RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 ACSBG1Q96GR2 724 aa6.39□□□□□ -1.39
VAPA-206ENST00000583475 ATXN3LQ9H3M9 355 aa6.39□□□□□ -1.39
VAPA-206ENST00000583475 C1GALT1Q9NS00 363 aa6.39□□□□□ -1.39
VAPA-206ENST00000583475 PRKAG2Q9UGJ0 569 aa6.39□□□□□ -1.39
VAPA-206ENST00000583475 WDR64B1ANS9 1081 aa6.38□□□□□ -1.39
VAPA-206ENST00000583475 ZNF16P17020 682 aaPredicted RBP6.38□□□□□ -1.39
VAPA-206ENST00000583475 RPS26P62854 115 aaKnown RBP6.38□□□□□ -1.39
VAPA-206ENST00000583475 HNRNPUQ00839 825 aaKnown RBP eCLIP6.38□□□□□ -1.39
VAPA-206ENST00000583475 RING1Q06587 406 aa6.38□□□□□ -1.39
VAPA-206ENST00000583475 TTLL4Q14679 1199 aa6.38□□□□□ -1.39
VAPA-206ENST00000583475 AGMOQ6ZNB7 445 aa6.38□□□□□ -1.39
VAPA-206ENST00000583475 CRELD1Q96HD1 420 aa6.38□□□□□ -1.39
VAPA-206ENST00000583475 NOC4LQ9BVI4 516 aaKnown RBP6.38□□□□□ -1.39
VAPA-206ENST00000583475 MRS2Q9HD23 443 aa6.38□□□□□ -1.39
VAPA-206ENST00000583475 VTI1BQ9UEU0 232 aa6.38□□□□□ -1.39
VAPA-206ENST00000583475 MED26O95402 600 aa6.37□□□□□ -1.39
VAPA-206ENST00000583475 TGFB1P01137 390 aa6.37□□□□□ -1.39
VAPA-206ENST00000583475 NEFMP07197 916 aa6.37□□□□□ -1.39
VAPA-206ENST00000583475 LIG3P49916 1009 aa6.37□□□□□ -1.39
VAPA-206ENST00000583475 MRPL58Q14197 206 aaKnown RBP6.37□□□□□ -1.39
VAPA-206ENST00000583475 INPP5AQ14642 412 aa6.37□□□□□ -1.39
VAPA-206ENST00000583475 MAP3K11Q16584 847 aa6.37□□□□□ -1.39
VAPA-206ENST00000583475 ZAR1Q86SH2 424 aa6.37□□□□□ -1.39
VAPA-206ENST00000583475 C12orf40Q86WS4 652 aa6.37□□□□□ -1.39
VAPA-206ENST00000583475 SMYD4Q8IYR2 804 aaPredicted RBP6.37□□□□□ -1.39
VAPA-206ENST00000583475 FBXL6Q8N531 539 aa6.37□□□□□ -1.39
VAPA-206ENST00000583475 RNF214Q8ND24 703 aa6.37□□□□□ -1.39
VAPA-206ENST00000583475 GAL3ST3Q96A11 431 aa6.37□□□□□ -1.39
VAPA-206ENST00000583475 PIDD1Q9HB75 910 aa6.37□□□□□ -1.39
VAPA-206ENST00000583475 LGR6Q9HBX8 967 aa6.37□□□□□ -1.39
VAPA-206ENST00000583475 PCDHA4Q9UN74 947 aa6.37□□□□□ -1.39
VAPA-206ENST00000583475 DAGLAQ9Y4D2 1042 aa6.37□□□□□ -1.39
VAPA-206ENST00000583475 PCDHB5Q9Y5E4 795 aa6.37□□□□□ -1.39
VAPA-206ENST00000583475 CSADQ9Y600 493 aa6.37□□□□□ -1.39
VAPA-206ENST00000583475 DCDC2CA8MYV0 355 aa6.36□□□□□ -1.39
VAPA-206ENST00000583475 HCLS1P14317 486 aaPredicted RBP6.36□□□□□ -1.39
VAPA-206ENST00000583475 NTF4P34130 210 aa6.36□□□□□ -1.39
VAPA-206ENST00000583475 PPM1JQ5JR12 505 aa6.36□□□□□ -1.39
VAPA-206ENST00000583475 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.36□□□□□ -1.39
VAPA-206ENST00000583475 ISL2Q96A47 359 aa6.36□□□□□ -1.39
VAPA-206ENST00000583475 TBC1D32Q96NH3 1257 aa6.36□□□□□ -1.39
VAPA-206ENST00000583475 PCOLCE2Q9UKZ9 415 aa6.36□□□□□ -1.39
VAPA-206ENST00000583475 HYAL3O43820 417 aaPredicted RBP6.35□□□□□ -1.39
VAPA-206ENST00000583475 RNGTTO60942 597 aaKnown RBP6.35□□□□□ -1.39
VAPA-206ENST00000583475 TFE3P19532 575 aaPredicted RBP6.35□□□□□ -1.39
VAPA-206ENST00000583475 CDK8P49336 464 aa6.35□□□□□ -1.39
VAPA-206ENST00000583475 ARTNQ5T4W7 220 aa6.35□□□□□ -1.39
VAPA-206ENST00000583475 PHC3Q8NDX5 983 aa6.35□□□□□ -1.39
VAPA-206ENST00000583475 ATG3Q9NT62 314 aa6.35□□□□□ -1.39
VAPA-206ENST00000583475 TLR6Q9Y2C9 796 aa6.35□□□□□ -1.39
VAPA-206ENST00000583475 FAM170BA6NMN3 283 aa6.34□□□□□ -1.39
VAPA-206ENST00000583475 RLBP1P12271 317 aa6.34□□□□□ -1.39
VAPA-206ENST00000583475 ITGAEP38570 1179 aa6.34□□□□□ -1.39
VAPA-206ENST00000583475 LRP8Q14114 963 aa6.34□□□□□ -1.39
VAPA-206ENST00000583475 SEPT6Q14141 434 aa6.34□□□□□ -1.39
VAPA-206ENST00000583475 LDLRAD1Q5T700 205 aa6.34□□□□□ -1.39
VAPA-206ENST00000583475 LRFN4Q6PJG9 635 aa6.34□□□□□ -1.39
VAPA-206ENST00000583475 OGFOD3Q6PK18 319 aa6.34□□□□□ -1.39
VAPA-206ENST00000583475 CYFIP1Q7L576 1253 aa6.34□□□□□ -1.39
VAPA-206ENST00000583475 PLPPR2Q96GM1 343 aa6.34□□□□□ -1.39
VAPA-206ENST00000583475 PSMG3-AS1Q96PY0 264 aa6.34□□□□□ -1.39
VAPA-206ENST00000583475 RSRP1Q9BUV0 290 aa6.34□□□□□ -1.39
VAPA-206ENST00000583475 SCO2A0A1W2PP80 73 aa6.33□□□□□ -1.4
VAPA-206ENST00000583475 RBM47A0AV96 593 aaKnown RBP6.33□□□□□ -1.4
VAPA-206ENST00000583475 FANCGO15287 622 aa6.33□□□□□ -1.4
VAPA-206ENST00000583475 COBLO75128 1261 aa6.33□□□□□ -1.4
VAPA-206ENST00000583475 SSTR4P31391 388 aa6.33□□□□□ -1.4
VAPA-206ENST00000583475 CD97P48960 835 aa6.33□□□□□ -1.4
VAPA-206ENST00000583475 ZBTB37Q5TC79 503 aa6.33□□□□□ -1.4
VAPA-206ENST00000583475 UBE3DQ7Z6J8 389 aa6.33□□□□□ -1.4
VAPA-206ENST00000583475 GIMAP7Q8NHV1 300 aa6.33□□□□□ -1.4
VAPA-206ENST00000583475 OSBPL1AQ9BXW6 950 aa6.33□□□□□ -1.4
VAPA-206ENST00000583475 PIM2Q9P1W9 311 aa6.33□□□□□ -1.4
VAPA-206ENST00000583475 SNCAIPQ9Y6H5 919 aa6.33□□□□□ -1.4
VAPA-206ENST00000583475 F6X3S4 739 aa6.32□□□□□ -1.4
VAPA-206ENST00000583475 GFRA2O00451 464 aa6.32□□□□□ -1.4
VAPA-206ENST00000583475 HOXA10P31260 410 aaPredicted RBP6.32□□□□□ -1.4
VAPA-206ENST00000583475 CDK5R2Q13319 367 aa6.32□□□□□ -1.4
VAPA-206ENST00000583475 INTS5Q6P9B9 1019 aaKnown RBP6.32□□□□□ -1.4
VAPA-206ENST00000583475 ZNF765Q7L2R6 523 aa6.32□□□□□ -1.4
VAPA-206ENST00000583475 HDXQ7Z353 690 aa6.32□□□□□ -1.4
VAPA-206ENST00000583475 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.32□□□□□ -1.4
VAPA-206ENST00000583475 ELMO3Q96BJ8 720 aa6.32□□□□□ -1.4
VAPA-206ENST00000583475 METTL22Q9BUU2 404 aaPredicted RBP6.32□□□□□ -1.4
VAPA-206ENST00000583475 SSU72Q9NP77 194 aaKnown RBP6.32□□□□□ -1.4
VAPA-206ENST00000583475 ZFP64Q9NPA5 681 aa6.32□□□□□ -1.4
VAPA-206ENST00000583475 LEMD3Q9Y2U8 911 aa6.32□□□□□ -1.4
VAPA-206ENST00000583475 LMNB1P20700 586 aa6.31□□□□□ -1.4
VAPA-206ENST00000583475 CAMK2GQ13555 558 aaPredicted RBP6.31□□□□□ -1.4
VAPA-206ENST00000583475 CPSF6Q16630 551 aaKnown RBP eCLIP6.31□□□□□ -1.4
VAPA-206ENST00000583475 WIPI1Q5MNZ9 446 aaPredicted RBP6.31□□□□□ -1.4
VAPA-206ENST00000583475 DUSP27Q5VZP5 1158 aa6.31□□□□□ -1.4
VAPA-206ENST00000583475 RELL1Q8IUW5 271 aa6.31□□□□□ -1.4
VAPA-206ENST00000583475 JARID2Q92833 1246 aaPredicted RBP6.31□□□□□ -1.4
VAPA-206ENST00000583475 TMEM74Q96NL1 305 aa6.31□□□□□ -1.4
VAPA-206ENST00000583475 MIR1-1HGQ9H1L0 117 aa6.31□□□□□ -1.4
VAPA-206ENST00000583475 KIAA1324LA8MWY0 1029 aaPredicted RBP6.3□□□□□ -1.4
VAPA-206ENST00000583475 PF4P02776 101 aa6.3□□□□□ -1.4
VAPA-206ENST00000583475 FOSL1P15407 271 aa6.3□□□□□ -1.4
VAPA-206ENST00000583475 GBP2P32456 591 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms