RNA–Protein interactions for RNA: ENST00000583380.5

SKA2-207, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 5 BASIC

Gene SKA2, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-207ENST00000583380 PAPOLBQ9NRJ5 636 aaKnown RBP10.62□□□□□ -0.71
SKA2-207ENST00000583380 KIAA1468Q9P260 1216 aa10.62□□□□□ -0.71
SKA2-207ENST00000583380 CIDEBQ9UHD4 219 aa10.62□□□□□ -0.71
SKA2-207ENST00000583380 DDX20Q9UHI6 824 aaKnown RBP10.62□□□□□ -0.71
SKA2-207ENST00000583380 STAG3Q9UJ98 1225 aa10.62□□□□□ -0.71
SKA2-207ENST00000583380 FAM184BQ9ULE4 1060 aa10.62□□□□□ -0.71
SKA2-207ENST00000583380 TRPC6Q9Y210 931 aa10.62□□□□□ -0.71
SKA2-207ENST00000583380 SNX14Q9Y5W7 946 aa10.62□□□□□ -0.71
SKA2-207ENST00000583380 SALL3Q9BXA9 1300 aa10.61□□□□□ -0.71
SKA2-207ENST00000583380 RASSF10A6NK89 507 aa10.61□□□□□ -0.71
SKA2-207ENST00000583380 CREB3O43889 395 aa10.61□□□□□ -0.71
SKA2-207ENST00000583380 SERPINC1P01008 464 aa10.61□□□□□ -0.71
SKA2-207ENST00000583380 PENKP01210 267 aaPredicted RBP10.61□□□□□ -0.71
SKA2-207ENST00000583380 USP14P54578 494 aa10.61□□□□□ -0.71
SKA2-207ENST00000583380 MYL5Q02045 173 aa10.61□□□□□ -0.71
SKA2-207ENST00000583380 LBRQ14739 615 aaKnown RBP10.61□□□□□ -0.71
SKA2-207ENST00000583380 GLE1Q53GS7 698 aaKnown RBP10.61□□□□□ -0.71
SKA2-207ENST00000583380 ADALQ6DHV7 355 aa10.61□□□□□ -0.71
SKA2-207ENST00000583380 PRPF40BQ6NWY9 871 aaKnown RBP10.61□□□□□ -0.71
SKA2-207ENST00000583380 MIS18BP1Q6P0N0 1132 aa10.61□□□□□ -0.71
SKA2-207ENST00000583380 KDM7AQ6ZMT4 941 aa10.61□□□□□ -0.71
SKA2-207ENST00000583380 ZNF662Q6ZS27 426 aa10.61□□□□□ -0.71
SKA2-207ENST00000583380 FUKQ8N0W3 1084 aa10.61□□□□□ -0.71
SKA2-207ENST00000583380 LRRN4CLQ8ND94 238 aa10.61□□□□□ -0.71
SKA2-207ENST00000583380 KCNG4Q8TDN1 519 aa10.61□□□□□ -0.71
SKA2-207ENST00000583380 MRPS27Q92552 414 aaKnown RBP10.61□□□□□ -0.71
SKA2-207ENST00000583380 CUL5Q93034 780 aa10.61□□□□□ -0.71
SKA2-207ENST00000583380 DHX58Q96C10 678 aa10.61□□□□□ -0.71
SKA2-207ENST00000583380 GOPCQ9HD26 462 aa10.61□□□□□ -0.71
SKA2-207ENST00000583380 CEMIPQ8WUJ3 1361 aa10.61□□□□□ -0.71
SKA2-207ENST00000583380 LRRD1A4D1F6 860 aa10.6□□□□□ -0.71
SKA2-207ENST00000583380 HMGB1P1B2RPK0 211 aaPredicted RBP10.6□□□□□ -0.71
SKA2-207ENST00000583380 B4DLN1 442 aa10.6□□□□□ -0.71
SKA2-207ENST00000583380 H3BQV1 296 aa10.6□□□□□ -0.71
SKA2-207ENST00000583380 HSF2BPO75031 334 aa10.6□□□□□ -0.71
SKA2-207ENST00000583380 SMNDC1O75940 238 aaKnown RBP eCLIP10.6□□□□□ -0.71
SKA2-207ENST00000583380 NPTXRO95502 500 aa10.6□□□□□ -0.71
SKA2-207ENST00000583380 GSTA2P09210 222 aa10.6□□□□□ -0.71
SKA2-207ENST00000583380 CCND1P24385 295 aa10.6□□□□□ -0.71
SKA2-207ENST00000583380 TNFRSF8P28908 595 aa10.6□□□□□ -0.71
SKA2-207ENST00000583380 MRPS25P82663 173 aaKnown RBP10.6□□□□□ -0.71
SKA2-207ENST00000583380 BLMHQ13867 455 aa10.6□□□□□ -0.71
SKA2-207ENST00000583380 TRIM14Q14142 442 aa10.6□□□□□ -0.71
SKA2-207ENST00000583380 ARID5BQ14865 1188 aa10.6□□□□□ -0.71
SKA2-207ENST00000583380 SLC4A8Q2Y0W8 1093 aa10.6□□□□□ -0.71
SKA2-207ENST00000583380 IFFO2Q5TF58 517 aa10.6□□□□□ -0.71
SKA2-207ENST00000583380 SPECC1LQ69YQ0 1117 aa10.6□□□□□ -0.71
SKA2-207ENST00000583380 KLHL10Q6JEL2 608 aa10.6□□□□□ -0.71
SKA2-207ENST00000583380 C11orf57Q6ZUT1 292 aaPredicted RBP10.6□□□□□ -0.71
SKA2-207ENST00000583380 FAM114A1Q8IWE2 563 aa10.6□□□□□ -0.71
SKA2-207ENST00000583380 LMNTD2Q8IXW0 634 aa10.6□□□□□ -0.71
SKA2-207ENST00000583380 EIF1ADQ8N9N8 165 aaKnown RBP10.6□□□□□ -0.71
SKA2-207ENST00000583380 SPDYE1Q8NFV5 336 aaPredicted RBP10.6□□□□□ -0.71
SKA2-207ENST00000583380 LZTS2Q9BRK4 669 aa10.6□□□□□ -0.71
SKA2-207ENST00000583380 VCXQ9H320 206 aa10.6□□□□□ -0.71
SKA2-207ENST00000583380 CD248Q9HCU0 757 aa10.6□□□□□ -0.71
SKA2-207ENST00000583380 LUC7LQ9NQ29 371 aaKnown RBP10.6□□□□□ -0.71
SKA2-207ENST00000583380 BLOC1S6Q9UL45 172 aa10.6□□□□□ -0.71
SKA2-207ENST00000583380 PALD1Q9ULE6 856 aa10.6□□□□□ -0.71
SKA2-207ENST00000583380 SH3TC1Q8TE82 1336 aa10.59□□□□□ -0.71
SKA2-207ENST00000583380 CD109Q6YHK3 1445 aa10.59□□□□□ -0.71
SKA2-207ENST00000583380 CEP104O60308 925 aa10.59□□□□□ -0.71
SKA2-207ENST00000583380 GNAI2P04899 355 aa10.59□□□□□ -0.71
SKA2-207ENST00000583380 SLC3A2P08195 630 aaKnown RBP10.59□□□□□ -0.71
SKA2-207ENST00000583380 TBX2Q13207 712 aaPredicted RBP10.59□□□□□ -0.71
SKA2-207ENST00000583380 IFI16Q16666 785 aaKnown RBP10.59□□□□□ -0.71
SKA2-207ENST00000583380 SGSM1Q2NKQ1 1148 aa10.59□□□□□ -0.71
SKA2-207ENST00000583380 TWISTNBQ3B726 338 aaPredicted RBP10.59□□□□□ -0.71
SKA2-207ENST00000583380 TPRNQ4KMQ1 711 aa10.59□□□□□ -0.71
SKA2-207ENST00000583380 RRP12Q5JTH9 1297 aaKnown RBP10.59□□□□□ -0.71
SKA2-207ENST00000583380 SPECC1Q5M775 1068 aa10.59□□□□□ -0.71
SKA2-207ENST00000583380 RNF187Q5TA31 235 aaPredicted RBP10.59□□□□□ -0.71
SKA2-207ENST00000583380 MSL1Q68DK7 614 aa10.59□□□□□ -0.71
SKA2-207ENST00000583380 DPY19L2Q6NUT2 758 aa10.59□□□□□ -0.71
SKA2-207ENST00000583380 CD302Q8IX05 232 aa10.59□□□□□ -0.71
SKA2-207ENST00000583380 ANKS4BQ8N8V4 417 aa10.59□□□□□ -0.71
SKA2-207ENST00000583380 ENGASEQ8NFI3 743 aa10.59□□□□□ -0.71
SKA2-207ENST00000583380 B4GALNT2Q8NHY0 566 aa10.59□□□□□ -0.71
SKA2-207ENST00000583380 C17orf50Q8WW18 174 aa10.59□□□□□ -0.71
SKA2-207ENST00000583380 CNKSR1Q969H4 720 aa10.59□□□□□ -0.71
SKA2-207ENST00000583380 ACSBG1Q96GR2 724 aa10.59□□□□□ -0.71
SKA2-207ENST00000583380 AGAP3Q96P47 875 aa10.59□□□□□ -0.71
SKA2-207ENST00000583380 TRAPPC9Q96Q05 1148 aa10.59□□□□□ -0.71
SKA2-207ENST00000583380 CTAGE1Q96RT6 745 aa10.59□□□□□ -0.71
SKA2-207ENST00000583380 NAP1L3Q99457 506 aaPredicted RBP10.59□□□□□ -0.71
SKA2-207ENST00000583380 VCX3BQ9H321 246 aa10.59□□□□□ -0.71
SKA2-207ENST00000583380 PRDM16Q9HAZ2 1276 aa10.59□□□□□ -0.71
SKA2-207ENST00000583380 VCX3AQ9NNX9 186 aa10.59□□□□□ -0.71
SKA2-207ENST00000583380 TMCO1Q9UM00 188 aa10.59□□□□□ -0.71
SKA2-207ENST00000583380 WDR37Q9Y2I8 494 aa10.59□□□□□ -0.71
SKA2-207ENST00000583380 C15orf41Q9Y2V0 281 aa10.59□□□□□ -0.71
SKA2-207ENST00000583380 PNPLA6Q8IY17 1366 aa10.59□□□□□ -0.71
SKA2-207ENST00000583380 GLI2P10070 1586 aa10.59□□□□□ -0.71
SKA2-207ENST00000583380 ZC3H13Q5T200 1668 aaKnown RBP10.59□□□□□ -0.71
SKA2-207ENST00000583380 KIAA0556O60303 1618 aa10.58□□□□□ -0.72
SKA2-207ENST00000583380 ZSCAN9O15535 394 aaPredicted RBP10.58□□□□□ -0.72
SKA2-207ENST00000583380 DIAPH1O60610 1272 aaKnown RBP10.58□□□□□ -0.72
SKA2-207ENST00000583380 E2F6O75461 281 aa10.58□□□□□ -0.72
SKA2-207ENST00000583380 YEATS4O95619 227 aa10.58□□□□□ -0.72
SKA2-207ENST00000583380 VSNL1P62760 191 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms