RNA–Protein interactions for RNA: ENST00000580875.1

SNX11-207, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-207ENST00000580875 PSMC4P43686 418 aa25.75■■□□□ 1.71
SNX11-207ENST00000580875 ZSCAN29Q8IWY8 852 aaPredicted RBP25.75■■□□□ 1.71
SNX11-207ENST00000580875 SCYL3Q8IZE3 742 aa25.75■■□□□ 1.71
SNX11-207ENST00000580875 PARK7Q99497 189 aaKnown RBP25.75■■□□□ 1.71
SNX11-207ENST00000580875 PICK1Q9NRD5 415 aa25.75■■□□□ 1.71
SNX11-207ENST00000580875 MYH2Q9UKX2 1941 aa25.73■■□□□ 1.71
SNX11-207ENST00000580875 MROH7-TTC4A0A0A0MT08 1334 aa25.73■■□□□ 1.71
SNX11-207ENST00000580875 IPO8O15397 1037 aaKnown RBP25.73■■□□□ 1.71
SNX11-207ENST00000580875 ECM2O94769 699 aaPredicted RBP25.73■■□□□ 1.71
SNX11-207ENST00000580875 HOXD10P28358 340 aa25.73■■□□□ 1.71
SNX11-207ENST00000580875 CTGFP29279 349 aa25.73■■□□□ 1.71
SNX11-207ENST00000580875 BTDP43251 543 aa25.73■■□□□ 1.71
SNX11-207ENST00000580875 MAP3K10Q02779 954 aa25.73■■□□□ 1.71
SNX11-207ENST00000580875 SH3BP5LQ7L8J4 393 aa25.73■■□□□ 1.71
SNX11-207ENST00000580875 TRIM47Q96LD4 638 aa25.73■■□□□ 1.71
SNX11-207ENST00000580875 SRRDQ9UH36 339 aa25.73■■□□□ 1.71
SNX11-207ENST00000580875 ZHX2Q9Y6X8 837 aa25.73■■□□□ 1.71
SNX11-207ENST00000580875 DOCK2Q92608 1830 aa25.72■■□□□ 1.71
SNX11-207ENST00000580875 PTPRAP18433 802 aa25.72■■□□□ 1.71
SNX11-207ENST00000580875 GPAT2Q6NUI2 795 aa25.72■■□□□ 1.71
SNX11-207ENST00000580875 ERICH6Q7L0X2 663 aa25.72■■□□□ 1.71
SNX11-207ENST00000580875 FASTKD5Q7L8L6 764 aaKnown RBP25.72■■□□□ 1.71
SNX11-207ENST00000580875 NEUROD6Q96NK8 337 aa25.72■■□□□ 1.71
SNX11-207ENST00000580875 DDTLA6NHG4 134 aaPredicted RBP25.71■■□□□ 1.71
SNX11-207ENST00000580875 FMNL1O95466 1100 aaPredicted RBP25.71■■□□□ 1.71
SNX11-207ENST00000580875 TRIM27P14373 513 aa25.71■■□□□ 1.71
SNX11-207ENST00000580875 MECOMQ03112 1051 aa25.71■■□□□ 1.71
SNX11-207ENST00000580875 PICALMQ13492 652 aa25.71■■□□□ 1.71
SNX11-207ENST00000580875 DDX4Q9NQI0 724 aaKnown RBP25.71■■□□□ 1.71
SNX11-207ENST00000580875 GPR75-ASB3A0A0A6YYF3 556 aa25.7■■□□□ 1.7
SNX11-207ENST00000580875 A0A0G2JLL6 359 aaPredicted RBP25.7■■□□□ 1.7
SNX11-207ENST00000580875 CTNND1O60716 968 aaKnown RBP25.7■■□□□ 1.7
SNX11-207ENST00000580875 GNAI2P04899 355 aa25.7■■□□□ 1.7
SNX11-207ENST00000580875 CYP2C8P10632 490 aa25.7■■□□□ 1.7
SNX11-207ENST00000580875 OSBPP22059 807 aa25.7■■□□□ 1.7
SNX11-207ENST00000580875 PRRT2Q7Z6L0 340 aaPredicted RBP25.7■■□□□ 1.7
SNX11-207ENST00000580875 AFG3L2Q9Y4W6 797 aa25.7■■□□□ 1.7
SNX11-207ENST00000580875 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.7■■□□□ 1.7
SNX11-207ENST00000580875 GORABQ5T7V8 394 aa25.69■■□□□ 1.7
SNX11-207ENST00000580875 ATF7IPQ6VMQ6 1270 aa25.69■■□□□ 1.7
SNX11-207ENST00000580875 SPATA5Q8NB90 893 aa25.69■■□□□ 1.7
SNX11-207ENST00000580875 RAET1EQ8TD07 263 aa25.69■■□□□ 1.7
SNX11-207ENST00000580875 HMG20BQ9P0W2 317 aa25.69■■□□□ 1.7
SNX11-207ENST00000580875 MYPNQ86TC9 1320 aa25.68■■□□□ 1.7
SNX11-207ENST00000580875 BCRP11274 1271 aa25.68■■□□□ 1.7
SNX11-207ENST00000580875 HABP4Q5JVS0 413 aaKnown RBP25.68■■□□□ 1.7
SNX11-207ENST00000580875 NPM3O75607 178 aaKnown RBP25.67■■□□□ 1.7
SNX11-207ENST00000580875 FCGRTP55899 365 aa25.67■■□□□ 1.7
SNX11-207ENST00000580875 RHBDL3P58872 404 aa25.67■■□□□ 1.7
SNX11-207ENST00000580875 GSTO1P78417 241 aa25.67■■□□□ 1.7
SNX11-207ENST00000580875 ZNF384Q8TF68 577 aa25.67■■□□□ 1.7
SNX11-207ENST00000580875 FRAT1Q92837 279 aaPredicted RBP25.67■■□□□ 1.7
SNX11-207ENST00000580875 SLC45A1Q9Y2W3 748 aa25.67■■□□□ 1.7
SNX11-207ENST00000580875 MAP4K4O95819 1239 aaPredicted RBP25.66■■□□□ 1.7
SNX11-207ENST00000580875 LDHCP07864 332 aa25.66■■□□□ 1.7
SNX11-207ENST00000580875 SLURP2P0DP57 97 aa25.66■■□□□ 1.7
SNX11-207ENST00000580875 GRK4P32298 578 aa25.66■■□□□ 1.7
SNX11-207ENST00000580875 G3BP1Q13283 466 aaKnown RBP eCLIP25.66■■□□□ 1.7
SNX11-207ENST00000580875 PI16Q6UXB8 463 aa25.66■■□□□ 1.7
SNX11-207ENST00000580875 TBC1D12O60347 775 aa25.65■■□□□ 1.7
SNX11-207ENST00000580875 BCAR3O75815 825 aa25.65■■□□□ 1.7
SNX11-207ENST00000580875 ARID4AP29374 1257 aaPredicted RBP25.65■■□□□ 1.7
SNX11-207ENST00000580875 HNRNPUQ00839 825 aaKnown RBP eCLIP25.65■■□□□ 1.7
SNX11-207ENST00000580875 GADL1Q6ZQY3 521 aa25.65■■□□□ 1.7
SNX11-207ENST00000580875 TBC1D9Q6ZT07 1266 aa25.65■■□□□ 1.7
SNX11-207ENST00000580875 NSUN4Q96CB9 384 aaKnown RBP25.65■■□□□ 1.7
SNX11-207ENST00000580875 PNMA6EA0A0J9YXQ4 647 aa25.64■■□□□ 1.7
SNX11-207ENST00000580875 TRIM75PA6NK02 468 aa25.64■■□□□ 1.7
SNX11-207ENST00000580875 PRKCZQ05513 592 aa25.64■■□□□ 1.7
SNX11-207ENST00000580875 MTFR1Q15390 333 aa25.64■■□□□ 1.7
SNX11-207ENST00000580875 CLUAP1Q96AJ1 413 aa25.64■■□□□ 1.7
SNX11-207ENST00000580875 RAI14Q9P0K7 980 aa25.64■■□□□ 1.7
SNX11-207ENST00000580875 TNNQ9UQP3 1299 aa25.64■■□□□ 1.7
SNX11-207ENST00000580875 CENPBP07199 599 aaPredicted RBP25.63■■□□□ 1.69
SNX11-207ENST00000580875 DOCK1Q14185 1865 aa25.63■■□□□ 1.69
SNX11-207ENST00000580875 UQCRFS1P1P0C7P4 283 aa25.62■■□□□ 1.69
SNX11-207ENST00000580875 MCAMP43121 646 aa25.62■■□□□ 1.69
SNX11-207ENST00000580875 NKX2-3Q8TAU0 364 aa25.62■■□□□ 1.69
SNX11-207ENST00000580875 SMCR8Q8TEV9 937 aaPredicted RBP25.62■■□□□ 1.69
SNX11-207ENST00000580875 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.62■■□□□ 1.69
SNX11-207ENST00000580875 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.62■■□□□ 1.69
SNX11-207ENST00000580875 COL2A1P02458 1487 aaPredicted RBP25.61■■□□□ 1.69
SNX11-207ENST00000580875 SHISA4Q96DD7 197 aa25.61■■□□□ 1.69
SNX11-207ENST00000580875 OSBPL5Q9H0X9 879 aaPredicted RBP25.61■■□□□ 1.69
SNX11-207ENST00000580875 LRP2BPQ9P2M1 347 aa25.61■■□□□ 1.69
SNX11-207ENST00000580875 BIN2Q9UBW5 565 aaPredicted RBP25.61■■□□□ 1.69
SNX11-207ENST00000580875 AGTPBP1Q9UPW5 1226 aa25.61■■□□□ 1.69
SNX11-207ENST00000580875 UBXN2AP68543 259 aa25.6■■□□□ 1.69
SNX11-207ENST00000580875 CCDC84Q86UT8 332 aaPredicted RBP25.6■■□□□ 1.69
SNX11-207ENST00000580875 SLAIN1Q8ND83 568 aa25.6■■□□□ 1.69
SNX11-207ENST00000580875 FAM196BA6NMK8 535 aa25.59■■□□□ 1.69
SNX11-207ENST00000580875 CCL5P13501 91 aa25.59■■□□□ 1.69
SNX11-207ENST00000580875 TMEM57Q8N5G2 664 aa25.59■■□□□ 1.69
SNX11-207ENST00000580875 GABRQQ9UN88 632 aa25.59■■□□□ 1.69
SNX11-207ENST00000580875 PHIPQ8WWQ0 1821 aa25.58■■□□□ 1.69
SNX11-207ENST00000580875 GJB1P08034 283 aa25.58■■□□□ 1.69
SNX11-207ENST00000580875 GJA8P48165 433 aa25.58■■□□□ 1.69
SNX11-207ENST00000580875 ZKSCAN2Q63HK3 967 aa25.58■■□□□ 1.69
SNX11-207ENST00000580875 TEX11Q8IYF3 940 aa25.58■■□□□ 1.69
SNX11-207ENST00000580875 NOL10Q9BSC4 688 aaKnown RBP25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms