RNA–Protein interactions for RNA: ENST00000583930.5

CCDC178-213, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-213ENST00000583930 CHPF2Q9P2E5 772 aa3.81□□□□□ -1.8
CCDC178-213ENST00000583930 SERTAD1Q9UHV2 236 aa3.81□□□□□ -1.8
CCDC178-213ENST00000583930 DDX19BQ9UMR2 479 aa3.81□□□□□ -1.8
CCDC178-213ENST00000583930 SOWAHDA6NJG2 315 aa3.8□□□□□ -1.8
CCDC178-213ENST00000583930 ATP5J2-PTCD1G3V325 749 aa3.8□□□□□ -1.8
CCDC178-213ENST00000583930 PDE8AO60658 829 aa3.8□□□□□ -1.8
CCDC178-213ENST00000583930 NPR1P16066 1061 aa3.8□□□□□ -1.8
CCDC178-213ENST00000583930 PDE6BP35913 854 aa3.8□□□□□ -1.8
CCDC178-213ENST00000583930 AMIGO3Q86WK7 504 aa3.8□□□□□ -1.8
CCDC178-213ENST00000583930 CCDC146Q8IYE0 955 aa3.8□□□□□ -1.8
CCDC178-213ENST00000583930 TNS4Q8IZW8 715 aa3.8□□□□□ -1.8
CCDC178-213ENST00000583930 GIPC2Q8TF65 315 aa3.8□□□□□ -1.8
CCDC178-213ENST00000583930 FAM161BQ96MY7 647 aa3.8□□□□□ -1.8
CCDC178-213ENST00000583930 SAP130Q9H0E3 1048 aa3.8□□□□□ -1.8
CCDC178-213ENST00000583930 DNMT3AQ9Y6K1 912 aaPredicted RBP3.8□□□□□ -1.8
CCDC178-213ENST00000583930 FAM205AQ6ZU69 1335 aa3.8□□□□□ -1.8
CCDC178-213ENST00000583930 MYH2Q9UKX2 1941 aa3.8□□□□□ -1.8
CCDC178-213ENST00000583930 RAB11FIP3O75154 756 aa3.8□□□□□ -1.8
CCDC178-213ENST00000583930 TRIM27P14373 513 aa3.8□□□□□ -1.8
CCDC178-213ENST00000583930 TNNT2P45379 298 aaPredicted RBP3.8□□□□□ -1.8
CCDC178-213ENST00000583930 SP8Q8IXZ3 490 aa3.8□□□□□ -1.8
CCDC178-213ENST00000583930 SMC5Q8IY18 1101 aa3.8□□□□□ -1.8
CCDC178-213ENST00000583930 GTF3C2Q8WUA4 911 aaPredicted RBP3.8□□□□□ -1.8
CCDC178-213ENST00000583930 CDC5LQ99459 802 aaKnown RBP3.8□□□□□ -1.8
CCDC178-213ENST00000583930 PRR14Q9BWN1 585 aa3.8□□□□□ -1.8
CCDC178-213ENST00000583930 STK31Q9BXU1 1019 aa3.8□□□□□ -1.8
CCDC178-213ENST00000583930 CWC25Q9NXE8 425 aaPredicted RBP3.8□□□□□ -1.8
CCDC178-213ENST00000583930 STAP2Q9UGK3 403 aa3.8□□□□□ -1.8
CCDC178-213ENST00000583930 RCAN3Q9UKA8 241 aa3.8□□□□□ -1.8
CCDC178-213ENST00000583930 NOD1Q9Y239 953 aa3.8□□□□□ -1.8
CCDC178-213ENST00000583930 LRRC37A2A6NM11 1700 aa3.8□□□□□ -1.8
CCDC178-213ENST00000583930 MROH5Q6ZUA9 1318 aa3.79□□□□□ -1.8
CCDC178-213ENST00000583930 ANKRD33BA6NCL7 494 aa3.79□□□□□ -1.8
CCDC178-213ENST00000583930 ERVH48-1M5A8F1 160 aa3.79□□□□□ -1.8
CCDC178-213ENST00000583930 BBOX1O75936 387 aa3.79□□□□□ -1.8
CCDC178-213ENST00000583930 SF3B2Q13435 895 aaKnown RBP3.79□□□□□ -1.8
CCDC178-213ENST00000583930 PROSER3Q2NL68 480 aa3.79□□□□□ -1.8
CCDC178-213ENST00000583930 FAM26DQ5JW98 314 aa3.79□□□□□ -1.8
CCDC178-213ENST00000583930 SH3PXD2AQ5TCZ1 1133 aa3.79□□□□□ -1.8
CCDC178-213ENST00000583930 PRR5LQ6MZQ0 368 aa3.79□□□□□ -1.8
CCDC178-213ENST00000583930 LTV1Q96GA3 475 aaPredicted RBP3.79□□□□□ -1.8
CCDC178-213ENST00000583930 USP44Q9H0E7 712 aa3.79□□□□□ -1.8
CCDC178-213ENST00000583930 BSDC1Q9NW68 430 aaPredicted RBP3.79□□□□□ -1.8
CCDC178-213ENST00000583930 PGAP2Q9UHJ9 254 aa3.79□□□□□ -1.8
CCDC178-213ENST00000583930 GNEQ9Y223 722 aaKnown RBP3.79□□□□□ -1.8
CCDC178-213ENST00000583930 USP3Q9Y6I4 520 aa3.79□□□□□ -1.8
CCDC178-213ENST00000583930 MYH1P12882 1939 aa3.79□□□□□ -1.8
CCDC178-213ENST00000583930 FRMPD3Q5JV73 1810 aa3.79□□□□□ -1.8
CCDC178-213ENST00000583930 SH3TC1Q8TE82 1336 aa3.79□□□□□ -1.8
CCDC178-213ENST00000583930 GRM8O00222 908 aa3.79□□□□□ -1.8
CCDC178-213ENST00000583930 SRGNP10124 158 aa3.79□□□□□ -1.8
CCDC178-213ENST00000583930 FSHRP23945 695 aa3.79□□□□□ -1.8
CCDC178-213ENST00000583930 MARSP56192 900 aaKnown RBP3.79□□□□□ -1.8
CCDC178-213ENST00000583930 ATP8B2P98198 1209 aa3.79□□□□□ -1.8
CCDC178-213ENST00000583930 ELOAQ14241 798 aaKnown RBP3.79□□□□□ -1.8
CCDC178-213ENST00000583930 NFIXQ14938 502 aa3.79□□□□□ -1.8
CCDC178-213ENST00000583930 CERS3Q8IU89 383 aa3.79□□□□□ -1.8
CCDC178-213ENST00000583930 CLP1Q92989 425 aaKnown RBP3.79□□□□□ -1.8
CCDC178-213ENST00000583930 MRRFQ96E11 262 aaKnown RBP3.79□□□□□ -1.8
CCDC178-213ENST00000583930 ZBED3Q96IU2 234 aaPredicted RBP3.79□□□□□ -1.8
CCDC178-213ENST00000583930 UTP14AQ9BVJ6 771 aaKnown RBP3.79□□□□□ -1.8
CCDC178-213ENST00000583930 MAF1Q9H063 256 aa3.79□□□□□ -1.8
CCDC178-213ENST00000583930 RNF223E7ERA6 249 aa3.79□□□□□ -1.8
CCDC178-213ENST00000583930 IL1R1P14778 569 aa3.79□□□□□ -1.8
CCDC178-213ENST00000583930 SEC13P55735 322 aa3.79□□□□□ -1.8
CCDC178-213ENST00000583930 CTSWP56202 376 aa3.79□□□□□ -1.8
CCDC178-213ENST00000583930 HDLBPQ00341 1268 aaKnown RBP3.79□□□□□ -1.8
CCDC178-213ENST00000583930 INTS6LQ5JSJ4 861 aaKnown RBP3.79□□□□□ -1.8
CCDC178-213ENST00000583930 BPHLQ86WA6 291 aaPredicted RBP3.79□□□□□ -1.8
CCDC178-213ENST00000583930 DDX54Q8TDD1 881 aaKnown RBP3.79□□□□□ -1.8
CCDC178-213ENST00000583930 XAGE3Q8WTP9 111 aa3.79□□□□□ -1.8
CCDC178-213ENST00000583930 MASTLQ96GX5 879 aa3.79□□□□□ -1.8
CCDC178-213ENST00000583930 KCTD15Q96SI1 283 aaPredicted RBP3.79□□□□□ -1.8
CCDC178-213ENST00000583930 SETDB2Q96T68 719 aa3.79□□□□□ -1.8
CCDC178-213ENST00000583930 TSPAN10Q9H1Z9 355 aaPredicted RBP3.79□□□□□ -1.8
CCDC178-213ENST00000583930 MYH15Q9Y2K3 1946 aa3.78□□□□□ -1.8
CCDC178-213ENST00000583930 ROBO3Q96MS0 1386 aa3.78□□□□□ -1.8
CCDC178-213ENST00000583930 RLFQ13129 1914 aa3.78□□□□□ -1.8
CCDC178-213ENST00000583930 PPM1GO15355 546 aaPredicted RBP3.78□□□□□ -1.8
CCDC178-213ENST00000583930 ARID4AP29374 1257 aaPredicted RBP3.78□□□□□ -1.8
CCDC178-213ENST00000583930 GRAPQ13588 217 aa3.78□□□□□ -1.8
CCDC178-213ENST00000583930 DCTN1Q14203 1278 aa3.78□□□□□ -1.8
CCDC178-213ENST00000583930 ECM1Q16610 540 aa3.78□□□□□ -1.8
CCDC178-213ENST00000583930 DZIP1LQ8IYY4 767 aaKnown RBP3.78□□□□□ -1.8
CCDC178-213ENST00000583930 GRAPLQ8TC17 118 aaPredicted RBP3.78□□□□□ -1.8
CCDC178-213ENST00000583930 GCC1Q96CN9 775 aa3.78□□□□□ -1.8
CCDC178-213ENST00000583930 SRCIN1Q9C0H9 1055 aa3.78□□□□□ -1.8
CCDC178-213ENST00000583930 LEMD3Q9Y2U8 911 aa3.78□□□□□ -1.8
CCDC178-213ENST00000583930 ATP6V0A2Q9Y487 856 aa3.78□□□□□ -1.8
CCDC178-213ENST00000583930 PARP3Q9Y6F1 533 aa3.78□□□□□ -1.8
CCDC178-213ENST00000583930 TMEM229AB2RXF0 380 aa3.78□□□□□ -1.8
CCDC178-213ENST00000583930 ZNF16P17020 682 aaPredicted RBP3.78□□□□□ -1.8
CCDC178-213ENST00000583930 ALDH1B1P30837 517 aa3.78□□□□□ -1.8
CCDC178-213ENST00000583930 TRIM32Q13049 653 aa3.78□□□□□ -1.8
CCDC178-213ENST00000583930 CNGB1Q14028 1251 aaPredicted RBP3.78□□□□□ -1.8
CCDC178-213ENST00000583930 HSP90AB4PQ58FF6 505 aa3.78□□□□□ -1.8
CCDC178-213ENST00000583930 C9orf131Q5VYM1 1079 aa3.78□□□□□ -1.8
CCDC178-213ENST00000583930 TBC1D9BQ66K14 1250 aa3.78□□□□□ -1.8
CCDC178-213ENST00000583930 ATCAYQ86WG3 371 aa3.78□□□□□ -1.8
CCDC178-213ENST00000583930 ERC1Q8IUD2 1116 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms