RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 ADGRA1Q86SQ6 560 aa15.32■□□□□ 0.04
SMARCE1-218ENST00000582955 SH3RF3Q8TEJ3 882 aaPredicted RBP15.32■□□□□ 0.04
SMARCE1-218ENST00000582955 DDX4Q9NQI0 724 aaKnown RBP15.32■□□□□ 0.04
SMARCE1-218ENST00000582955 RFX7Q2KHR2 1363 aa15.32■□□□□ 0.04
SMARCE1-218ENST00000582955 UNCXA6NJT0 531 aa15.31■□□□□ 0.04
SMARCE1-218ENST00000582955 PLCG2P16885 1265 aa15.31■□□□□ 0.04
SMARCE1-218ENST00000582955 IRX6P78412 446 aaPredicted RBP15.31■□□□□ 0.04
SMARCE1-218ENST00000582955 HDAC1Q13547 482 aaPredicted RBP15.31■□□□□ 0.04
SMARCE1-218ENST00000582955 EDC3Q96F86 508 aaKnown RBP15.31■□□□□ 0.04
SMARCE1-218ENST00000582955 WRNIP1Q96S55 665 aa15.31■□□□□ 0.04
SMARCE1-218ENST00000582955 CSRNP1Q96S65 589 aa15.31■□□□□ 0.04
SMARCE1-218ENST00000582955 ZNF341Q9BYN7 854 aa15.31■□□□□ 0.04
SMARCE1-218ENST00000582955 ELP3Q9H9T3 547 aa15.31■□□□□ 0.04
SMARCE1-218ENST00000582955 ECHDC1Q9NTX5 307 aa15.31■□□□□ 0.04
SMARCE1-218ENST00000582955 PAG1Q9NWQ8 432 aa15.31■□□□□ 0.04
SMARCE1-218ENST00000582955 CSADQ9Y600 493 aa15.31■□□□□ 0.04
SMARCE1-218ENST00000582955 DOCK2Q92608 1830 aa15.31■□□□□ 0.04
SMARCE1-218ENST00000582955 OTOFQ9HC10 1997 aa15.31■□□□□ 0.04
SMARCE1-218ENST00000582955 CTCFP49711 727 aaPredicted RBP15.3■□□□□ 0.04
SMARCE1-218ENST00000582955 PPP4CP60510 307 aa15.3■□□□□ 0.04
SMARCE1-218ENST00000582955 MAP3K9P80192 1104 aa15.3■□□□□ 0.04
SMARCE1-218ENST00000582955 VGLL4Q14135 290 aa15.3■□□□□ 0.04
SMARCE1-218ENST00000582955 SPRYD7Q5W111 196 aa15.3■□□□□ 0.04
SMARCE1-218ENST00000582955 MIGA1Q8NAN2 632 aa15.3■□□□□ 0.04
SMARCE1-218ENST00000582955 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.3■□□□□ 0.04
SMARCE1-218ENST00000582955 GCC1Q96CN9 775 aa15.3■□□□□ 0.04
SMARCE1-218ENST00000582955 WNK4Q96J92 1243 aa15.3■□□□□ 0.04
SMARCE1-218ENST00000582955 HAUS7Q99871 368 aa15.3■□□□□ 0.04
SMARCE1-218ENST00000582955 DDTLA6NHG4 134 aaPredicted RBP15.29■□□□□ 0.04
SMARCE1-218ENST00000582955 DYNLL1P63167 89 aaKnown RBP15.29■□□□□ 0.04
SMARCE1-218ENST00000582955 SLC9C2Q5TAH2 1124 aa15.29■□□□□ 0.04
SMARCE1-218ENST00000582955 ANKRD45Q5TZF3 282 aa15.29■□□□□ 0.04
SMARCE1-218ENST00000582955 TSHZ3Q63HK5 1081 aa15.29■□□□□ 0.04
SMARCE1-218ENST00000582955 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.29■□□□□ 0.04
SMARCE1-218ENST00000582955 SH3BP5LQ7L8J4 393 aa15.29■□□□□ 0.04
SMARCE1-218ENST00000582955 REM2Q8IYK8 340 aaPredicted RBP15.29■□□□□ 0.04
SMARCE1-218ENST00000582955 RWDD1Q9H446 243 aaPredicted RBP15.29■□□□□ 0.04
SMARCE1-218ENST00000582955 TSKSQ9UJT2 592 aa15.29■□□□□ 0.04
SMARCE1-218ENST00000582955 CA12O43570 354 aa15.28■□□□□ 0.04
SMARCE1-218ENST00000582955 NPM3O75607 178 aaKnown RBP15.28■□□□□ 0.04
SMARCE1-218ENST00000582955 ZBTB48P10074 688 aaPredicted RBP15.28■□□□□ 0.04
SMARCE1-218ENST00000582955 HSPA8P11142 646 aaKnown RBP15.28■□□□□ 0.04
SMARCE1-218ENST00000582955 PDE6AP16499 860 aa15.28■□□□□ 0.04
SMARCE1-218ENST00000582955 LBX1P52954 281 aa15.28■□□□□ 0.04
SMARCE1-218ENST00000582955 TMED8Q6PL24 325 aaPredicted RBP15.28■□□□□ 0.04
SMARCE1-218ENST00000582955 MAPKAPK5Q8IW41 473 aa15.28■□□□□ 0.04
SMARCE1-218ENST00000582955 TGFBRAP1Q8WUH2 860 aa15.28■□□□□ 0.04
SMARCE1-218ENST00000582955 ZKSCAN4Q969J2 545 aaPredicted RBP15.28■□□□□ 0.04
SMARCE1-218ENST00000582955 OPTNQ96CV9 577 aa15.28■□□□□ 0.04
SMARCE1-218ENST00000582955 OSBPL5Q9H0X9 879 aaPredicted RBP15.28■□□□□ 0.04
SMARCE1-218ENST00000582955 ZNF532Q9HCE3 1301 aa15.27■□□□□ 0.04
SMARCE1-218ENST00000582955 INPP5BP32019 993 aa15.27■□□□□ 0.04
SMARCE1-218ENST00000582955 SREBF2Q12772 1141 aa15.27■□□□□ 0.04
SMARCE1-218ENST00000582955 CERS3Q8IU89 383 aa15.27■□□□□ 0.04
SMARCE1-218ENST00000582955 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.27■□□□□ 0.04
SMARCE1-218ENST00000582955 ATRNL1Q5VV63 1379 aa15.26■□□□□ 0.03
SMARCE1-218ENST00000582955 FLT1P17948 1338 aa15.26■□□□□ 0.03
SMARCE1-218ENST00000582955 MAGEB6P1A0A0J9YX57 407 aa15.26■□□□□ 0.03
SMARCE1-218ENST00000582955 MANSC4A6NHS7 340 aaPredicted RBP15.26■□□□□ 0.03
SMARCE1-218ENST00000582955 TRPA1O75762 1119 aa15.26■□□□□ 0.03
SMARCE1-218ENST00000582955 GJA5P36382 358 aa15.26■□□□□ 0.03
SMARCE1-218ENST00000582955 USP5P45974 858 aa15.26■□□□□ 0.03
SMARCE1-218ENST00000582955 OTUD7AQ8TE49 926 aaPredicted RBP15.26■□□□□ 0.03
SMARCE1-218ENST00000582955 OTUD5Q96G74 571 aa15.26■□□□□ 0.03
SMARCE1-218ENST00000582955 RNF186Q9NXI6 227 aa15.26■□□□□ 0.03
SMARCE1-218ENST00000582955 SNCAIPQ9Y6H5 919 aa15.26■□□□□ 0.03
SMARCE1-218ENST00000582955 U3KPZ7 1027 aaPredicted RBP15.26■□□□□ 0.03
SMARCE1-218ENST00000582955 COL2A1P02458 1487 aaPredicted RBP15.26■□□□□ 0.03
SMARCE1-218ENST00000582955 TTC41PQ6P2S7 1318 aa15.25■□□□□ 0.03
SMARCE1-218ENST00000582955 ERC2O15083 957 aa15.25■□□□□ 0.03
SMARCE1-218ENST00000582955 SLURP2P0DP57 97 aa15.25■□□□□ 0.03
SMARCE1-218ENST00000582955 B4GALNT3Q6L9W6 998 aa15.25■□□□□ 0.03
SMARCE1-218ENST00000582955 SAP30BPQ9UHR5 308 aaKnown RBP15.25■□□□□ 0.03
SMARCE1-218ENST00000582955 ZNF112Q9UJU3 913 aa15.25■□□□□ 0.03
SMARCE1-218ENST00000582955 TCRBV5S4A2TA0A5A2 114 aa15.24■□□□□ 0.03
SMARCE1-218ENST00000582955 SPDYE5A6NIY4 337 aa15.24■□□□□ 0.03
SMARCE1-218ENST00000582955 FAM196BA6NMK8 535 aa15.24■□□□□ 0.03
SMARCE1-218ENST00000582955 IGHDP01880 384 aa15.24■□□□□ 0.03
SMARCE1-218ENST00000582955 MX1P20591 662 aa15.24■□□□□ 0.03
SMARCE1-218ENST00000582955 ADD2P35612 726 aa15.24■□□□□ 0.03
SMARCE1-218ENST00000582955 TM4SF4P48230 202 aa15.24■□□□□ 0.03
SMARCE1-218ENST00000582955 ZSCAN25Q6NSZ9 544 aa15.24■□□□□ 0.03
SMARCE1-218ENST00000582955 ERO1BQ86YB8 467 aa15.24■□□□□ 0.03
SMARCE1-218ENST00000582955 RIOK1Q9BRS2 568 aaKnown RBP15.24■□□□□ 0.03
SMARCE1-218ENST00000582955 DHX36Q9H2U1 1008 aaKnown RBP15.24■□□□□ 0.03
SMARCE1-218ENST00000582955 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.24■□□□□ 0.032e-6■■■■■ 27.2
SMARCE1-218ENST00000582955 PRDM10Q9NQV6 1147 aa15.24■□□□□ 0.03
SMARCE1-218ENST00000582955 SAGE1Q9NXZ1 904 aa15.24■□□□□ 0.03
SMARCE1-218ENST00000582955 CDK5RAP2Q96SN8 1893 aa15.23■□□□□ 0.03
SMARCE1-218ENST00000582955 FOCADQ5VW36 1801 aa15.23■□□□□ 0.03
SMARCE1-218ENST00000582955 GLRX3O76003 335 aaKnown RBP15.23■□□□□ 0.03
SMARCE1-218ENST00000582955 INHBEP58166 350 aa15.23■□□□□ 0.03
SMARCE1-218ENST00000582955 SLC4A8Q2Y0W8 1093 aa15.23■□□□□ 0.03
SMARCE1-218ENST00000582955 SLFNL1Q499Z3 407 aa15.23■□□□□ 0.03
SMARCE1-218ENST00000582955 COL13A1Q5TAT6 717 aaPredicted RBP15.23■□□□□ 0.03
SMARCE1-218ENST00000582955 SMC5Q8IY18 1101 aa15.23■□□□□ 0.03
SMARCE1-218ENST00000582955 PI4K2BQ8TCG2 481 aa15.23■□□□□ 0.03
SMARCE1-218ENST00000582955 TRIM34Q9BYJ4 488 aa15.23■□□□□ 0.03
SMARCE1-218ENST00000582955 CRNKL1Q9BZJ0 848 aaKnown RBP15.23■□□□□ 0.03
SMARCE1-218ENST00000582955 LNPKQ9C0E8 428 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms