RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 SMARCA5O60264 1052 aaPredicted RBP12.52□□□□□ -0.41
PPP4R1-220ENST00000581835 NPM3O75607 178 aaKnown RBP12.52□□□□□ -0.41
PPP4R1-220ENST00000581835 INHBEP58166 350 aa12.52□□□□□ -0.41
PPP4R1-220ENST00000581835 PPP4CP60510 307 aa12.52□□□□□ -0.41
PPP4R1-220ENST00000581835 ADGRA1Q86SQ6 560 aa12.52□□□□□ -0.41
PPP4R1-220ENST00000581835 TNS4Q8IZW8 715 aa12.52□□□□□ -0.41
PPP4R1-220ENST00000581835 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.52□□□□□ -0.41
PPP4R1-220ENST00000581835 CNKSR2Q8WXI2 1034 aa12.52□□□□□ -0.41
PPP4R1-220ENST00000581835 ZKSCAN4Q969J2 545 aaPredicted RBP12.52□□□□□ -0.41
PPP4R1-220ENST00000581835 OPTNQ96CV9 577 aa12.52□□□□□ -0.41
PPP4R1-220ENST00000581835 ZNF341Q9BYN7 854 aa12.52□□□□□ -0.41
PPP4R1-220ENST00000581835 ZNF112Q9UJU3 913 aa12.52□□□□□ -0.41
PPP4R1-220ENST00000581835 CSADQ9Y600 493 aa12.52□□□□□ -0.41
PPP4R1-220ENST00000581835 FOCADQ5VW36 1801 aa12.52□□□□□ -0.41
PPP4R1-220ENST00000581835 DDTLA6NHG4 134 aaPredicted RBP12.51□□□□□ -0.41
PPP4R1-220ENST00000581835 IDH1O75874 414 aaKnown RBP12.51□□□□□ -0.41
PPP4R1-220ENST00000581835 BAG3O95817 575 aa12.51□□□□□ -0.41
PPP4R1-220ENST00000581835 INPP5BP32019 993 aa12.51□□□□□ -0.41
PPP4R1-220ENST00000581835 MAP3K10Q02779 954 aa12.51□□□□□ -0.41
PPP4R1-220ENST00000581835 ZSCAN29Q8IWY8 852 aaPredicted RBP12.51□□□□□ -0.41
PPP4R1-220ENST00000581835 TEX11Q8IYF3 940 aa12.51□□□□□ -0.41
PPP4R1-220ENST00000581835 SH3RF3Q8TEJ3 882 aaPredicted RBP12.51□□□□□ -0.41
PPP4R1-220ENST00000581835 NOL10Q9BSC4 688 aaKnown RBP12.51□□□□□ -0.41
PPP4R1-220ENST00000581835 AATFQ9NY61 560 aaKnown RBP eCLIP12.51□□□□□ -0.41
PPP4R1-220ENST00000581835 SNCAIPQ9Y6H5 919 aa12.51□□□□□ -0.41
PPP4R1-220ENST00000581835 ATRNL1Q5VV63 1379 aa12.51□□□□□ -0.41
PPP4R1-220ENST00000581835 SPDYE5A6NIY4 337 aa12.5□□□□□ -0.41
PPP4R1-220ENST00000581835 PLCG2P16885 1265 aa12.5□□□□□ -0.41
PPP4R1-220ENST00000581835 CYP7A1P22680 504 aa12.5□□□□□ -0.41
PPP4R1-220ENST00000581835 MAP3K12Q12852 859 aa12.5□□□□□ -0.41
PPP4R1-220ENST00000581835 TTF1Q15361 905 aaPredicted RBP12.5□□□□□ -0.41
PPP4R1-220ENST00000581835 IFFO2Q5TF58 517 aa12.5□□□□□ -0.41
PPP4R1-220ENST00000581835 OTUD5Q96G74 571 aa12.5□□□□□ -0.41
PPP4R1-220ENST00000581835 MS4A4AQ96JQ5 239 aa12.5□□□□□ -0.41
PPP4R1-220ENST00000581835 OSBPL5Q9H0X9 879 aaPredicted RBP12.5□□□□□ -0.41
PPP4R1-220ENST00000581835 MYH1P12882 1939 aa12.49□□□□□ -0.41
PPP4R1-220ENST00000581835 COL2A1P02458 1487 aaPredicted RBP12.49□□□□□ -0.41
PPP4R1-220ENST00000581835 TESPA1A2RU30 521 aaPredicted RBP12.49□□□□□ -0.41
PPP4R1-220ENST00000581835 IGF2BP3O00425 579 aaKnown RBP eCLIP12.49□□□□□ -0.41
PPP4R1-220ENST00000581835 TBC1D8O95759 1140 aa12.49□□□□□ -0.41
PPP4R1-220ENST00000581835 SLURP2P0DP57 97 aa12.49□□□□□ -0.41
PPP4R1-220ENST00000581835 ATP5JP18859 108 aa12.49□□□□□ -0.41
PPP4R1-220ENST00000581835 TMED8Q6PL24 325 aaPredicted RBP12.49□□□□□ -0.41
PPP4R1-220ENST00000581835 ERO1BQ86YB8 467 aa12.49□□□□□ -0.41
PPP4R1-220ENST00000581835 IFNL1Q8IU54 200 aa12.49□□□□□ -0.41
PPP4R1-220ENST00000581835 MAGEB6Q8N7X4 407 aa12.49□□□□□ -0.41
PPP4R1-220ENST00000581835 CFHR5Q9BXR6 569 aa12.49□□□□□ -0.41
PPP4R1-220ENST00000581835 BOLA2Q9H3K6 86 aa12.49□□□□□ -0.41
PPP4R1-220ENST00000581835 MYH7P12883 1935 aa12.49□□□□□ -0.41
PPP4R1-220ENST00000581835 PHF20L1A8MW92 1017 aa12.48□□□□□ -0.41
PPP4R1-220ENST00000581835 GOLIM4O00461 696 aa12.48□□□□□ -0.41
PPP4R1-220ENST00000581835 IRF6O14896 467 aa12.48□□□□□ -0.41
PPP4R1-220ENST00000581835 ALDH1A1P00352 501 aa12.48□□□□□ -0.41
PPP4R1-220ENST00000581835 DYNLL1P63167 89 aaKnown RBP12.48□□□□□ -0.41
PPP4R1-220ENST00000581835 NOL9Q5SY16 702 aaKnown RBP12.48□□□□□ -0.41
PPP4R1-220ENST00000581835 TGFBRAP1Q8WUH2 860 aa12.48□□□□□ -0.41
PPP4R1-220ENST00000581835 EDC3Q96F86 508 aaKnown RBP12.48□□□□□ -0.41
PPP4R1-220ENST00000581835 DNAJC2Q99543 621 aaKnown RBP12.48□□□□□ -0.41
PPP4R1-220ENST00000581835 PTPN18Q99952 460 aa12.48□□□□□ -0.41
PPP4R1-220ENST00000581835 SIPA1L1O43166 1804 aa12.48□□□□□ -0.41
PPP4R1-220ENST00000581835 TBC1D12O60347 775 aa12.47□□□□□ -0.41
PPP4R1-220ENST00000581835 GTF2A2P52657 109 aa12.47□□□□□ -0.41
PPP4R1-220ENST00000581835 PPATQ06203 517 aa12.47□□□□□ -0.41
PPP4R1-220ENST00000581835 PPIL2Q13356 520 aa12.47□□□□□ -0.41
PPP4R1-220ENST00000581835 SLC9C2Q5TAH2 1124 aa12.47□□□□□ -0.41
PPP4R1-220ENST00000581835 MAPKAPK5Q8IW41 473 aa12.47□□□□□ -0.41
PPP4R1-220ENST00000581835 MIGA1Q8NAN2 632 aa12.47□□□□□ -0.41
PPP4R1-220ENST00000581835 HAUS7Q99871 368 aa12.47□□□□□ -0.41
PPP4R1-220ENST00000581835 R3HDMLQ9H3Y0 253 aa12.47□□□□□ -0.41
PPP4R1-220ENST00000581835 PAG1Q9NWQ8 432 aa12.47□□□□□ -0.41
PPP4R1-220ENST00000581835 DOCK1Q14185 1865 aa12.46□□□□□ -0.41
PPP4R1-220ENST00000581835 PHIPQ8WWQ0 1821 aa12.46□□□□□ -0.41
PPP4R1-220ENST00000581835 FLT1P17948 1338 aa12.46□□□□□ -0.41
PPP4R1-220ENST00000581835 CTNND1O60716 968 aaKnown RBP12.46□□□□□ -0.41
PPP4R1-220ENST00000581835 PDE6AP16499 860 aa12.46□□□□□ -0.41
PPP4R1-220ENST00000581835 AAMPQ13685 434 aa12.46□□□□□ -0.41
PPP4R1-220ENST00000581835 NOM1Q5C9Z4 860 aaKnown RBP12.46□□□□□ -0.41
PPP4R1-220ENST00000581835 OTUD7BQ6GQQ9 843 aa12.46□□□□□ -0.41
PPP4R1-220ENST00000581835 CERS3Q8IU89 383 aa12.46□□□□□ -0.41
PPP4R1-220ENST00000581835 BRI3BPQ8WY22 251 aa12.46□□□□□ -0.41
PPP4R1-220ENST00000581835 DHX36Q9H2U1 1008 aaKnown RBP12.46□□□□□ -0.41
PPP4R1-220ENST00000581835 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.46□□□□□ -0.416e-7■■■□□ 18.3
PPP4R1-220ENST00000581835 ECHDC1Q9NTX5 307 aa12.46□□□□□ -0.41
PPP4R1-220ENST00000581835 PI4KBQ9UBF8 816 aa12.46□□□□□ -0.41
PPP4R1-220ENST00000581835 PTPRFP10586 1907 aa12.46□□□□□ -0.42
PPP4R1-220ENST00000581835 ATAD5Q96QE3 1844 aa12.46□□□□□ -0.42
PPP4R1-220ENST00000581835 CCL15-CCL14A0A0B4J2E2 113 aa12.45□□□□□ -0.42
PPP4R1-220ENST00000581835 TCRBV5S4A2TA0A5A2 114 aa12.45□□□□□ -0.42
PPP4R1-220ENST00000581835 FAM196BA6NMK8 535 aa12.45□□□□□ -0.42
PPP4R1-220ENST00000581835 GPR25O00155 361 aa12.45□□□□□ -0.42
PPP4R1-220ENST00000581835 SNAPC2Q13487 334 aa12.45□□□□□ -0.42
PPP4R1-220ENST00000581835 HDAC1Q13547 482 aaPredicted RBP12.45□□□□□ -0.42
PPP4R1-220ENST00000581835 CCL15Q16663 113 aa12.45□□□□□ -0.42
PPP4R1-220ENST00000581835 SCYL3Q8IZE3 742 aa12.45□□□□□ -0.42
PPP4R1-220ENST00000581835 ZNF296Q8WUU4 475 aaPredicted RBP12.45□□□□□ -0.42
PPP4R1-220ENST00000581835 RIOK1Q9BRS2 568 aaKnown RBP12.45□□□□□ -0.42
PPP4R1-220ENST00000581835 KCNH4Q9UQ05 1017 aa12.45□□□□□ -0.42
PPP4R1-220ENST00000581835 SUPT16HQ9Y5B9 1047 aaKnown RBP12.45□□□□□ -0.42
PPP4R1-220ENST00000581835 ZNF532Q9HCE3 1301 aa12.44□□□□□ -0.42
PPP4R1-220ENST00000581835 CETPP11597 493 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms