RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 ZFPM1Q8IX07 1006 aa29.1■■■□□ 2.25
LIMD2-207ENST00000579329 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.1■■■□□ 2.25
LIMD2-207ENST00000579329 DDX4Q9NQI0 724 aaKnown RBP29.1■■■□□ 2.25
LIMD2-207ENST00000579329 AATFQ9NY61 560 aaKnown RBP eCLIP29.1■■■□□ 2.25
LIMD2-207ENST00000579329 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.1■■■□□ 2.25
LIMD2-207ENST00000579329 GOLIM4O00461 696 aa29.09■■■□□ 2.25
LIMD2-207ENST00000579329 PPP4CP60510 307 aa29.09■■■□□ 2.25
LIMD2-207ENST00000579329 DGKZQ13574 1117 aa29.09■■■□□ 2.25
LIMD2-207ENST00000579329 SPRYD7Q5W111 196 aa29.09■■■□□ 2.25
LIMD2-207ENST00000579329 ADGRA1Q86SQ6 560 aa29.09■■■□□ 2.25
LIMD2-207ENST00000579329 TEX11Q8IYF3 940 aa29.09■■■□□ 2.25
LIMD2-207ENST00000579329 MAGEB6Q8N7X4 407 aa29.09■■■□□ 2.25
LIMD2-207ENST00000579329 ZNF341Q9BYN7 854 aa29.09■■■□□ 2.25
LIMD2-207ENST00000579329 BOLA2Q9H3K6 86 aa29.09■■■□□ 2.25
LIMD2-207ENST00000579329 AK9Q5TCS8 1911 aa29.08■■■□□ 2.25
LIMD2-207ENST00000579329 MKRN3Q13064 507 aaKnown RBP29.08■■■□□ 2.25
LIMD2-207ENST00000579329 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.08■■■□□ 2.25
LIMD2-207ENST00000579329 ZSCAN29Q8IWY8 852 aaPredicted RBP29.08■■■□□ 2.25
LIMD2-207ENST00000579329 EXOC6Q8TAG9 804 aa29.08■■■□□ 2.25
LIMD2-207ENST00000579329 GPATCH3Q96I76 525 aa29.08■■■□□ 2.25
LIMD2-207ENST00000579329 WNK4Q96J92 1243 aa29.08■■■□□ 2.25
LIMD2-207ENST00000579329 CSRNP1Q96S65 589 aa29.08■■■□□ 2.25
LIMD2-207ENST00000579329 CSADQ9Y600 493 aa29.08■■■□□ 2.25
LIMD2-207ENST00000579329 ZBTB48P10074 688 aaPredicted RBP29.07■■■□□ 2.24
LIMD2-207ENST00000579329 MIGA2Q7L4E1 593 aa29.07■■■□□ 2.24
LIMD2-207ENST00000579329 SH3RF3Q8TEJ3 882 aaPredicted RBP29.07■■■□□ 2.24
LIMD2-207ENST00000579329 WRNIP1Q96S55 665 aa29.07■■■□□ 2.24
LIMD2-207ENST00000579329 HAUS7Q99871 368 aa29.07■■■□□ 2.24
LIMD2-207ENST00000579329 ECHDC1Q9NTX5 307 aa29.07■■■□□ 2.24
LIMD2-207ENST00000579329 TNRC18O15417 2968 aaPredicted RBP29.06■■■□□ 2.24
LIMD2-207ENST00000579329 VGLL4Q14135 290 aa29.06■■■□□ 2.24
LIMD2-207ENST00000579329 ELP3Q9H9T3 547 aa29.06■■■□□ 2.24
LIMD2-207ENST00000579329 PAG1Q9NWQ8 432 aa29.06■■■□□ 2.24
LIMD2-207ENST00000579329 PDE4DIPQ5VU43 2346 aa29.05■■■□□ 2.24
LIMD2-207ENST00000579329 COL2A1P02458 1487 aaPredicted RBP29.05■■■□□ 2.24
LIMD2-207ENST00000579329 SH3BP5LQ7L8J4 393 aa29.05■■■□□ 2.24
LIMD2-207ENST00000579329 CERS3Q8IU89 383 aa29.05■■■□□ 2.24
LIMD2-207ENST00000579329 GCC1Q96CN9 775 aa29.05■■■□□ 2.24
LIMD2-207ENST00000579329 ATRNL1Q5VV63 1379 aa29.04■■■□□ 2.24
LIMD2-207ENST00000579329 DDTLA6NHG4 134 aaPredicted RBP29.04■■■□□ 2.24
LIMD2-207ENST00000579329 SREBF2Q12772 1141 aa29.04■■■□□ 2.24
LIMD2-207ENST00000579329 EDC3Q96F86 508 aaKnown RBP29.04■■■□□ 2.24
LIMD2-207ENST00000579329 OSBPL5Q9H0X9 879 aaPredicted RBP29.04■■■□□ 2.24
LIMD2-207ENST00000579329 ZBTB47Q9UFB7 747 aaPredicted RBP29.04■■■□□ 2.24
LIMD2-207ENST00000579329 SAGE1Q9NXZ1 904 aa29.03■■■□□ 2.24
LIMD2-207ENST00000579329 MANSC4A6NHS7 340 aaPredicted RBP29.02■■■□□ 2.24
LIMD2-207ENST00000579329 PDE6AP16499 860 aa29.02■■■□□ 2.24
LIMD2-207ENST00000579329 DYNLL1P63167 89 aaKnown RBP29.02■■■□□ 2.24
LIMD2-207ENST00000579329 SLC9C2Q5TAH2 1124 aa29.02■■■□□ 2.24
LIMD2-207ENST00000579329 MIGA1Q8NAN2 632 aa29.02■■■□□ 2.24
LIMD2-207ENST00000579329 OPTNQ96CV9 577 aa29.02■■■□□ 2.24
LIMD2-207ENST00000579329 ZNF112Q9UJU3 913 aa29.02■■■□□ 2.24
LIMD2-207ENST00000579329 TM4SF4P48230 202 aa29.01■■■□□ 2.23
LIMD2-207ENST00000579329 TGFBRAP1Q8WUH2 860 aa29.01■■■□□ 2.23
LIMD2-207ENST00000579329 RWDD1Q9H446 243 aaPredicted RBP29.01■■■□□ 2.23
LIMD2-207ENST00000579329 SNCAIPQ9Y6H5 919 aa29.01■■■□□ 2.23
LIMD2-207ENST00000579329 GJA5P36382 358 aa29■■■□□ 2.23
LIMD2-207ENST00000579329 ZKSCAN4Q969J2 545 aaPredicted RBP29■■■□□ 2.23
LIMD2-207ENST00000579329 DDX24Q9GZR7 859 aaKnown RBP eCLIP29■■■□□ 2.23
LIMD2-207ENST00000579329 RNF186Q9NXI6 227 aa29■■■□□ 2.23
LIMD2-207ENST00000579329 TTC41PQ6P2S7 1318 aa28.99■■■□□ 2.23
LIMD2-207ENST00000579329 LAMB1P07942 1786 aa28.99■■■□□ 2.23
LIMD2-207ENST00000579329 SPDYE5A6NIY4 337 aa28.99■■■□□ 2.23
LIMD2-207ENST00000579329 INPP5BP32019 993 aa28.99■■■□□ 2.23
LIMD2-207ENST00000579329 INHBEP58166 350 aa28.99■■■□□ 2.23
LIMD2-207ENST00000579329 ANKRD45Q5TZF3 282 aa28.99■■■□□ 2.23
LIMD2-207ENST00000579329 MAPKAPK5Q8IW41 473 aa28.99■■■□□ 2.23
LIMD2-207ENST00000579329 FLT1P17948 1338 aa28.98■■■□□ 2.23
LIMD2-207ENST00000579329 ZNF532Q9HCE3 1301 aa28.98■■■□□ 2.23
LIMD2-207ENST00000579329 MAP3K10Q02779 954 aa28.98■■■□□ 2.23
LIMD2-207ENST00000579329 ERO1BQ86YB8 467 aa28.98■■■□□ 2.23
LIMD2-207ENST00000579329 FOCADQ5VW36 1801 aa28.98■■■□□ 2.23
LIMD2-207ENST00000579329 CDK5RAP2Q96SN8 1893 aa28.97■■■□□ 2.23
LIMD2-207ENST00000579329 TRPA1O75762 1119 aa28.97■■■□□ 2.23
LIMD2-207ENST00000579329 NOL9Q5SY16 702 aaKnown RBP28.97■■■□□ 2.23
LIMD2-207ENST00000579329 TSHZ3Q63HK5 1081 aa28.97■■■□□ 2.23
LIMD2-207ENST00000579329 CNKSR2Q8WXI2 1034 aa28.97■■■□□ 2.23
LIMD2-207ENST00000579329 OTUD5Q96G74 571 aa28.97■■■□□ 2.23
LIMD2-207ENST00000579329 DHX36Q9H2U1 1008 aaKnown RBP28.97■■■□□ 2.23
LIMD2-207ENST00000579329 MAGEB6P1A0A0J9YX57 407 aa28.96■■■□□ 2.23
LIMD2-207ENST00000579329 TCRBV5S4A2TA0A5A2 114 aa28.96■■■□□ 2.23
LIMD2-207ENST00000579329 ERC2O15083 957 aa28.96■■■□□ 2.23
LIMD2-207ENST00000579329 TBC1D12O60347 775 aa28.96■■■□□ 2.23
LIMD2-207ENST00000579329 ADD2P35612 726 aa28.96■■■□□ 2.23
LIMD2-207ENST00000579329 RIOK1Q9BRS2 568 aaKnown RBP28.96■■■□□ 2.23
LIMD2-207ENST00000579329 OTUD7AQ8TE49 926 aaPredicted RBP28.95■■■□□ 2.22
LIMD2-207ENST00000579329 PHF20L1A8MW92 1017 aa28.94■■■□□ 2.22
LIMD2-207ENST00000579329 MX1P20591 662 aa28.94■■■□□ 2.22
LIMD2-207ENST00000579329 USP5P45974 858 aa28.94■■■□□ 2.22
LIMD2-207ENST00000579329 ZSCAN25Q6NSZ9 544 aa28.94■■■□□ 2.22
LIMD2-207ENST00000579329 SMC5Q8IY18 1101 aa28.94■■■□□ 2.22
LIMD2-207ENST00000579329 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.94■■■□□ 2.22
LIMD2-207ENST00000579329 GLRX3O76003 335 aaKnown RBP28.93■■■□□ 2.22
LIMD2-207ENST00000579329 IRX6P78412 446 aaPredicted RBP28.93■■■□□ 2.22
LIMD2-207ENST00000579329 PPIL2Q13356 520 aa28.93■■■□□ 2.22
LIMD2-207ENST00000579329 PI4KBQ9UBF8 816 aa28.93■■■□□ 2.22
LIMD2-207ENST00000579329 ALDH1A1P00352 501 aa28.92■■■□□ 2.22
LIMD2-207ENST00000579329 SLURP2P0DP57 97 aa28.92■■■□□ 2.22
LIMD2-207ENST00000579329 GTF2A2P52657 109 aa28.92■■■□□ 2.22
LIMD2-207ENST00000579329 PPATQ06203 517 aa28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms