RNA–Protein interactions for RNA: ENST00000579339.5

LINC00271-205, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 397 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-205ENST00000579339 IGF2BP3O00425 579 aaKnown RBP eCLIP32.77■■■□□ 2.84
LINC00271-205ENST00000579339 ADGRA1Q86SQ6 560 aa32.77■■■□□ 2.84
LINC00271-205ENST00000579339 ANTXR1Q9H6X2 564 aa32.77■■■□□ 2.84
LINC00271-205ENST00000579339 MAST2Q6P0Q8 1798 aa32.77■■■□□ 2.84
LINC00271-205ENST00000579339 MYO5AQ9Y4I1 1855 aaKnown RBP32.76■■■□□ 2.84
LINC00271-205ENST00000579339 ATRNL1Q5VV63 1379 aa32.76■■■□□ 2.83
LINC00271-205ENST00000579339 DDTLA6NHG4 134 aaPredicted RBP32.76■■■□□ 2.83
LINC00271-205ENST00000579339 IFIT2P09913 472 aaKnown RBP32.76■■■□□ 2.83
LINC00271-205ENST00000579339 SLURP2P0DP57 97 aa32.76■■■□□ 2.83
LINC00271-205ENST00000579339 IFNL1Q8IU54 200 aa32.76■■■□□ 2.83
LINC00271-205ENST00000579339 AATFQ9NY61 560 aaKnown RBP eCLIP32.76■■■□□ 2.83
LINC00271-205ENST00000579339 SPDYE5A6NIY4 337 aa32.75■■■□□ 2.83
LINC00271-205ENST00000579339 IDH1O75874 414 aaKnown RBP32.75■■■□□ 2.83
LINC00271-205ENST00000579339 TEX11Q8IYF3 940 aa32.75■■■□□ 2.83
LINC00271-205ENST00000579339 SH3RF3Q8TEJ3 882 aaPredicted RBP32.75■■■□□ 2.83
LINC00271-205ENST00000579339 R3HDMLQ9H3Y0 253 aa32.75■■■□□ 2.83
LINC00271-205ENST00000579339 INHBEP58166 350 aa32.74■■■□□ 2.83
LINC00271-205ENST00000579339 NOL10Q9BSC4 688 aaKnown RBP32.74■■■□□ 2.83
LINC00271-205ENST00000579339 ZNF112Q9UJU3 913 aa32.74■■■□□ 2.83
LINC00271-205ENST00000579339 MS4A4AQ96JQ5 239 aa32.73■■■□□ 2.83
LINC00271-205ENST00000579339 DOCK2Q92608 1830 aa32.72■■■□□ 2.83
LINC00271-205ENST00000579339 ERO1BQ86YB8 467 aa32.72■■■□□ 2.83
LINC00271-205ENST00000579339 PTPN18Q99952 460 aa32.72■■■□□ 2.83
LINC00271-205ENST00000579339 SMARCA5O60264 1052 aaPredicted RBP32.71■■■□□ 2.83
LINC00271-205ENST00000579339 CYP7A1P22680 504 aa32.71■■■□□ 2.83
LINC00271-205ENST00000579339 BRI3BPQ8WY22 251 aa32.71■■■□□ 2.83
LINC00271-205ENST00000579339 LAMB1P07942 1786 aa32.7■■■□□ 2.83
LINC00271-205ENST00000579339 BAG3O95817 575 aa32.7■■■□□ 2.83
LINC00271-205ENST00000579339 MAP4K4O95819 1239 aaPredicted RBP32.7■■■□□ 2.83
LINC00271-205ENST00000579339 CCL15-CCL14A0A0B4J2E2 113 aa32.69■■■□□ 2.82
LINC00271-205ENST00000579339 TESPA1A2RU30 521 aaPredicted RBP32.69■■■□□ 2.82
LINC00271-205ENST00000579339 ALDH1A1P00352 501 aa32.69■■■□□ 2.82
LINC00271-205ENST00000579339 DGKZQ13574 1117 aa32.69■■■□□ 2.82
LINC00271-205ENST00000579339 CCL15Q16663 113 aa32.69■■■□□ 2.82
LINC00271-205ENST00000579339 MAGEB6Q8N7X4 407 aa32.69■■■□□ 2.82
LINC00271-205ENST00000579339 ZNF296Q8WUU4 475 aaPredicted RBP32.69■■■□□ 2.82
LINC00271-205ENST00000579339 DNAJC2Q99543 621 aaKnown RBP32.69■■■□□ 2.82
LINC00271-205ENST00000579339 LRRCC1Q9C099 1032 aa32.69■■■□□ 2.82
LINC00271-205ENST00000579339 MCOLN1Q9GZU1 580 aa32.69■■■□□ 2.82
LINC00271-205ENST00000579339 OSBPL5Q9H0X9 879 aaPredicted RBP32.69■■■□□ 2.82
LINC00271-205ENST00000579339 GPR25O00155 361 aa32.68■■■□□ 2.82
LINC00271-205ENST00000579339 IRF6O14896 467 aa32.68■■■□□ 2.82
LINC00271-205ENST00000579339 NPM3O75607 178 aaKnown RBP32.68■■■□□ 2.82
LINC00271-205ENST00000579339 GTF2A2P52657 109 aa32.68■■■□□ 2.82
LINC00271-205ENST00000579339 PPP4CP60510 307 aa32.68■■■□□ 2.82
LINC00271-205ENST00000579339 DYNLL1P63167 89 aaKnown RBP32.68■■■□□ 2.82
LINC00271-205ENST00000579339 CRBNQ96SW2 442 aa32.68■■■□□ 2.82
LINC00271-205ENST00000579339 PCDHB15Q9Y5E8 787 aa32.68■■■□□ 2.82
LINC00271-205ENST00000579339 PHF20L1A8MW92 1017 aa32.67■■■□□ 2.82
LINC00271-205ENST00000579339 PPIL2Q13356 520 aa32.67■■■□□ 2.82
LINC00271-205ENST00000579339 ABHD8Q96I13 439 aa32.67■■■□□ 2.82
LINC00271-205ENST00000579339 CFHR5Q9BXR6 569 aa32.67■■■□□ 2.82
LINC00271-205ENST00000579339 FAM196BA6NMK8 535 aa32.66■■■□□ 2.82
LINC00271-205ENST00000579339 MAP3K12Q12852 859 aa32.66■■■□□ 2.82
LINC00271-205ENST00000579339 NOL9Q5SY16 702 aaKnown RBP32.66■■■□□ 2.82
LINC00271-205ENST00000579339 OTUD7BQ6GQQ9 843 aa32.66■■■□□ 2.82
LINC00271-205ENST00000579339 MAPKAPK5Q8IW41 473 aa32.66■■■□□ 2.82
LINC00271-205ENST00000579339 MIGA1Q8NAN2 632 aa32.66■■■□□ 2.82
LINC00271-205ENST00000579339 TGFBRAP1Q8WUH2 860 aa32.66■■■□□ 2.82
LINC00271-205ENST00000579339 EDC3Q96F86 508 aaKnown RBP32.66■■■□□ 2.82
LINC00271-205ENST00000579339 GOLIM4O00461 696 aa32.65■■■□□ 2.82
LINC00271-205ENST00000579339 IGSF3O75054 1194 aa32.65■■■□□ 2.82
LINC00271-205ENST00000579339 PLCG2P16885 1265 aa32.65■■■□□ 2.82
LINC00271-205ENST00000579339 PPIL4Q8WUA2 492 aaKnown RBP eCLIP32.65■■■□□ 2.82
LINC00271-205ENST00000579339 DCTPP1Q9H773 170 aa32.65■■■□□ 2.82
LINC00271-205ENST00000579339 MAP3K10Q02779 954 aa32.64■■■□□ 2.82
LINC00271-205ENST00000579339 PPATQ06203 517 aa32.64■■■□□ 2.82
LINC00271-205ENST00000579339 BOLA2Q9H3K6 86 aa32.64■■■□□ 2.82
LINC00271-205ENST00000579339 CRHR2Q13324 411 aa32.63■■■□□ 2.81
LINC00271-205ENST00000579339 FAM43AQ8N2R8 423 aa32.63■■■□□ 2.81
LINC00271-205ENST00000579339 COL2A1P02458 1487 aaPredicted RBP32.62■■■□□ 2.81
LINC00271-205ENST00000579339 FLT1P17948 1338 aa32.62■■■□□ 2.81
LINC00271-205ENST00000579339 SNAPC2Q13487 334 aa32.62■■■□□ 2.81
LINC00271-205ENST00000579339 TTF1Q15361 905 aaPredicted RBP32.62■■■□□ 2.81
LINC00271-205ENST00000579339 SCYL3Q8IZE3 742 aa32.62■■■□□ 2.81
LINC00271-205ENST00000579339 CETPP11597 493 aa32.61■■■□□ 2.81
LINC00271-205ENST00000579339 NOM1Q5C9Z4 860 aaKnown RBP32.61■■■□□ 2.81
LINC00271-205ENST00000579339 XPO5Q9HAV4 1204 aaKnown RBP eCLIP32.61■■■□□ 2.81
LINC00271-205ENST00000579339 FKTNO75072 461 aa32.6■■■□□ 2.81
LINC00271-205ENST00000579339 ATP5JP18859 108 aa32.6■■■□□ 2.81
LINC00271-205ENST00000579339 CTU1Q7Z7A3 348 aaKnown RBP32.6■■■□□ 2.81
LINC00271-205ENST00000579339 PICK1Q9NRD5 415 aa32.6■■■□□ 2.81
LINC00271-205ENST00000579339 FRMD4AQ9P2Q2 1039 aaPredicted RBP32.6■■■□□ 2.81
LINC00271-205ENST00000579339 TBC1D12O60347 775 aa32.59■■■□□ 2.81
LINC00271-205ENST00000579339 SAP30BPQ9UHR5 308 aaKnown RBP32.59■■■□□ 2.81
LINC00271-205ENST00000579339 BTBD19C9JJ37 291 aa32.58■■■□□ 2.81
LINC00271-205ENST00000579339 PDE6AP16499 860 aa32.58■■■□□ 2.81
LINC00271-205ENST00000579339 TAF1CQ15572 869 aaPredicted RBP32.58■■■□□ 2.81
LINC00271-205ENST00000579339 SLC9C2Q5TAH2 1124 aa32.58■■■□□ 2.81
LINC00271-205ENST00000579339 PAG1Q9NWQ8 432 aa32.58■■■□□ 2.81
LINC00271-205ENST00000579339 CDK5RAP2Q96SN8 1893 aa32.58■■■□□ 2.81
LINC00271-205ENST00000579339 SLC4A8Q2Y0W8 1093 aa32.57■■■□□ 2.8
LINC00271-205ENST00000579339 CCDC84Q86UT8 332 aaPredicted RBP32.57■■■□□ 2.8
LINC00271-205ENST00000579339 PALD1Q9ULE6 856 aa32.57■■■□□ 2.8
LINC00271-205ENST00000579339 KCNH4Q9UQ05 1017 aa32.57■■■□□ 2.8
LINC00271-205ENST00000579339 CTNND1O60716 968 aaKnown RBP32.56■■■□□ 2.8
LINC00271-205ENST00000579339 PTPRAP18433 802 aa32.56■■■□□ 2.8
LINC00271-205ENST00000579339 HAUS7Q99871 368 aa32.56■■■□□ 2.8
LINC00271-205ENST00000579339 ZHX2Q9Y6X8 837 aa32.56■■■□□ 2.8
LINC00271-205ENST00000579339 ZNF532Q9HCE3 1301 aa32.55■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms