RNA–Protein interactions for RNA: ENST00000583361.1

PRKCA-204, Transcript of protein kinase C alpha, humanhuman

TSL 3

Gene PRKCA, Length 519 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-204ENST00000583361 TEX11Q8IYF3 940 aa9.67□□□□□ -0.86
PRKCA-204ENST00000583361 CLASRPQ8N2M8 674 aaKnown RBP9.67□□□□□ -0.86
PRKCA-204ENST00000583361 RHPN1Q8TCX5 695 aa9.67□□□□□ -0.86
PRKCA-204ENST00000583361 ZNF296Q8WUU4 475 aaPredicted RBP9.67□□□□□ -0.86
PRKCA-204ENST00000583361 NSUN4Q96CB9 384 aaKnown RBP9.67□□□□□ -0.86
PRKCA-204ENST00000583361 EAF2Q96CJ1 260 aaPredicted RBP9.67□□□□□ -0.86
PRKCA-204ENST00000583361 GPR75-ASB3A0A0A6YYF3 556 aa9.66□□□□□ -0.86
PRKCA-204ENST00000583361 GPR25O00155 361 aa9.66□□□□□ -0.86
PRKCA-204ENST00000583361 IGF2BP3O00425 579 aaKnown RBP eCLIP9.66□□□□□ -0.86
PRKCA-204ENST00000583361 ZBTB22O15209 634 aa9.66□□□□□ -0.86
PRKCA-204ENST00000583361 FKTNO75072 461 aa9.66□□□□□ -0.86
PRKCA-204ENST00000583361 ENTPD3O75355 529 aa9.66□□□□□ -0.86
PRKCA-204ENST00000583361 BAG3O95817 575 aa9.66□□□□□ -0.86
PRKCA-204ENST00000583361 CYP2E1P05181 493 aaPredicted RBP9.66□□□□□ -0.86
PRKCA-204ENST00000583361 GTF2A2P52657 109 aa9.66□□□□□ -0.86
PRKCA-204ENST00000583361 PDE3AQ14432 1141 aa9.66□□□□□ -0.86
PRKCA-204ENST00000583361 TAF1CQ15572 869 aaPredicted RBP9.66□□□□□ -0.86
PRKCA-204ENST00000583361 CTU1Q7Z7A3 348 aaKnown RBP9.66□□□□□ -0.86
PRKCA-204ENST00000583361 ERO1BQ86YB8 467 aa9.66□□□□□ -0.86
PRKCA-204ENST00000583361 KIF1BPQ96EK5 621 aa9.66□□□□□ -0.86
PRKCA-204ENST00000583361 FAM163AQ96GL9 167 aaPredicted RBP9.66□□□□□ -0.86
PRKCA-204ENST00000583361 IDI2Q9BXS1 227 aa9.66□□□□□ -0.86
PRKCA-204ENST00000583361 TRIM34Q9BYJ4 488 aa9.66□□□□□ -0.86
PRKCA-204ENST00000583361 ZBTB40Q9NUA8 1239 aa9.66□□□□□ -0.86
PRKCA-204ENST00000583361 AATFQ9NY61 560 aaKnown RBP eCLIP9.66□□□□□ -0.86
PRKCA-204ENST00000583361 SNCAIPQ9Y6H5 919 aa9.66□□□□□ -0.86
PRKCA-204ENST00000583361 NDUFB9Q9Y6M9 179 aa9.66□□□□□ -0.86
PRKCA-204ENST00000583361 NAV1Q8NEY1 1877 aa9.66□□□□□ -0.86
PRKCA-204ENST00000583361 PHIPQ8WWQ0 1821 aa9.66□□□□□ -0.86
PRKCA-204ENST00000583361 DDTLA6NHG4 134 aaPredicted RBP9.65□□□□□ -0.86
PRKCA-204ENST00000583361 SPDYE5A6NIY4 337 aa9.65□□□□□ -0.86
PRKCA-204ENST00000583361 SNAPC2Q13487 334 aa9.65□□□□□ -0.86
PRKCA-204ENST00000583361 SH3RF3Q8TEJ3 882 aaPredicted RBP9.65□□□□□ -0.86
PRKCA-204ENST00000583361 DNAJC2Q99543 621 aaKnown RBP9.65□□□□□ -0.86
PRKCA-204ENST00000583361 R3HDMLQ9H3Y0 253 aa9.65□□□□□ -0.86
PRKCA-204ENST00000583361 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.65□□□□□ -0.86
PRKCA-204ENST00000583361 DDX4Q9NQI0 724 aaKnown RBP9.65□□□□□ -0.86
PRKCA-204ENST00000583361 PICK1Q9NRD5 415 aa9.65□□□□□ -0.86
PRKCA-204ENST00000583361 MGAMO43451 1857 aa9.64□□□□□ -0.87
PRKCA-204ENST00000583361 FAM196BA6NMK8 535 aa9.64□□□□□ -0.87
PRKCA-204ENST00000583361 IRF6O14896 467 aa9.64□□□□□ -0.87
PRKCA-204ENST00000583361 RAB11FIP3O75154 756 aa9.64□□□□□ -0.87
PRKCA-204ENST00000583361 CETPP11597 493 aa9.64□□□□□ -0.87
PRKCA-204ENST00000583361 PLCG2P16885 1265 aa9.64□□□□□ -0.87
PRKCA-204ENST00000583361 CYP7A1P22680 504 aa9.64□□□□□ -0.87
PRKCA-204ENST00000583361 MAP3K12Q12852 859 aa9.64□□□□□ -0.87
PRKCA-204ENST00000583361 CRHR2Q13324 411 aa9.64□□□□□ -0.87
PRKCA-204ENST00000583361 PPIL2Q13356 520 aa9.64□□□□□ -0.87
PRKCA-204ENST00000583361 MAPKAPK5Q8IW41 473 aa9.64□□□□□ -0.87
PRKCA-204ENST00000583361 MAGEB6Q8N7X4 407 aa9.64□□□□□ -0.87
PRKCA-204ENST00000583361 ZNF384Q8TF68 577 aa9.64□□□□□ -0.87
PRKCA-204ENST00000583361 TGFBRAP1Q8WUH2 860 aa9.64□□□□□ -0.87
PRKCA-204ENST00000583361 BRI3BPQ8WY22 251 aa9.64□□□□□ -0.87
PRKCA-204ENST00000583361 ZNF512BQ96KM6 892 aaPredicted RBP9.64□□□□□ -0.87
PRKCA-204ENST00000583361 ZFYVE28Q9HCC9 887 aa9.64□□□□□ -0.87
PRKCA-204ENST00000583361 PIH1D3Q9NQM4 214 aaKnown RBP9.64□□□□□ -0.87
PRKCA-204ENST00000583361 BAZ2AQ9UIF9 1905 aaKnown RBP9.64□□□□□ -0.87
PRKCA-204ENST00000583361 ZSWIM8A7E2V4 1837 aa9.63□□□□□ -0.87
PRKCA-204ENST00000583361 SIPA1L1O43166 1804 aa9.63□□□□□ -0.87
PRKCA-204ENST00000583361 ECM2O94769 699 aaPredicted RBP9.63□□□□□ -0.87
PRKCA-204ENST00000583361 MAP4K4O95819 1239 aaPredicted RBP9.63□□□□□ -0.87
PRKCA-204ENST00000583361 USP5P45974 858 aa9.63□□□□□ -0.87
PRKCA-204ENST00000583361 RHBDL3P58872 404 aa9.63□□□□□ -0.87
PRKCA-204ENST00000583361 PPATQ06203 517 aa9.63□□□□□ -0.87
PRKCA-204ENST00000583361 SLC4A8Q2Y0W8 1093 aa9.63□□□□□ -0.87
PRKCA-204ENST00000583361 SH3BP5LQ7L8J4 393 aa9.63□□□□□ -0.87
PRKCA-204ENST00000583361 SIRT2Q8IXJ6 389 aa9.63□□□□□ -0.87
PRKCA-204ENST00000583361 CRACR2BQ8N4Y2 399 aaPredicted RBP9.63□□□□□ -0.87
PRKCA-204ENST00000583361 MIGA1Q8NAN2 632 aa9.63□□□□□ -0.87
PRKCA-204ENST00000583361 MS4A4AQ96JQ5 239 aa9.63□□□□□ -0.87
PRKCA-204ENST00000583361 PTPN18Q99952 460 aa9.63□□□□□ -0.87
PRKCA-204ENST00000583361 LRRCC1Q9C099 1032 aa9.63□□□□□ -0.87
PRKCA-204ENST00000583361 OSBPL5Q9H0X9 879 aaPredicted RBP9.63□□□□□ -0.87
PRKCA-204ENST00000583361 ANTXR1Q9H6X2 564 aa9.63□□□□□ -0.87
PRKCA-204ENST00000583361 TRIM17Q9Y577 477 aa9.63□□□□□ -0.87
PRKCA-204ENST00000583361 RFX7Q2KHR2 1363 aa9.63□□□□□ -0.87
PRKCA-204ENST00000583361 TESPA1A2RU30 521 aaPredicted RBP9.62□□□□□ -0.87
PRKCA-204ENST00000583361 GOLIM4O00461 696 aa9.62□□□□□ -0.87
PRKCA-204ENST00000583361 SMARCA5O60264 1052 aaPredicted RBP9.62□□□□□ -0.87
PRKCA-204ENST00000583361 SLURP2P0DP57 97 aa9.62□□□□□ -0.87
PRKCA-204ENST00000583361 DYNLL1P63167 89 aaKnown RBP9.62□□□□□ -0.87
PRKCA-204ENST00000583361 TTF1Q15361 905 aaPredicted RBP9.62□□□□□ -0.87
PRKCA-204ENST00000583361 NOL9Q5SY16 702 aaKnown RBP9.62□□□□□ -0.87
PRKCA-204ENST00000583361 GADL1Q6ZQY3 521 aa9.62□□□□□ -0.87
PRKCA-204ENST00000583361 SCYL3Q8IZE3 742 aa9.62□□□□□ -0.87
PRKCA-204ENST00000583361 FAM43AQ8N2R8 423 aa9.62□□□□□ -0.87
PRKCA-204ENST00000583361 CD99L2Q8TCZ2 262 aa9.62□□□□□ -0.87
PRKCA-204ENST00000583361 ERO1AQ96HE7 468 aa9.62□□□□□ -0.87
PRKCA-204ENST00000583361 CFHR5Q9BXR6 569 aa9.62□□□□□ -0.87
PRKCA-204ENST00000583361 SAP30BPQ9UHR5 308 aaKnown RBP9.62□□□□□ -0.87
PRKCA-204ENST00000583361 ZNF112Q9UJU3 913 aa9.62□□□□□ -0.87
PRKCA-204ENST00000583361 TRIM75PA6NK02 468 aa9.61□□□□□ -0.87
PRKCA-204ENST00000583361 BTBD19C9JJ37 291 aa9.61□□□□□ -0.87
PRKCA-204ENST00000583361 CTNND1O60716 968 aaKnown RBP9.61□□□□□ -0.87
PRKCA-204ENST00000583361 HLA-DOAP06340 250 aa9.61□□□□□ -0.87
PRKCA-204ENST00000583361 RRP1P56182 461 aaKnown RBP9.61□□□□□ -0.87
PRKCA-204ENST00000583361 SP3Q02447 781 aa9.61□□□□□ -0.87
PRKCA-204ENST00000583361 KIF22Q14807 665 aa9.61□□□□□ -0.87
PRKCA-204ENST00000583361 PKN2Q16513 984 aaKnown RBP9.61□□□□□ -0.87
PRKCA-204ENST00000583361 ADGRA1Q86SQ6 560 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms