RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 HOXD10P28358 340 aa25.4■■□□□ 1.66
SRSF1-206ENST00000583741 ADORA1P30542 326 aa25.4■■□□□ 1.66
SRSF1-206ENST00000583741 RGS3P49796 1198 aa25.4■■□□□ 1.66
SRSF1-206ENST00000583741 CXCL11O14625 94 aa25.4■■□□□ 1.66
SRSF1-206ENST00000583741 SEMA3EO15041 775 aa25.4■■□□□ 1.66
SRSF1-206ENST00000583741 SLURP2P0DP57 97 aa25.4■■□□□ 1.66
SRSF1-206ENST00000583741 PRKCZQ05513 592 aa25.4■■□□□ 1.66
SRSF1-206ENST00000583741 SH3BP5LQ7L8J4 393 aa25.4■■□□□ 1.66
SRSF1-206ENST00000583741 SCYL3Q8IZE3 742 aa25.4■■□□□ 1.66
SRSF1-206ENST00000583741 IDI2Q9BXS1 227 aa25.4■■□□□ 1.66
SRSF1-206ENST00000583741 GAKO14976 1311 aa25.39■■□□□ 1.66
SRSF1-206ENST00000583741 LRRFIP2Q9Y608 721 aaKnown RBP25.39■■□□□ 1.65
SRSF1-206ENST00000583741 A0A0G2JLL6 359 aaPredicted RBP25.38■■□□□ 1.65
SRSF1-206ENST00000583741 CCL5P13501 91 aa25.38■■□□□ 1.65
SRSF1-206ENST00000583741 PTPRAP18433 802 aa25.38■■□□□ 1.65
SRSF1-206ENST00000583741 IL15P40933 162 aaPredicted RBP25.38■■□□□ 1.65
SRSF1-206ENST00000583741 CCDC102BQ68D86 513 aa25.38■■□□□ 1.65
SRSF1-206ENST00000583741 PRRT2Q7Z6L0 340 aaPredicted RBP25.38■■□□□ 1.65
SRSF1-206ENST00000583741 UBE2Q1Q7Z7E8 422 aa25.38■■□□□ 1.65
SRSF1-206ENST00000583741 ZHX2Q9Y6X8 837 aa25.38■■□□□ 1.65
SRSF1-206ENST00000583741 ENTPD3O75355 529 aa25.37■■□□□ 1.65
SRSF1-206ENST00000583741 GJA8P48165 433 aa25.37■■□□□ 1.65
SRSF1-206ENST00000583741 RASGRF1Q13972 1273 aa25.37■■□□□ 1.65
SRSF1-206ENST00000583741 GABRQQ9UN88 632 aa25.37■■□□□ 1.65
SRSF1-206ENST00000583741 DDTLA6NHG4 134 aaPredicted RBP25.36■■□□□ 1.65
SRSF1-206ENST00000583741 GJB1P08034 283 aa25.36■■□□□ 1.65
SRSF1-206ENST00000583741 FCGRTP55899 365 aa25.36■■□□□ 1.65
SRSF1-206ENST00000583741 CHRDL2Q6WN34 429 aa25.36■■□□□ 1.65
SRSF1-206ENST00000583741 RNF208Q9H0X6 261 aa25.36■■□□□ 1.65
SRSF1-206ENST00000583741 DDX4Q9NQI0 724 aaKnown RBP25.36■■□□□ 1.65
SRSF1-206ENST00000583741 PICK1Q9NRD5 415 aa25.36■■□□□ 1.65
SRSF1-206ENST00000583741 AFG3L2Q9Y4W6 797 aa25.36■■□□□ 1.65
SRSF1-206ENST00000583741 LAMA3Q16787 3333 aa25.35■■□□□ 1.65
SRSF1-206ENST00000583741 ZBTB22O15209 634 aa25.35■■□□□ 1.65
SRSF1-206ENST00000583741 NKX2-3Q8TAU0 364 aa25.35■■□□□ 1.65
SRSF1-206ENST00000583741 DPF3Q92784 378 aa25.35■■□□□ 1.65
SRSF1-206ENST00000583741 COPRSQ9NQ92 184 aa25.35■■□□□ 1.65
SRSF1-206ENST00000583741 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.35■■□□□ 1.65
SRSF1-206ENST00000583741 BIN2Q9UBW5 565 aaPredicted RBP25.35■■□□□ 1.65
SRSF1-206ENST00000583741 NOB1Q9ULX3 412 aaKnown RBP25.35■■□□□ 1.65
SRSF1-206ENST00000583741 MAP3K10Q02779 954 aa25.34■■□□□ 1.65
SRSF1-206ENST00000583741 DZIP1Q86YF9 867 aaKnown RBP25.34■■□□□ 1.65
SRSF1-206ENST00000583741 ZSCAN29Q8IWY8 852 aaPredicted RBP25.34■■□□□ 1.65
SRSF1-206ENST00000583741 ZGPATQ8N5A5 531 aaKnown RBP25.34■■□□□ 1.65
SRSF1-206ENST00000583741 TIMM10P62072 90 aa25.34■■□□□ 1.65
SRSF1-206ENST00000583741 GADL1Q6ZQY3 521 aa25.34■■□□□ 1.65
SRSF1-206ENST00000583741 FASTKD5Q7L8L6 764 aaKnown RBP25.34■■□□□ 1.65
SRSF1-206ENST00000583741 MEIS3Q99687 375 aa25.34■■□□□ 1.65
SRSF1-206ENST00000583741 ABCF2Q9UG63 623 aa25.34■■□□□ 1.65
SRSF1-206ENST00000583741 SLAIN1Q8ND83 568 aa25.33■■□□□ 1.65
SRSF1-206ENST00000583741 UNC93B1Q9H1C4 597 aa25.33■■□□□ 1.65
SRSF1-206ENST00000583741 DOCK3Q8IZD9 2030 aa25.32■■□□□ 1.64
SRSF1-206ENST00000583741 PDS5AQ29RF7 1337 aaKnown RBP25.32■■□□□ 1.64
SRSF1-206ENST00000583741 BTDP43251 543 aa25.32■■□□□ 1.64
SRSF1-206ENST00000583741 RARSP54136 660 aaKnown RBP25.32■■□□□ 1.64
SRSF1-206ENST00000583741 UBXN2AP68543 259 aa25.32■■□□□ 1.64
SRSF1-206ENST00000583741 PICALMQ13492 652 aa25.32■■□□□ 1.64
SRSF1-206ENST00000583741 CCDC84Q86UT8 332 aaPredicted RBP25.32■■□□□ 1.64
SRSF1-206ENST00000583741 RBM27Q9P2N5 1060 aaKnown RBP25.32■■□□□ 1.64
SRSF1-206ENST00000583741 MROH7-TTC4A0A0A0MT08 1334 aa25.31■■□□□ 1.64
SRSF1-206ENST00000583741 TRIM75PA6NK02 468 aa25.31■■□□□ 1.64
SRSF1-206ENST00000583741 U2AF1L4Q8WU68 220 aaKnown RBP25.31■■□□□ 1.64
SRSF1-206ENST00000583741 FAM163AQ96GL9 167 aaPredicted RBP25.31■■□□□ 1.64
SRSF1-206ENST00000583741 SLC45A1Q9Y2W3 748 aa25.31■■□□□ 1.64
SRSF1-206ENST00000583741 CTNND1O60716 968 aaKnown RBP25.3■■□□□ 1.64
SRSF1-206ENST00000583741 ELNP15502 786 aa25.3■■□□□ 1.64
SRSF1-206ENST00000583741 FLT3LGP49771 235 aa25.3■■□□□ 1.64
SRSF1-206ENST00000583741 ZNF384Q8TF68 577 aa25.3■■□□□ 1.64
SRSF1-206ENST00000583741 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.3■■□□□ 1.64
SRSF1-206ENST00000583741 ATAD5Q96QE3 1844 aa25.3■■□□□ 1.64
SRSF1-206ENST00000583741 A0A1B0GUL7 405 aa25.29■■□□□ 1.64
SRSF1-206ENST00000583741 ADCY3O60266 1144 aa25.29■■□□□ 1.64
SRSF1-206ENST00000583741 RHBDL3P58872 404 aa25.29■■□□□ 1.64
SRSF1-206ENST00000583741 API5Q9BZZ5 524 aaKnown RBP25.29■■□□□ 1.64
SRSF1-206ENST00000583741 RRP1P56182 461 aaKnown RBP25.28■■□□□ 1.64
SRSF1-206ENST00000583741 MECOMQ03112 1051 aa25.28■■□□□ 1.64
SRSF1-206ENST00000583741 SLF2Q8IX21 1173 aa25.28■■□□□ 1.64
SRSF1-206ENST00000583741 SMCR8Q8TEV9 937 aaPredicted RBP25.28■■□□□ 1.64
SRSF1-206ENST00000583741 XAGE2Q96GT9 111 aa25.28■■□□□ 1.64
SRSF1-206ENST00000583741 HTATIP2Q9BUP3 242 aa25.28■■□□□ 1.64
SRSF1-206ENST00000583741 LOC285556D6RIA3 1793 aa25.28■■□□□ 1.64
SRSF1-206ENST00000583741 FAM196BA6NMK8 535 aa25.28■■□□□ 1.64
SRSF1-206ENST00000583741 TNPO2O14787 897 aaKnown RBP25.28■■□□□ 1.64
SRSF1-206ENST00000583741 BCAR3O75815 825 aa25.28■■□□□ 1.64
SRSF1-206ENST00000583741 FARP2O94887 1054 aaPredicted RBP25.28■■□□□ 1.64
SRSF1-206ENST00000583741 INHAP05111 366 aa25.28■■□□□ 1.64
SRSF1-206ENST00000583741 TFCP2Q12800 502 aa25.28■■□□□ 1.64
SRSF1-206ENST00000583741 HDAC5Q9UQL6 1122 aa25.28■■□□□ 1.64
SRSF1-206ENST00000583741 GPR75-ASB3A0A0A6YYF3 556 aa25.27■■□□□ 1.64
SRSF1-206ENST00000583741 SGPL1O95470 568 aa25.27■■□□□ 1.64
SRSF1-206ENST00000583741 TREML2Q5T2D2 321 aa25.27■■□□□ 1.64
SRSF1-206ENST00000583741 SPTY2D1Q68D10 685 aaPredicted RBP25.27■■□□□ 1.64
SRSF1-206ENST00000583741 AGTPBP1Q9UPW5 1226 aa25.27■■□□□ 1.64
SRSF1-206ENST00000583741 NEFLP07196 543 aa25.26■■□□□ 1.63
SRSF1-206ENST00000583741 PI16Q6UXB8 463 aa25.26■■□□□ 1.63
SRSF1-206ENST00000583741 ANKRD13CQ8N6S4 541 aa25.26■■□□□ 1.63
SRSF1-206ENST00000583741 PRO3102Q9H379 93 aa25.26■■□□□ 1.63
SRSF1-206ENST00000583741 SRGAP3O43295 1099 aa25.25■■□□□ 1.63
SRSF1-206ENST00000583741 IRF5Q13568 498 aa25.25■■□□□ 1.63
SRSF1-206ENST00000583741 MVPQ14764 893 aaKnown RBP25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms