RNA–Protein interactions for RNA: ENST00000580947.1

SUPT4H1-204, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 4 BASIC

Gene SUPT4H1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-204ENST00000580947 MGAMO43451 1857 aa13.03□□□□□ -0.32
SUPT4H1-204ENST00000580947 KIAA0100Q14667 2235 aaKnown RBP13.03□□□□□ -0.32
SUPT4H1-204ENST00000580947 PHF20L1A8MW92 1017 aa13.02□□□□□ -0.33
SUPT4H1-204ENST00000580947 NPM3O75607 178 aaKnown RBP13.02□□□□□ -0.33
SUPT4H1-204ENST00000580947 ALDH1A1P00352 501 aa13.02□□□□□ -0.33
SUPT4H1-204ENST00000580947 CYP2E1P05181 493 aaPredicted RBP13.02□□□□□ -0.33
SUPT4H1-204ENST00000580947 OS9Q13438 667 aaPredicted RBP13.02□□□□□ -0.33
SUPT4H1-204ENST00000580947 DCAF15Q66K64 600 aa13.02□□□□□ -0.33
SUPT4H1-204ENST00000580947 CTU1Q7Z7A3 348 aaKnown RBP13.02□□□□□ -0.33
SUPT4H1-204ENST00000580947 HOOK2Q96ED9 719 aa13.02□□□□□ -0.33
SUPT4H1-204ENST00000580947 ZNF341Q9BYN7 854 aa13.02□□□□□ -0.33
SUPT4H1-204ENST00000580947 SNRKQ9NRH2 765 aa13.02□□□□□ -0.33
SUPT4H1-204ENST00000580947 DDX19BQ9UMR2 479 aa13.02□□□□□ -0.33
SUPT4H1-204ENST00000580947 CSADQ9Y600 493 aa13.02□□□□□ -0.33
SUPT4H1-204ENST00000580947 RBBP6Q7Z6E9 1792 aaKnown RBP13.02□□□□□ -0.33
SUPT4H1-204ENST00000580947 DDTLA6NHG4 134 aaPredicted RBP13.01□□□□□ -0.33
SUPT4H1-204ENST00000580947 SLURP2P0DP57 97 aa13.01□□□□□ -0.33
SUPT4H1-204ENST00000580947 CRHR2Q13324 411 aa13.01□□□□□ -0.33
SUPT4H1-204ENST00000580947 NOL9Q5SY16 702 aaKnown RBP13.01□□□□□ -0.33
SUPT4H1-204ENST00000580947 ADGRA1Q86SQ6 560 aa13.01□□□□□ -0.33
SUPT4H1-204ENST00000580947 ERO1BQ86YB8 467 aa13.01□□□□□ -0.33
SUPT4H1-204ENST00000580947 SLF2Q8IX21 1173 aa13.01□□□□□ -0.33
SUPT4H1-204ENST00000580947 OTUD5Q96G74 571 aa13.01□□□□□ -0.33
SUPT4H1-204ENST00000580947 LOC285556D6RIA3 1793 aa13.01□□□□□ -0.33
SUPT4H1-204ENST00000580947 DOCK3Q8IZD9 2030 aa13□□□□□ -0.33
SUPT4H1-204ENST00000580947 IRF6O14896 467 aa13□□□□□ -0.33
SUPT4H1-204ENST00000580947 CAP1Q01518 475 aa13□□□□□ -0.33
SUPT4H1-204ENST00000580947 PPIL2Q13356 520 aa13□□□□□ -0.33
SUPT4H1-204ENST00000580947 PDE3AQ14432 1141 aa13□□□□□ -0.33
SUPT4H1-204ENST00000580947 CCDC158Q5M9N0 1113 aa13□□□□□ -0.33
SUPT4H1-204ENST00000580947 TTC39AQ5SRH9 613 aa13□□□□□ -0.33
SUPT4H1-204ENST00000580947 RPAP2Q8IXW5 612 aaPredicted RBP13□□□□□ -0.33
SUPT4H1-204ENST00000580947 FAM43AQ8N2R8 423 aa13□□□□□ -0.33
SUPT4H1-204ENST00000580947 CCDC8Q9H0W5 538 aaPredicted RBP13□□□□□ -0.33
SUPT4H1-204ENST00000580947 PIH1D3Q9NQM4 214 aaKnown RBP13□□□□□ -0.33
SUPT4H1-204ENST00000580947 MKI67P46013 3256 aaKnown RBP13□□□□□ -0.33
SUPT4H1-204ENST00000580947 NAV1Q8NEY1 1877 aa12.99□□□□□ -0.33
SUPT4H1-204ENST00000580947 CCL15-CCL14A0A0B4J2E2 113 aa12.99□□□□□ -0.33
SUPT4H1-204ENST00000580947 FKTNO75072 461 aa12.99□□□□□ -0.33
SUPT4H1-204ENST00000580947 MAP4K4O95819 1239 aaPredicted RBP12.99□□□□□ -0.33
SUPT4H1-204ENST00000580947 ZAP70P43403 619 aa12.99□□□□□ -0.33
SUPT4H1-204ENST00000580947 GTF2A2P52657 109 aa12.99□□□□□ -0.33
SUPT4H1-204ENST00000580947 GSTO1P78417 241 aa12.99□□□□□ -0.33
SUPT4H1-204ENST00000580947 PPATQ06203 517 aa12.99□□□□□ -0.33
SUPT4H1-204ENST00000580947 MOGSQ13724 837 aa12.99□□□□□ -0.33
SUPT4H1-204ENST00000580947 CCL15Q16663 113 aa12.99□□□□□ -0.33
SUPT4H1-204ENST00000580947 ERC1Q8IUD2 1116 aa12.99□□□□□ -0.33
SUPT4H1-204ENST00000580947 RHPN1Q8TCX5 695 aa12.99□□□□□ -0.33
SUPT4H1-204ENST00000580947 RAI14Q9P0K7 980 aa12.99□□□□□ -0.33
SUPT4H1-204ENST00000580947 KCNH4Q9UQ05 1017 aa12.99□□□□□ -0.33
SUPT4H1-204ENST00000580947 MYH8P13535 1937 aa12.98□□□□□ -0.33
SUPT4H1-204ENST00000580947 IGSF3O75054 1194 aa12.98□□□□□ -0.33
SUPT4H1-204ENST00000580947 LDHCP07864 332 aa12.98□□□□□ -0.33
SUPT4H1-204ENST00000580947 RGS19P49795 217 aa12.98□□□□□ -0.33
SUPT4H1-204ENST00000580947 PPP4CP60510 307 aa12.98□□□□□ -0.33
SUPT4H1-204ENST00000580947 LRP2BPQ9P2M1 347 aa12.98□□□□□ -0.33
SUPT4H1-204ENST00000580947 BAZ2AQ9UIF9 1905 aaKnown RBP12.98□□□□□ -0.33
SUPT4H1-204ENST00000580947 CCDC85CA6NKD9 419 aa12.97□□□□□ -0.33
SUPT4H1-204ENST00000580947 PICALMQ13492 652 aa12.97□□□□□ -0.33
SUPT4H1-204ENST00000580947 AACSQ86V21 672 aa12.97□□□□□ -0.33
SUPT4H1-204ENST00000580947 SH3RF3Q8TEJ3 882 aaPredicted RBP12.97□□□□□ -0.33
SUPT4H1-204ENST00000580947 OSBPL5Q9H0X9 879 aaPredicted RBP12.97□□□□□ -0.33
SUPT4H1-204ENST00000580947 IL1RAPL2Q9NP60 686 aa12.97□□□□□ -0.33
SUPT4H1-204ENST00000580947 ZCCHC17Q9NP64 241 aaKnown RBP12.97□□□□□ -0.33
SUPT4H1-204ENST00000580947 NDUFB9Q9Y6M9 179 aa12.97□□□□□ -0.33
SUPT4H1-204ENST00000580947 ADGRA2Q96PE1 1338 aa12.96□□□□□ -0.33
SUPT4H1-204ENST00000580947 BTBD19C9JJ37 291 aa12.96□□□□□ -0.33
SUPT4H1-204ENST00000580947 TBC1D12O60347 775 aa12.96□□□□□ -0.33
SUPT4H1-204ENST00000580947 CETPP11597 493 aa12.96□□□□□ -0.33
SUPT4H1-204ENST00000580947 SNAPC2Q13487 334 aa12.96□□□□□ -0.33
SUPT4H1-204ENST00000580947 PKN2Q16513 984 aaKnown RBP12.96□□□□□ -0.33
SUPT4H1-204ENST00000580947 HSP90AB4PQ58FF6 505 aa12.96□□□□□ -0.33
SUPT4H1-204ENST00000580947 OTUD7BQ6GQQ9 843 aa12.96□□□□□ -0.33
SUPT4H1-204ENST00000580947 NAA16Q6N069 864 aaPredicted RBP12.96□□□□□ -0.33
SUPT4H1-204ENST00000580947 ANTXR1Q9H6X2 564 aa12.96□□□□□ -0.33
SUPT4H1-204ENST00000580947 HPS5Q9UPZ3 1129 aa12.96□□□□□ -0.33
SUPT4H1-204ENST00000580947 RRP1BQ14684 758 aaKnown RBP12.95□□□□□ -0.34
SUPT4H1-204ENST00000580947 OTOP1Q7RTM1 612 aa12.95□□□□□ -0.34
SUPT4H1-204ENST00000580947 TEX11Q8IYF3 940 aa12.95□□□□□ -0.34
SUPT4H1-204ENST00000580947 SCYL3Q8IZE3 742 aa12.95□□□□□ -0.34
SUPT4H1-204ENST00000580947 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.95□□□□□ -0.34
SUPT4H1-204ENST00000580947 KIF1BPQ96EK5 621 aa12.95□□□□□ -0.34
SUPT4H1-204ENST00000580947 AATFQ9NY61 560 aaKnown RBP eCLIP12.95□□□□□ -0.34
SUPT4H1-204ENST00000580947 FAM196BA6NMK8 535 aa12.94□□□□□ -0.34
SUPT4H1-204ENST00000580947 CTNND1O60716 968 aaKnown RBP12.94□□□□□ -0.34
SUPT4H1-204ENST00000580947 HMMRO75330 724 aa12.94□□□□□ -0.34
SUPT4H1-204ENST00000580947 PTPRAP18433 802 aa12.94□□□□□ -0.34
SUPT4H1-204ENST00000580947 TAF1CQ15572 869 aaPredicted RBP12.94□□□□□ -0.34
SUPT4H1-204ENST00000580947 GPAT2Q6NUI2 795 aa12.94□□□□□ -0.34
SUPT4H1-204ENST00000580947 FBXO46Q6PJ61 603 aaPredicted RBP12.94□□□□□ -0.34
SUPT4H1-204ENST00000580947 METTL16Q86W50 562 aaKnown RBP12.94□□□□□ -0.34
SUPT4H1-204ENST00000580947 ZSCAN29Q8IWY8 852 aaPredicted RBP12.94□□□□□ -0.34
SUPT4H1-204ENST00000580947 CD99L2Q8TCZ2 262 aa12.94□□□□□ -0.34
SUPT4H1-204ENST00000580947 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.94□□□□□ -0.34
SUPT4H1-204ENST00000580947 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.94□□□□□ -0.34
SUPT4H1-204ENST00000580947 AFG3L2Q9Y4W6 797 aa12.94□□□□□ -0.34
SUPT4H1-204ENST00000580947 FLT1P17948 1338 aa12.93□□□□□ -0.34
SUPT4H1-204ENST00000580947 CXCL11O14625 94 aa12.93□□□□□ -0.34
SUPT4H1-204ENST00000580947 TLR2O60603 784 aa12.93□□□□□ -0.34
SUPT4H1-204ENST00000580947 RAB11FIP3O75154 756 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms