RNA–Protein interactions for RNA: ENST00000580231.5

SENP3-203, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-203ENST00000580231 ZNF589Q86UQ0 364 aaPredicted RBP10.78□□□□□ -0.68
SENP3-203ENST00000580231 SYMPKQ92797 1274 aaKnown RBP10.78□□□□□ -0.68
SENP3-203ENST00000580231 CHMP4CQ96CF2 233 aa10.78□□□□□ -0.68
SENP3-203ENST00000580231 REPIN1Q9BWE0 567 aaKnown RBP10.78□□□□□ -0.68
SENP3-203ENST00000580231 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.78□□□□□ -0.68
SENP3-203ENST00000580231 CTNNA3Q9UI47 895 aa10.78□□□□□ -0.68
SENP3-203ENST00000580231 WDR33Q9C0J8 1336 aaKnown RBP10.78□□□□□ -0.68
SENP3-203ENST00000580231 RIC1Q4ADV7 1423 aa10.77□□□□□ -0.68
SENP3-203ENST00000580231 JUNDP17535 347 aa10.77□□□□□ -0.69
SENP3-203ENST00000580231 FGFR2P21802 821 aa10.77□□□□□ -0.69
SENP3-203ENST00000580231 ADORA1P30542 326 aa10.77□□□□□ -0.69
SENP3-203ENST00000580231 IGHMBP2P38935 993 aaKnown RBP10.77□□□□□ -0.69
SENP3-203ENST00000580231 FKBP4Q02790 459 aaKnown RBP eCLIP10.77□□□□□ -0.69
SENP3-203ENST00000580231 SF3B2Q13435 895 aaKnown RBP10.77□□□□□ -0.69
SENP3-203ENST00000580231 SF3B3Q15393 1217 aaKnown RBP10.77□□□□□ -0.69
SENP3-203ENST00000580231 ADCK5Q3MIX3 580 aa10.77□□□□□ -0.69
SENP3-203ENST00000580231 KRI1Q8N9T8 703 aaKnown RBP10.77□□□□□ -0.69
SENP3-203ENST00000580231 LINC00116Q8NCU8 138 aa10.77□□□□□ -0.69
SENP3-203ENST00000580231 CCDC85AQ96PX6 553 aaPredicted RBP10.77□□□□□ -0.69
SENP3-203ENST00000580231 NEK1Q96PY6 1258 aa10.77□□□□□ -0.69
SENP3-203ENST00000580231 CDC5LQ99459 802 aaKnown RBP10.77□□□□□ -0.69
SENP3-203ENST00000580231 MPHOSPH8Q99549 860 aa10.77□□□□□ -0.69
SENP3-203ENST00000580231 NYXQ9GZU5 481 aa10.77□□□□□ -0.69
SENP3-203ENST00000580231 GMPR2Q9P2T1 348 aaKnown RBP10.77□□□□□ -0.69
SENP3-203ENST00000580231 NARFQ9UHQ1 456 aa10.77□□□□□ -0.69
SENP3-203ENST00000580231 ZDHHC9Q9Y397 364 aa10.77□□□□□ -0.69
SENP3-203ENST00000580231 SLC5A1P13866 664 aa10.76□□□□□ -0.69
SENP3-203ENST00000580231 HCLS1P14317 486 aaPredicted RBP10.76□□□□□ -0.69
SENP3-203ENST00000580231 ARID4AP29374 1257 aaPredicted RBP10.76□□□□□ -0.69
SENP3-203ENST00000580231 L1TD1Q5T7N2 865 aaKnown RBP10.76□□□□□ -0.69
SENP3-203ENST00000580231 APPBP2Q92624 585 aa10.76□□□□□ -0.69
SENP3-203ENST00000580231 SMC3Q9UQE7 1217 aa10.76□□□□□ -0.69
SENP3-203ENST00000580231 BCORQ6W2J9 1755 aa10.75□□□□□ -0.69
SENP3-203ENST00000580231 J3QL48 77 aa10.75□□□□□ -0.69
SENP3-203ENST00000580231 HSPD1P10809 573 aaKnown RBP10.75□□□□□ -0.69
SENP3-203ENST00000580231 ZAP70P43403 619 aa10.75□□□□□ -0.69
SENP3-203ENST00000580231 SKOR1P84550 965 aa10.75□□□□□ -0.69
SENP3-203ENST00000580231 UBE3CQ15386 1083 aa10.75□□□□□ -0.69
SENP3-203ENST00000580231 KLHL40Q2TBA0 621 aa10.75□□□□□ -0.69
SENP3-203ENST00000580231 SEC62Q99442 399 aaKnown RBP10.75□□□□□ -0.69
SENP3-203ENST00000580231 ATP6V1DQ9Y5K8 247 aa10.75□□□□□ -0.69
SENP3-203ENST00000580231 NDUFB9Q9Y6M9 179 aa10.75□□□□□ -0.69
SENP3-203ENST00000580231 LRP5O75197 1615 aa10.75□□□□□ -0.69
SENP3-203ENST00000580231 NHSQ6T4R5 1651 aa10.75□□□□□ -0.69
SENP3-203ENST00000580231 LAMB2P55268 1798 aa10.75□□□□□ -0.69
SENP3-203ENST00000580231 CYP21A2P08686 494 aa10.74□□□□□ -0.69
SENP3-203ENST00000580231 PDCP20941 246 aa10.74□□□□□ -0.69
SENP3-203ENST00000580231 CCDC102BQ68D86 513 aa10.74□□□□□ -0.69
SENP3-203ENST00000580231 NOL8Q76FK4 1167 aaKnown RBP10.74□□□□□ -0.69
SENP3-203ENST00000580231 RETREG3Q86VR2 466 aa10.74□□□□□ -0.69
SENP3-203ENST00000580231 FBXL16Q8N461 479 aa10.74□□□□□ -0.69
SENP3-203ENST00000580231 RTCBQ9Y3I0 505 aaKnown RBP10.74□□□□□ -0.69
SENP3-203ENST00000580231 MAST3O60307 1309 aa10.74□□□□□ -0.69
SENP3-203ENST00000580231 CPA1P15085 419 aa10.73□□□□□ -0.69
SENP3-203ENST00000580231 ADD2P35612 726 aa10.73□□□□□ -0.69
SENP3-203ENST00000580231 MCAMP43121 646 aa10.73□□□□□ -0.69
SENP3-203ENST00000580231 BAG6P46379 1132 aa10.73□□□□□ -0.69
SENP3-203ENST00000580231 WNT7BP56706 349 aa10.73□□□□□ -0.69
SENP3-203ENST00000580231 WASHC4Q2M389 1173 aa10.73□□□□□ -0.69
SENP3-203ENST00000580231 LCE2AQ5TA79 106 aaPredicted RBP10.73□□□□□ -0.69
SENP3-203ENST00000580231 MCTP1Q6DN14 999 aa10.73□□□□□ -0.69
SENP3-203ENST00000580231 TREML4Q6UXN2 200 aa10.73□□□□□ -0.69
SENP3-203ENST00000580231 CCDC129Q6ZRS4 1044 aa10.73□□□□□ -0.69
SENP3-203ENST00000580231 DHX32Q7L7V1 743 aaKnown RBP10.73□□□□□ -0.69
SENP3-203ENST00000580231 OSBP2Q969R2 916 aa10.73□□□□□ -0.69
SENP3-203ENST00000580231 SETDB2Q96T68 719 aa10.73□□□□□ -0.69
SENP3-203ENST00000580231 LMBRD1Q9NUN5 540 aa10.73□□□□□ -0.69
SENP3-203ENST00000580231 CCNL1Q9UK58 526 aaPredicted RBP10.73□□□□□ -0.69
SENP3-203ENST00000580231 DDX60Q8IY21 1712 aaKnown RBP10.72□□□□□ -0.69
SENP3-203ENST00000580231 BTAF1O14981 1849 aa10.72□□□□□ -0.69
SENP3-203ENST00000580231 FAM177BA6PVY3 158 aa10.72□□□□□ -0.69
SENP3-203ENST00000580231 STX6O43752 255 aa10.72□□□□□ -0.69
SENP3-203ENST00000580231 MBD3O95983 291 aa10.72□□□□□ -0.69
SENP3-203ENST00000580231 ZSCAN22P10073 491 aaPredicted RBP10.72□□□□□ -0.69
SENP3-203ENST00000580231 FDX1P10109 184 aa10.72□□□□□ -0.69
SENP3-203ENST00000580231 GTF2E1P29083 439 aaPredicted RBP10.72□□□□□ -0.69
SENP3-203ENST00000580231 SSTR3P32745 418 aaPredicted RBP10.72□□□□□ -0.69
SENP3-203ENST00000580231 EXOSC10Q01780 885 aaKnown RBP10.72□□□□□ -0.69
SENP3-203ENST00000580231 PKP1Q13835 747 aa10.72□□□□□ -0.69
SENP3-203ENST00000580231 UBE4AQ14139 1066 aa10.72□□□□□ -0.69
SENP3-203ENST00000580231 SCARF1Q14162 830 aa10.72□□□□□ -0.69
SENP3-203ENST00000580231 ME3Q16798 604 aa10.72□□□□□ -0.69
SENP3-203ENST00000580231 TPTE2Q6XPS3 522 aa10.72□□□□□ -0.69
SENP3-203ENST00000580231 ANKRD18AQ8IVF6 992 aa10.72□□□□□ -0.69
SENP3-203ENST00000580231 NLRP3Q96P20 1036 aa10.72□□□□□ -0.69
SENP3-203ENST00000580231 SEC31BQ9NQW1 1179 aa10.72□□□□□ -0.69
SENP3-203ENST00000580231 GNL3LQ9NVN8 582 aaKnown RBP10.72□□□□□ -0.69
SENP3-203ENST00000580231 BSDC1Q9NW68 430 aaPredicted RBP10.72□□□□□ -0.69
SENP3-203ENST00000580231 TPCN1Q9ULQ1 816 aa10.72□□□□□ -0.69
SENP3-203ENST00000580231 PCDHGC3Q9UN70 934 aa10.72□□□□□ -0.69
SENP3-203ENST00000580231 DDX49Q9Y6V7 483 aaKnown RBP10.72□□□□□ -0.69
SENP3-203ENST00000580231 ARAP2Q8WZ64 1704 aa10.72□□□□□ -0.69
SENP3-203ENST00000580231 AKAP11Q9UKA4 1901 aa10.72□□□□□ -0.69
SENP3-203ENST00000580231 FSD2A1L4K1 749 aa10.71□□□□□ -0.69
SENP3-203ENST00000580231 GOLGA6L3A6NEY3 463 aa10.71□□□□□ -0.69
SENP3-203ENST00000580231 M0R2C6 588 aa10.71□□□□□ -0.69
SENP3-203ENST00000580231 IGSF3O75054 1194 aa10.71□□□□□ -0.69
SENP3-203ENST00000580231 SYT1P21579 422 aa10.71□□□□□ -0.69
SENP3-203ENST00000580231 PHKA1P46020 1223 aa10.71□□□□□ -0.69
SENP3-203ENST00000580231 MAP3K12Q12852 859 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms