RNA–Protein interactions for RNA: ENST00000582671.1

LIMS2-218, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 4

Gene LIMS2, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-218ENST00000582671 CLASRPQ8N2M8 674 aaKnown RBP22.91■■□□□ 1.26
LIMS2-218ENST00000582671 ANTXR1Q9H6X2 564 aa22.91■■□□□ 1.26
LIMS2-218ENST00000582671 CSADQ9Y600 493 aa22.91■■□□□ 1.26
LIMS2-218ENST00000582671 SIPA1L1O43166 1804 aa22.91■■□□□ 1.26
LIMS2-218ENST00000582671 DDTLA6NHG4 134 aaPredicted RBP22.9■■□□□ 1.26
LIMS2-218ENST00000582671 IGF2BP3O00425 579 aaKnown RBP eCLIP22.9■■□□□ 1.26
LIMS2-218ENST00000582671 SLURP2P0DP57 97 aa22.9■■□□□ 1.26
LIMS2-218ENST00000582671 INPP5BP32019 993 aa22.9■■□□□ 1.26
LIMS2-218ENST00000582671 NAA16Q6N069 864 aaPredicted RBP22.9■■□□□ 1.26
LIMS2-218ENST00000582671 IFNL1Q8IU54 200 aa22.9■■□□□ 1.26
LIMS2-218ENST00000582671 BCL11AQ9H165 835 aa22.9■■□□□ 1.26
LIMS2-218ENST00000582671 INHBEP58166 350 aa22.89■■□□□ 1.25
LIMS2-218ENST00000582671 OTUD5Q96G74 571 aa22.89■■□□□ 1.25
LIMS2-218ENST00000582671 R3HDMLQ9H3Y0 253 aa22.89■■□□□ 1.25
LIMS2-218ENST00000582671 ZNF112Q9UJU3 913 aa22.89■■□□□ 1.25
LIMS2-218ENST00000582671 DOCK1Q14185 1865 aa22.89■■□□□ 1.25
LIMS2-218ENST00000582671 PHIPQ8WWQ0 1821 aa22.89■■□□□ 1.25
LIMS2-218ENST00000582671 ATAD5Q96QE3 1844 aa22.89■■□□□ 1.25
LIMS2-218ENST00000582671 TESPA1A2RU30 521 aaPredicted RBP22.88■■□□□ 1.25
LIMS2-218ENST00000582671 SPDYE5A6NIY4 337 aa22.88■■□□□ 1.25
LIMS2-218ENST00000582671 SH3RF3Q8TEJ3 882 aaPredicted RBP22.88■■□□□ 1.25
LIMS2-218ENST00000582671 MS4A4AQ96JQ5 239 aa22.88■■□□□ 1.25
LIMS2-218ENST00000582671 PTPN18Q99952 460 aa22.88■■□□□ 1.25
LIMS2-218ENST00000582671 AATFQ9NY61 560 aaKnown RBP eCLIP22.88■■□□□ 1.25
LIMS2-218ENST00000582671 MYH1P12882 1939 aa22.88■■□□□ 1.25
LIMS2-218ENST00000582671 MYH7P12883 1935 aa22.87■■□□□ 1.25
LIMS2-218ENST00000582671 NPM3O75607 178 aaKnown RBP22.87■■□□□ 1.25
LIMS2-218ENST00000582671 CAPN15O75808 1086 aa22.87■■□□□ 1.25
LIMS2-218ENST00000582671 ZSCAN29Q8IWY8 852 aaPredicted RBP22.87■■□□□ 1.25
LIMS2-218ENST00000582671 MAP4K4O95819 1239 aaPredicted RBP22.86■■□□□ 1.25
LIMS2-218ENST00000582671 IFIT2P09913 472 aaKnown RBP22.86■■□□□ 1.25
LIMS2-218ENST00000582671 PPP4CP60510 307 aa22.86■■□□□ 1.25
LIMS2-218ENST00000582671 ERO1BQ86YB8 467 aa22.86■■□□□ 1.25
LIMS2-218ENST00000582671 CFHR5Q9BXR6 569 aa22.86■■□□□ 1.25
LIMS2-218ENST00000582671 PTPRFP10586 1907 aa22.85■■□□□ 1.25
LIMS2-218ENST00000582671 PHF20L1A8MW92 1017 aa22.85■■□□□ 1.25
LIMS2-218ENST00000582671 SMARCA5O60264 1052 aaPredicted RBP22.85■■□□□ 1.25
LIMS2-218ENST00000582671 IDH1O75874 414 aaKnown RBP22.85■■□□□ 1.25
LIMS2-218ENST00000582671 MAP3K10Q02779 954 aa22.85■■□□□ 1.25
LIMS2-218ENST00000582671 TEX11Q8IYF3 940 aa22.85■■□□□ 1.25
LIMS2-218ENST00000582671 BRI3BPQ8WY22 251 aa22.85■■□□□ 1.25
LIMS2-218ENST00000582671 PCDHB15Q9Y5E8 787 aa22.85■■□□□ 1.25
LIMS2-218ENST00000582671 COL2A1P02458 1487 aaPredicted RBP22.85■■□□□ 1.25
LIMS2-218ENST00000582671 IGSF3O75054 1194 aa22.84■■□□□ 1.25
LIMS2-218ENST00000582671 ALDH1A1P00352 501 aa22.84■■□□□ 1.25
LIMS2-218ENST00000582671 ZNF296Q8WUU4 475 aaPredicted RBP22.84■■□□□ 1.25
LIMS2-218ENST00000582671 OSBPL5Q9H0X9 879 aaPredicted RBP22.84■■□□□ 1.25
LIMS2-218ENST00000582671 DCTPP1Q9H773 170 aa22.84■■□□□ 1.25
LIMS2-218ENST00000582671 GPR25O00155 361 aa22.83■■□□□ 1.25
LIMS2-218ENST00000582671 IRF6O14896 467 aa22.83■■□□□ 1.25
LIMS2-218ENST00000582671 BAG3O95817 575 aa22.83■■□□□ 1.25
LIMS2-218ENST00000582671 CYP7A1P22680 504 aa22.83■■□□□ 1.25
LIMS2-218ENST00000582671 DYNLL1P63167 89 aaKnown RBP22.83■■□□□ 1.25
LIMS2-218ENST00000582671 DGKZQ13574 1117 aa22.83■■□□□ 1.25
LIMS2-218ENST00000582671 NOL9Q5SY16 702 aaKnown RBP22.83■■□□□ 1.25
LIMS2-218ENST00000582671 MAGEB6Q8N7X4 407 aa22.83■■□□□ 1.25
LIMS2-218ENST00000582671 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.83■■□□□ 1.25
LIMS2-218ENST00000582671 ABHD8Q96I13 439 aa22.83■■□□□ 1.25
LIMS2-218ENST00000582671 CRBNQ96SW2 442 aa22.83■■□□□ 1.25
LIMS2-218ENST00000582671 NOL10Q9BSC4 688 aaKnown RBP22.83■■□□□ 1.25
LIMS2-218ENST00000582671 LRRCC1Q9C099 1032 aa22.83■■□□□ 1.25
LIMS2-218ENST00000582671 MCOLN1Q9GZU1 580 aa22.83■■□□□ 1.25
LIMS2-218ENST00000582671 CCL15-CCL14A0A0B4J2E2 113 aa22.82■■□□□ 1.24
LIMS2-218ENST00000582671 GTF2A2P52657 109 aa22.82■■□□□ 1.24
LIMS2-218ENST00000582671 PPATQ06203 517 aa22.82■■□□□ 1.24
LIMS2-218ENST00000582671 PPIL2Q13356 520 aa22.82■■□□□ 1.24
LIMS2-218ENST00000582671 CCL15Q16663 113 aa22.82■■□□□ 1.24
LIMS2-218ENST00000582671 FAM196BA6NMK8 535 aa22.81■■□□□ 1.24
LIMS2-218ENST00000582671 NOM1Q5C9Z4 860 aaKnown RBP22.81■■□□□ 1.24
LIMS2-218ENST00000582671 MIGA1Q8NAN2 632 aa22.81■■□□□ 1.24
LIMS2-218ENST00000582671 EDC3Q96F86 508 aaKnown RBP22.81■■□□□ 1.24
LIMS2-218ENST00000582671 GOLIM4O00461 696 aa22.8■■□□□ 1.24
LIMS2-218ENST00000582671 PLCG2P16885 1265 aa22.8■■□□□ 1.24
LIMS2-218ENST00000582671 MAP3K12Q12852 859 aa22.8■■□□□ 1.24
LIMS2-218ENST00000582671 CRHR2Q13324 411 aa22.8■■□□□ 1.24
LIMS2-218ENST00000582671 MAPKAPK5Q8IW41 473 aa22.8■■□□□ 1.24
LIMS2-218ENST00000582671 TGFBRAP1Q8WUH2 860 aa22.8■■□□□ 1.24
LIMS2-218ENST00000582671 DNAJC2Q99543 621 aaKnown RBP22.8■■□□□ 1.24
LIMS2-218ENST00000582671 TBC1D12O60347 775 aa22.79■■□□□ 1.24
LIMS2-218ENST00000582671 ATP5JP18859 108 aa22.79■■□□□ 1.24
LIMS2-218ENST00000582671 OTUD7BQ6GQQ9 843 aa22.79■■□□□ 1.24
LIMS2-218ENST00000582671 SCYL3Q8IZE3 742 aa22.79■■□□□ 1.24
LIMS2-218ENST00000582671 FAM43AQ8N2R8 423 aa22.79■■□□□ 1.24
LIMS2-218ENST00000582671 BOLA2Q9H3K6 86 aa22.79■■□□□ 1.24
LIMS2-218ENST00000582671 NAV1Q8NEY1 1877 aa22.79■■□□□ 1.24
LIMS2-218ENST00000582671 FLT1P17948 1338 aa22.79■■□□□ 1.24
LIMS2-218ENST00000582671 CETPP11597 493 aa22.78■■□□□ 1.24
LIMS2-218ENST00000582671 SNAPC2Q13487 334 aa22.78■■□□□ 1.24
LIMS2-218ENST00000582671 TTF1Q15361 905 aaPredicted RBP22.78■■□□□ 1.24
LIMS2-218ENST00000582671 DDX60LQ5H9U9 1706 aaKnown RBP22.78■■□□□ 1.24
LIMS2-218ENST00000582671 RRP1BQ14684 758 aaKnown RBP22.77■■□□□ 1.24
LIMS2-218ENST00000582671 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.77■■□□□ 1.24
LIMS2-218ENST00000582671 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.77■■□□□ 1.24
LIMS2-218ENST00000582671 KCNH4Q9UQ05 1017 aa22.77■■□□□ 1.24
LIMS2-218ENST00000582671 BTBD19C9JJ37 291 aa22.76■■□□□ 1.23
LIMS2-218ENST00000582671 FKTNO75072 461 aa22.76■■□□□ 1.23
LIMS2-218ENST00000582671 PDE6AP16499 860 aa22.76■■□□□ 1.23
LIMS2-218ENST00000582671 CTU1Q7Z7A3 348 aaKnown RBP22.76■■□□□ 1.23
LIMS2-218ENST00000582671 ZSWIM8A7E2V4 1837 aa22.75■■□□□ 1.23
LIMS2-218ENST00000582671 CTNND1O60716 968 aaKnown RBP22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms