□□□ -1.03
TTC39C-208ENST00000584095 SIRPGQ9P1W8 387 aa8.59□□□□□ -1.03
TTC39C-208ENST00000584095 CDK11AQ9UQ88 783 aaPredicted RBP8.59□□□□□ -1.03
TTC39C-208ENST00000584095 PCDHGC5Q9Y5F6 944 aa8.59□□□□□ -1.03
TTC39C-208ENST00000584095 CADPSQ9ULU8 1353 aa8.59□□□□□ -1.03
TTC39C-208ENST00000584095 DCDC2CA8MYV0 355 aa8.58□□□□□ -1.04
TTC39C-208ENST00000584095 CYFIP1Q7L576 1253 aa8.58□□□□□ -1.04
TTC39C-208ENST00000584095 HDXQ7Z353 690 aa8.58□□□□□ -1.04
TTC39C-208ENST00000584095 MKL1Q969V6 931 aa8.58□□□□□ -1.04
TTC39C-208ENST00000584095 ELMO3Q96BJ8 720 aa8.58□□□□□ -1.04
TTC39C-208ENST00000584095 WDR18Q9BV38 432 aa8.58□□□□□ -1.04
TTC39C-208ENST00000584095 ANTXR1Q9H6X2 564 aa8.58□□□□□ -1.04
TTC39C-208ENST00000584095 NFE2L2Q16236 605 aa8.57□□□□□ -1.04
TTC39C-208ENST00000584095 ZC3H12AQ5D1E8 599 aaKnown RBP8.57□□□□□ -1.04
TTC39C-208ENST00000584095 TRAPPC3LQ5T215 181 aa8.57□□□□□ -1.04
TTC39C-208ENST00000584095 ZNF385CQ66K41 422 aaPredicted RBP8.57□□□□□ -1.04
TTC39C-208ENST00000584095 ZNF746Q6NUN9 644 aaPredicted RBP8.57□□□□□ -1.04
TTC39C-208ENST00000584095 CELF2-AS1Q8N7Q2 184 aa8.57□□□□□ -1.04
TTC39C-208ENST00000584095 TRIM11Q96F44 468 aa8.57□□□□□ -1.04
TTC39C-208ENST00000584095 ACTR10Q9NZ32 417 aa8.57□□□□□ -1.04
TTC39C-208ENST00000584095 TMA7Q9Y2S6 64 aaKnown RBP8.57□□□□□ -1.04
TTC39C-208ENST00000584095 R3HCC1Q9Y3T6 440 aaKnown RBP8.57□□□□□ -1.04
TTC39C-208ENST00000584095 TBX22Q9Y458 520 aa8.57□□□□□ -1.04
TTC39C-208ENST00000584095 MEIS3P2A8K0S8 358 aa8.56□□□□□ -1.04
TTC39C-208ENST00000584095 AOC2O75106 756 aa8.56□□□□□ -1.04
TTC39C-208ENST00000584095 WISP1O95388 367 aa8.56□□□□□ -1.04
TTC39C-208ENST00000584095 HNRNPUQ00839 825 aaKnown RBP eCLIP8.56□□□□□ -1.04
TTC39C-208ENST00000584095 HP1BP3Q5SSJ5 553 aaPredicted RBP8.56□□□□□ -1.04
TTC39C-208ENST00000584095 RUFY4Q6ZNE9 571 aa8.56□□□□□ -1.04
TTC39C-208ENST00000584095 C12orf40Q86WS4 652 aa8.56□□□□□ -1.04
TTC39C-208ENST00000584095 FBXO11Q86XK2 927 aa8.56□□□□□ -1.04
TTC39C-208ENST00000584095 FMR1NBQ8N0W7 255 aaPredicted RBP8.56□□□□□ -1.04
TTC39C-208ENST00000584095 TNKS2Q9H2K2 1166 aa8.56□□□□□ -1.04
TTC39C-208ENST00000584095 RRAGCQ9HB90 399 aa8.56□□□□□ -1.04
TTC39C-208ENST00000584095 CSADQ9Y600 493 aa8.56□□□□□ -1.04
TTC39C-208ENST00000584095 TACC3Q9Y6A5 838 aa8.56□□□□□ -1.04
TTC39C-208ENST00000584095 A0A0A0MRY4 1105 aa8.55□□□□□ -1.04
TTC39C-208ENST00000584095 TLDC2A0PJX2 215 aa8.55□□□□□ -1.04
TTC39C-208ENST00000584095 DLL1O00548 723 aa8.55□□□□□ -1.04
TTC39C-208ENST00000584095 U2SURPO15042 1029 aaKnown RBP8.55□□□□□ -1.04
TTC39C-208ENST00000584095 DNAJA2O60884 412 aa8.55□□□□□ -1.04
TTC39C-208ENST00000584095 WFS1O76024 890 aa8.55□□□□□ -1.04
TTC39C-208ENST00000584095 RASA3Q14644 834 aa8.55□□□□□ -1.04
TTC39C-208ENST00000584095 JAZF1Q86VZ6 243 aa8.55□□□□□ -1.04
TTC39C-208ENST00000584095 TMEM40Q8WWA1 233 aa8.55□□□□□ -1.04
TTC39C-208ENST00000584095 MRFAP1L1Q96HT8 127 aa8.55□□□□□ -1.04
TTC39C-208ENST00000584095 SNTG2Q9NY99 539 aa8.55□□□□□ -1.04
TTC39C-208ENST00000584095 REV1Q9UBZ9 1251 aa8.55□□□□□ -1.04
TTC39C-208ENST00000584095 PRAMEF27A3QJZ7 478 aa8.54□□□□□ -1.04
TTC39C-208ENST00000584095 RING1Q06587 406 aa8.54□□□□□ -1.04
TTC39C-208ENST00000584095 NEDD1Q8NHV4 660 aa8.54□□□□□ -1.04
TTC39C-208ENST00000584095 DCAF11Q8TEB1 546 aa8.54□□□□□ -1.04
TTC39C-208ENST00000584095 SRPK1Q96SB4 655 aaKnown RBP8.54□□□□□ -1.04
TTC39C-208ENST00000584095 HIF3AQ9Y2N7 669 aa8.54□□□□□ -1.04
TTC39C-208ENST00000584095 MSRB2Q9Y3D2 182 aa8.54□□□□□ -1.04
TTC39C-208ENST00000584095 SYNGAP1Q96PV0 1343 aa8.54□□□□□ -1.04
TTC39C-208ENST00000584095 FAM221BA6H8Z2 402 aa8.53□□□□□ -1.04
TTC39C-208ENST00000584095 SLFN14P0C7P3 912 aa8.53□□□□□ -1.04
TTC39C-208ENST00000584095 PLCG1P19174 1290 aa8.53□□□□□ -1.04
TTC39C-208ENST00000584095 GRK4P32298 578 aa8.53□□□□□ -1.04
TTC39C-208ENST00000584095 CASP7P55210 303 aa8.53□□□□□ -1.04
TTC39C-208ENST00000584095 SNRPNP63162 240 aaKnown RBP8.53□□□□□ -1.04
TTC39C-208ENST00000584095 DDR2Q16832 855 aa8.53□□□□□ -1.04
TTC39C-208ENST00000584095 DUOXA2Q1HG44 320 aa8.53□□□□□ -1.04
TTC39C-208ENST00000584095 LRRFIP1Q32MZ4 808 aaKnown RBP8.53□□□□□ -1.04
TTC39C-208ENST00000584095 EXOSC6Q5RKV6 272 aaKnown RBP8.53□□□□□ -1.04
TTC39C-208ENST00000584095 LCE2AQ5TA79 106 aaPredicted RBP8.53□□□□□ -1.04
TTC39C-208ENST00000584095 OVOS1Q6IE37 1185 aa8.53□□□□□ -1.04
TTC39C-208ENST00000584095 LINC00114Q6XXX2 140 aa8.53□□□□□ -1.04
TTC39C-208ENST00000584095 NLGN1Q8N2Q7 840 aa8.53□□□□□ -1.04
TTC39C-208ENST00000584095 C19orf47Q8N9M1 422 aaKnown RBP8.53□□□□□ -1.04
TTC39C-208ENST00000584095 DEPDC7Q96QD5 511 aa8.53□□□□□ -1.04
TTC39C-208ENST00000584095 TMPRSS13Q9BYE2 586 aa8.53□□□□□ -1.04
TTC39C-208ENST00000584095 PPP1R9AQ9ULJ8 1098 aa8.53□□□□□ -1.04
TTC39C-208ENST00000584095 TMPRSS2O15393 492 aa8.52□□□□□ -1.05
TTC39C-208ENST00000584095 RAC1P63000 192 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms