RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 HTATIP2Q9BUP3 242 aa10.65□□□□□ -0.7
CASC3-206ENST00000579238 RNF208Q9H0X6 261 aa10.65□□□□□ -0.7
CASC3-206ENST00000579238 BIN2Q9UBW5 565 aaPredicted RBP10.65□□□□□ -0.7
CASC3-206ENST00000579238 SLC45A1Q9Y2W3 748 aa10.65□□□□□ -0.7
CASC3-206ENST00000579238 ZHX2Q9Y6X8 837 aa10.65□□□□□ -0.7
CASC3-206ENST00000579238 ZNF316A6NFI3 1004 aaPredicted RBP10.64□□□□□ -0.71
CASC3-206ENST00000579238 PTPRAP18433 802 aa10.64□□□□□ -0.71
CASC3-206ENST00000579238 SLFN5Q08AF3 891 aa10.64□□□□□ -0.71
CASC3-206ENST00000579238 ZSCAN29Q8IWY8 852 aaPredicted RBP10.64□□□□□ -0.71
CASC3-206ENST00000579238 SLF2Q8IX21 1173 aa10.64□□□□□ -0.71
CASC3-206ENST00000579238 SMC4Q9NTJ3 1288 aa10.64□□□□□ -0.71
CASC3-206ENST00000579238 GABRQQ9UN88 632 aa10.64□□□□□ -0.71
CASC3-206ENST00000579238 HDAC5Q9UQL6 1122 aa10.64□□□□□ -0.71
CASC3-206ENST00000579238 AFG3L2Q9Y4W6 797 aa10.64□□□□□ -0.71
CASC3-206ENST00000579238 RFX7Q2KHR2 1363 aa10.64□□□□□ -0.71
CASC3-206ENST00000579238 TRIOBPQ9H2D6 2365 aa10.63□□□□□ -0.71
CASC3-206ENST00000579238 CTNND1O60716 968 aaKnown RBP10.63□□□□□ -0.71
CASC3-206ENST00000579238 CAPN2P17655 700 aa10.63□□□□□ -0.71
CASC3-206ENST00000579238 CCDC102BQ68D86 513 aa10.63□□□□□ -0.71
CASC3-206ENST00000579238 GADL1Q6ZQY3 521 aa10.63□□□□□ -0.71
CASC3-206ENST00000579238 SH3BP5LQ7L8J4 393 aa10.63□□□□□ -0.71
CASC3-206ENST00000579238 DZIP1Q86YF9 867 aaKnown RBP10.63□□□□□ -0.71
CASC3-206ENST00000579238 U2AF1L4Q8WU68 220 aaKnown RBP10.63□□□□□ -0.71
CASC3-206ENST00000579238 FAM163AQ96GL9 167 aaPredicted RBP10.63□□□□□ -0.71
CASC3-206ENST00000579238 RBM27Q9P2N5 1060 aaKnown RBP10.63□□□□□ -0.71
CASC3-206ENST00000579238 NR2E3Q9Y5X4 410 aa10.63□□□□□ -0.71
CASC3-206ENST00000579238 LRRFIP2Q9Y608 721 aaKnown RBP10.63□□□□□ -0.71
CASC3-206ENST00000579238 CEP290O15078 2479 aa10.63□□□□□ -0.71
CASC3-206ENST00000579238 PDS5AQ29RF7 1337 aaKnown RBP10.62□□□□□ -0.71
CASC3-206ENST00000579238 DDTLA6NHG4 134 aaPredicted RBP10.62□□□□□ -0.71
CASC3-206ENST00000579238 ADCY3O60266 1144 aa10.62□□□□□ -0.71
CASC3-206ENST00000579238 FARP2O94887 1054 aaPredicted RBP10.62□□□□□ -0.71
CASC3-206ENST00000579238 SGPL1O95470 568 aa10.62□□□□□ -0.71
CASC3-206ENST00000579238 ADORA1P30542 326 aa10.62□□□□□ -0.71
CASC3-206ENST00000579238 FLT3LGP49771 235 aa10.62□□□□□ -0.71
CASC3-206ENST00000579238 IRF5Q13568 498 aa10.62□□□□□ -0.71
CASC3-206ENST00000579238 SPTY2D1Q68D10 685 aaPredicted RBP10.62□□□□□ -0.71
CASC3-206ENST00000579238 PXYLP1Q8TE99 480 aa10.62□□□□□ -0.71
CASC3-206ENST00000579238 SMCR8Q8TEV9 937 aaPredicted RBP10.62□□□□□ -0.71
CASC3-206ENST00000579238 UNC93B1Q9H1C4 597 aa10.62□□□□□ -0.71
CASC3-206ENST00000579238 PRO3102Q9H379 93 aa10.62□□□□□ -0.71
CASC3-206ENST00000579238 COPRSQ9NQ92 184 aa10.62□□□□□ -0.71
CASC3-206ENST00000579238 ABCF2Q9UG63 623 aa10.62□□□□□ -0.71
CASC3-206ENST00000579238 PA2G4Q9UQ80 394 aaKnown RBP10.62□□□□□ -0.71
CASC3-206ENST00000579238 DOCK2Q92608 1830 aa10.61□□□□□ -0.71
CASC3-206ENST00000579238 MYH2Q9UKX2 1941 aa10.61□□□□□ -0.71
CASC3-206ENST00000579238 TRIM75PA6NK02 468 aa10.61□□□□□ -0.71
CASC3-206ENST00000579238 TNPO2O14787 897 aaKnown RBP10.61□□□□□ -0.71
CASC3-206ENST00000579238 ZBTB7BO15156 539 aaPredicted RBP10.61□□□□□ -0.71
CASC3-206ENST00000579238 TBC1D12O60347 775 aa10.61□□□□□ -0.71
CASC3-206ENST00000579238 INHAP05111 366 aa10.61□□□□□ -0.71
CASC3-206ENST00000579238 BTDP43251 543 aa10.61□□□□□ -0.71
CASC3-206ENST00000579238 RASGRF1Q13972 1273 aa10.61□□□□□ -0.71
CASC3-206ENST00000579238 API5Q9BZZ5 524 aaKnown RBP10.61□□□□□ -0.71
CASC3-206ENST00000579238 DDX4Q9NQI0 724 aaKnown RBP10.61□□□□□ -0.71
CASC3-206ENST00000579238 AGTPBP1Q9UPW5 1226 aa10.61□□□□□ -0.71
CASC3-206ENST00000579238 MGAMO43451 1857 aa10.61□□□□□ -0.71
CASC3-206ENST00000579238 MROH7-TTC4A0A0A0MT08 1334 aa10.6□□□□□ -0.71
CASC3-206ENST00000579238 GPR75-ASB3A0A0A6YYF3 556 aa10.6□□□□□ -0.71
CASC3-206ENST00000579238 NPM3O75607 178 aaKnown RBP10.6□□□□□ -0.71
CASC3-206ENST00000579238 CT47B1P0C2W7 299 aaPredicted RBP10.6□□□□□ -0.71
CASC3-206ENST00000579238 SLURP2P0DP57 97 aa10.6□□□□□ -0.71
CASC3-206ENST00000579238 ELNP15502 786 aa10.6□□□□□ -0.71
CASC3-206ENST00000579238 RHBDL3P58872 404 aa10.6□□□□□ -0.71
CASC3-206ENST00000579238 TIMM10P62072 90 aa10.6□□□□□ -0.71
CASC3-206ENST00000579238 PICALMQ13492 652 aa10.6□□□□□ -0.71
CASC3-206ENST00000579238 MVPQ14764 893 aaKnown RBP10.6□□□□□ -0.71
CASC3-206ENST00000579238 ERICH6Q7L0X2 663 aa10.6□□□□□ -0.71
CASC3-206ENST00000579238 TRMT2AQ8IZ69 625 aaKnown RBP10.6□□□□□ -0.71
CASC3-206ENST00000579238 COA7Q96BR5 231 aa10.6□□□□□ -0.71
CASC3-206ENST00000579238 PNMA3Q9UL41 463 aa10.6□□□□□ -0.71
CASC3-206ENST00000579238 NOB1Q9ULX3 412 aaKnown RBP10.6□□□□□ -0.71
CASC3-206ENST00000579238 AKAP2Q9Y2D5 859 aa10.6□□□□□ -0.71
CASC3-206ENST00000579238 SZT2Q5T011 3432 aa10.59□□□□□ -0.71
CASC3-206ENST00000579238 A0A1B0GUL7 405 aa10.59□□□□□ -0.71
CASC3-206ENST00000579238 MAP4K4O95819 1239 aaPredicted RBP10.59□□□□□ -0.71
CASC3-206ENST00000579238 TFRCP02786 760 aaKnown RBP10.59□□□□□ -0.71
CASC3-206ENST00000579238 MECOMQ03112 1051 aa10.59□□□□□ -0.71
CASC3-206ENST00000579238 FAM110CQ1W6H9 321 aa10.59□□□□□ -0.71
CASC3-206ENST00000579238 ANKRD13CQ8N6S4 541 aa10.59□□□□□ -0.71
CASC3-206ENST00000579238 PROCA1Q8NCQ7 364 aaPredicted RBP10.59□□□□□ -0.71
CASC3-206ENST00000579238 CDCA7LQ96GN5 454 aa10.59□□□□□ -0.71
CASC3-206ENST00000579238 XAGE2Q96GT9 111 aa10.59□□□□□ -0.71
CASC3-206ENST00000579238 DEFB118Q96PH6 123 aa10.59□□□□□ -0.71
CASC3-206ENST00000579238 MEIS3Q99687 375 aa10.59□□□□□ -0.71
CASC3-206ENST00000579238 TBC1D2Q9BYX2 928 aa10.59□□□□□ -0.71
CASC3-206ENST00000579238 CRISPLD2Q9H0B8 497 aa10.59□□□□□ -0.71
CASC3-206ENST00000579238 OSBPL5Q9H0X9 879 aaPredicted RBP10.59□□□□□ -0.71
CASC3-206ENST00000579238 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.59□□□□□ -0.71
CASC3-206ENST00000579238 PAK6Q9NQU5 681 aaPredicted RBP10.59□□□□□ -0.71
CASC3-206ENST00000579238 DOCK1Q14185 1865 aa10.59□□□□□ -0.71
CASC3-206ENST00000579238 RANBP2P49792 3224 aaKnown RBP10.59□□□□□ -0.71
CASC3-206ENST00000579238 PTPRFP10586 1907 aa10.58□□□□□ -0.72
CASC3-206ENST00000579238 A0A1W2PPC1 479 aa10.58□□□□□ -0.72
CASC3-206ENST00000579238 EVI5O60447 810 aa10.58□□□□□ -0.72
CASC3-206ENST00000579238 LDHCP07864 332 aa10.58□□□□□ -0.72
CASC3-206ENST00000579238 GCLCP48506 637 aaPredicted RBP10.58□□□□□ -0.72
CASC3-206ENST00000579238 GSTO1P78417 241 aa10.58□□□□□ -0.72
CASC3-206ENST00000579238 TREML2Q5T2D2 321 aa10.58□□□□□ -0.72
CASC3-206ENST00000579238 CCDC84Q86UT8 332 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms