RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 MYCBPQ99417 103 aaPredicted RBP8.05□□□□□ -1.12
COPS3-216ENST00000579716 POP1Q99575 1024 aaKnown RBP8.05□□□□□ -1.12
COPS3-216ENST00000579716 ZHX3Q9H4I2 956 aa8.05□□□□□ -1.12
COPS3-216ENST00000579716 PIF1Q9H611 641 aa8.05□□□□□ -1.12
COPS3-216ENST00000579716 IFT57Q9NWB7 429 aa8.05□□□□□ -1.12
COPS3-216ENST00000579716 NLRP2Q9NX02 1062 aa8.05□□□□□ -1.12
COPS3-216ENST00000579716 UBAP1LF5GYI3 381 aa8.04□□□□□ -1.12
COPS3-216ENST00000579716 FSCN2O14926 492 aa8.04□□□□□ -1.12
COPS3-216ENST00000579716 GSC2O15499 205 aa8.04□□□□□ -1.12
COPS3-216ENST00000579716 NEXNQ0ZGT2 675 aa8.04□□□□□ -1.12
COPS3-216ENST00000579716 MAPRE1Q15691 268 aaKnown RBP8.04□□□□□ -1.12
COPS3-216ENST00000579716 SOGA3Q5TF21 947 aa8.04□□□□□ -1.12
COPS3-216ENST00000579716 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.04□□□□□ -1.12
COPS3-216ENST00000579716 ACAD11Q709F0 780 aa8.04□□□□□ -1.12
COPS3-216ENST00000579716 FILIP1Q7Z7B0 1213 aa8.04□□□□□ -1.12
COPS3-216ENST00000579716 SLC43A3Q8NBI5 491 aa8.04□□□□□ -1.12
COPS3-216ENST00000579716 UBASH3BQ8TF42 649 aa8.04□□□□□ -1.12
COPS3-216ENST00000579716 MYRFLQ96LU7 910 aa8.04□□□□□ -1.12
COPS3-216ENST00000579716 CTDP1Q9Y5B0 961 aaPredicted RBP8.04□□□□□ -1.12
COPS3-216ENST00000579716 SYNRGQ9UMZ2 1314 aa8.03□□□□□ -1.12
COPS3-216ENST00000579716 COL6A1P12109 1028 aa8.03□□□□□ -1.12
COPS3-216ENST00000579716 CDC27P30260 824 aa8.03□□□□□ -1.12
COPS3-216ENST00000579716 PSMC1P62191 440 aaKnown RBP8.03□□□□□ -1.12
COPS3-216ENST00000579716 BMS1Q14692 1282 aaKnown RBP8.03□□□□□ -1.12
COPS3-216ENST00000579716 CCSAPQ6IQ19 270 aaPredicted RBP8.03□□□□□ -1.12
COPS3-216ENST00000579716 C16orf46Q6P387 395 aa8.03□□□□□ -1.12
COPS3-216ENST00000579716 PAF1Q8N7H5 531 aa8.03□□□□□ -1.12
COPS3-216ENST00000579716 RUNDC1Q96C34 613 aa8.03□□□□□ -1.12
COPS3-216ENST00000579716 RBSNQ9H1K0 784 aa8.03□□□□□ -1.12
COPS3-216ENST00000579716 PUF60Q9UHX1 559 aaKnown RBP8.03□□□□□ -1.12
COPS3-216ENST00000579716 NOL7Q9UMY1 257 aaKnown RBP8.03□□□□□ -1.12
COPS3-216ENST00000579716 NOVA2Q9UNW9 492 aaKnown RBP8.03□□□□□ -1.12
COPS3-216ENST00000579716 NFKBIEO00221 500 aa8.02□□□□□ -1.13
COPS3-216ENST00000579716 SCAMP3O14828 347 aaKnown RBP8.02□□□□□ -1.13
COPS3-216ENST00000579716 TXKP42681 527 aa8.02□□□□□ -1.13
COPS3-216ENST00000579716 HYAL2Q12891 473 aa8.02□□□□□ -1.13
COPS3-216ENST00000579716 ZKSCAN8Q15776 578 aaPredicted RBP8.02□□□□□ -1.13
COPS3-216ENST00000579716 ZNF746Q6NUN9 644 aaPredicted RBP8.02□□□□□ -1.13
COPS3-216ENST00000579716 FAM20CQ8IXL6 584 aa8.02□□□□□ -1.13
COPS3-216ENST00000579716 PMFBP1Q8TBY8 1022 aa8.02□□□□□ -1.13
COPS3-216ENST00000579716 ENOX1Q8TC92 643 aaKnown RBP8.02□□□□□ -1.13
COPS3-216ENST00000579716 PPM1EQ8WY54 764 aa8.02□□□□□ -1.13
COPS3-216ENST00000579716 JDP2Q8WYK2 163 aa8.02□□□□□ -1.13
COPS3-216ENST00000579716 ZNF512BQ96KM6 892 aaPredicted RBP8.02□□□□□ -1.13
COPS3-216ENST00000579716 C8orf48Q96LL4 319 aa8.02□□□□□ -1.13
COPS3-216ENST00000579716 NEUROD6Q96NK8 337 aa8.02□□□□□ -1.13
COPS3-216ENST00000579716 PBX4Q9BYU1 374 aa8.02□□□□□ -1.13
COPS3-216ENST00000579716 ADAM19Q9H013 955 aa8.02□□□□□ -1.13
COPS3-216ENST00000579716 CASS4Q9NQ75 786 aa8.02□□□□□ -1.13
COPS3-216ENST00000579716 PLIN1O60240 522 aa8.01□□□□□ -1.13
COPS3-216ENST00000579716 DNAJC6O75061 913 aa8.01□□□□□ -1.13
COPS3-216ENST00000579716 PTCD1O75127 700 aaKnown RBP8.01□□□□□ -1.13
COPS3-216ENST00000579716 HMMRO75330 724 aa8.01□□□□□ -1.13
COPS3-216ENST00000579716 FGAP02671 866 aa8.01□□□□□ -1.13
COPS3-216ENST00000579716 HOXA10P31260 410 aaPredicted RBP8.01□□□□□ -1.13
COPS3-216ENST00000579716 KCTD2Q14681 263 aa8.01□□□□□ -1.13
COPS3-216ENST00000579716 NAA30Q147X3 362 aaPredicted RBP8.01□□□□□ -1.13
COPS3-216ENST00000579716 LCE1DQ5T752 114 aa8.01□□□□□ -1.13
COPS3-216ENST00000579716 TAF3Q5VWG9 929 aa8.01□□□□□ -1.13
COPS3-216ENST00000579716 HGSNATQ68CP4 663 aa8.01□□□□□ -1.13
COPS3-216ENST00000579716 ZSCAN30Q86W11 494 aa8.01□□□□□ -1.13
COPS3-216ENST00000579716 UTP4Q969X6 686 aaKnown RBP8.01□□□□□ -1.13
COPS3-216ENST00000579716 FAM83CQ9BQN1 747 aa8.01□□□□□ -1.13
COPS3-216ENST00000579716 CWC25Q9NXE8 425 aaPredicted RBP8.01□□□□□ -1.13
COPS3-216ENST00000579716 SLAIN2Q9P270 581 aa8.01□□□□□ -1.13
COPS3-216ENST00000579716 ADGRE2Q9UHX3 823 aa8.01□□□□□ -1.13
COPS3-216ENST00000579716 ACPPP15309 386 aa8□□□□□ -1.13
COPS3-216ENST00000579716 DUOXA2Q1HG44 320 aa8□□□□□ -1.13
COPS3-216ENST00000579716 SWI5Q1ZZU3 235 aa8□□□□□ -1.13
COPS3-216ENST00000579716 UVSSAQ2YD98 709 aa8□□□□□ -1.13
COPS3-216ENST00000579716 RPUSD2Q8IZ73 545 aaKnown RBP8□□□□□ -1.13
COPS3-216ENST00000579716 SHISA5Q8N114 240 aa8□□□□□ -1.13
COPS3-216ENST00000579716 ZNF513Q8N8E2 541 aaPredicted RBP8□□□□□ -1.13
COPS3-216ENST00000579716 PRPF38AQ8NAV1 312 aaKnown RBP8□□□□□ -1.13
COPS3-216ENST00000579716 SVIPQ8NHG7 77 aa8□□□□□ -1.13
COPS3-216ENST00000579716 DCAF11Q8TEB1 546 aa8□□□□□ -1.13
COPS3-216ENST00000579716 STK32AQ8WU08 396 aa8□□□□□ -1.13
COPS3-216ENST00000579716 CEP89Q96ST8 783 aa8□□□□□ -1.13
COPS3-216ENST00000579716 KRTAP4-7Q9BYR0 210 aa8□□□□□ -1.13
COPS3-216ENST00000579716 CEP41Q9BYV8 373 aa8□□□□□ -1.13
COPS3-216ENST00000579716 RAI14Q9P0K7 980 aa8□□□□□ -1.13
COPS3-216ENST00000579716 CNTN3Q9P232 1028 aa8□□□□□ -1.13
COPS3-216ENST00000579716 SOWAHDA6NJG2 315 aa7.99□□□□□ -1.13
COPS3-216ENST00000579716 LDHAP00338 332 aaKnown RBP7.99□□□□□ -1.13
COPS3-216ENST00000579716 VIL1P09327 827 aaKnown RBP7.99□□□□□ -1.13
COPS3-216ENST00000579716 ZAP70P43403 619 aa7.99□□□□□ -1.13
COPS3-216ENST00000579716 PREPP48147 710 aa7.99□□□□□ -1.13
COPS3-216ENST00000579716 ENOX2Q16206 610 aaKnown RBP7.99□□□□□ -1.13
COPS3-216ENST00000579716 C9orf131Q5VYM1 1079 aa7.99□□□□□ -1.13
COPS3-216ENST00000579716 NFXL1Q6ZNB6 911 aa7.99□□□□□ -1.13
COPS3-216ENST00000579716 CLEC10AQ8IUN9 316 aa7.99□□□□□ -1.13
COPS3-216ENST00000579716 TTC30BQ8N4P2 665 aa7.99□□□□□ -1.13
COPS3-216ENST00000579716 KLHL23Q8NBE8 558 aa7.99□□□□□ -1.13
COPS3-216ENST00000579716 SHKBP1Q8TBC3 707 aa7.99□□□□□ -1.13
COPS3-216ENST00000579716 GPR152Q8TDT2 470 aa7.99□□□□□ -1.13
COPS3-216ENST00000579716 RELTQ969Z4 430 aa7.99□□□□□ -1.13
COPS3-216ENST00000579716 DBNDD2Q9BQY9 259 aa7.99□□□□□ -1.13
COPS3-216ENST00000579716 AKAP2Q9Y2D5 859 aa7.99□□□□□ -1.13
COPS3-216ENST00000579716 MRVI1Q9Y6F6 885 aa7.99□□□□□ -1.13
COPS3-216ENST00000579716 LDHCP07864 332 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms