RNA–Protein interactions for RNA: ENST00000578861.5

SNX11-205, Transcript of sorting nexin 11, humanhuman

TSL 4

Gene SNX11, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-205ENST00000578861 SERPINA10Q9UK55 444 aa11.25□□□□□ -0.61
SNX11-205ENST00000578861 NCOR1O75376 2440 aa11.25□□□□□ -0.61
SNX11-205ENST00000578861 CYP2B6P20813 491 aa11.24□□□□□ -0.61
SNX11-205ENST00000578861 CRKP46108 304 aa11.24□□□□□ -0.61
SNX11-205ENST00000578861 TWISTNBQ3B726 338 aaPredicted RBP11.24□□□□□ -0.61
SNX11-205ENST00000578861 CCDC184Q52MB2 194 aa11.24□□□□□ -0.61
SNX11-205ENST00000578861 FASTKD5Q7L8L6 764 aaKnown RBP11.24□□□□□ -0.61
SNX11-205ENST00000578861 PRDM12Q9H4Q4 367 aa11.24□□□□□ -0.61
SNX11-205ENST00000578861 H7C1W4 665 aa11.23□□□□□ -0.61
SNX11-205ENST00000578861 TAF5LO75529 589 aa11.23□□□□□ -0.61
SNX11-205ENST00000578861 DNAJB2P25686 324 aa11.23□□□□□ -0.61
SNX11-205ENST00000578861 RTP1P59025 263 aa11.23□□□□□ -0.61
SNX11-205ENST00000578861 FKBP1AP62942 108 aaKnown RBP11.23□□□□□ -0.61
SNX11-205ENST00000578861 MFSD14BQ5SR56 506 aa11.23□□□□□ -0.61
SNX11-205ENST00000578861 TRIB2Q92519 343 aa11.23□□□□□ -0.61
SNX11-205ENST00000578861 UIMC1Q96RL1 719 aa11.23□□□□□ -0.61
SNX11-205ENST00000578861 TSPYL2Q9H2G4 693 aaPredicted RBP11.23□□□□□ -0.61
SNX11-205ENST00000578861 TMOD2Q9NZR1 351 aa11.23□□□□□ -0.61
SNX11-205ENST00000578861 DDX60LQ5H9U9 1706 aaKnown RBP11.23□□□□□ -0.61
SNX11-205ENST00000578861 A0A1B0GUL6 1792 aa11.23□□□□□ -0.61
SNX11-205ENST00000578861 CXCL11O14625 94 aa11.22□□□□□ -0.61
SNX11-205ENST00000578861 BMP1P13497 986 aa11.22□□□□□ -0.61
SNX11-205ENST00000578861 ITGA6P23229 1130 aa11.22□□□□□ -0.61
SNX11-205ENST00000578861 TFF2Q03403 129 aa11.22□□□□□ -0.61
SNX11-205ENST00000578861 GCKRQ14397 625 aa11.22□□□□□ -0.61
SNX11-205ENST00000578861 AKNAD1Q5T1N1 836 aa11.22□□□□□ -0.61
SNX11-205ENST00000578861 ECM29Q5VYK3 1845 aa11.22□□□□□ -0.61
SNX11-205ENST00000578861 WWC1Q8IX03 1113 aa11.22□□□□□ -0.61
SNX11-205ENST00000578861 MICALL1Q8N3F8 863 aa11.22□□□□□ -0.61
SNX11-205ENST00000578861 TIFAQ96CG3 184 aa11.22□□□□□ -0.61
SNX11-205ENST00000578861 CDH23Q9H251 3354 aa11.22□□□□□ -0.61
SNX11-205ENST00000578861 SALL2Q9Y467 1007 aaPredicted RBP11.22□□□□□ -0.61
SNX11-205ENST00000578861 ZHX2Q9Y6X8 837 aa11.22□□□□□ -0.61
SNX11-205ENST00000578861 SMIM22K7EJ46 135 aa11.21□□□□□ -0.61
SNX11-205ENST00000578861 IL1R1P14778 569 aa11.21□□□□□ -0.61
SNX11-205ENST00000578861 CCND3P30281 292 aaPredicted RBP11.21□□□□□ -0.61
SNX11-205ENST00000578861 KCNQ1P51787 676 aa11.21□□□□□ -0.61
SNX11-205ENST00000578861 CHRNDQ07001 517 aa11.21□□□□□ -0.61
SNX11-205ENST00000578861 FLIIQ13045 1269 aa11.21□□□□□ -0.61
SNX11-205ENST00000578861 FKBP5Q13451 457 aaPredicted RBP11.21□□□□□ -0.61
SNX11-205ENST00000578861 SKIV2LQ15477 1246 aaKnown RBP11.21□□□□□ -0.61
SNX11-205ENST00000578861 GJD2Q9UKL4 321 aa11.21□□□□□ -0.61
SNX11-205ENST00000578861 GPR37L1O60883 481 aa11.2□□□□□ -0.62
SNX11-205ENST00000578861 CACNB2Q08289 660 aaPredicted RBP11.2□□□□□ -0.62
SNX11-205ENST00000578861 LHX8Q68G74 356 aa11.2□□□□□ -0.62
SNX11-205ENST00000578861 DNAAF4Q8WXU2 420 aa11.2□□□□□ -0.62
SNX11-205ENST00000578861 MYH16Q9H6N6 1097 aa11.2□□□□□ -0.62
SNX11-205ENST00000578861 RTN4Q9NQC3 1192 aaKnown RBP11.2□□□□□ -0.62
SNX11-205ENST00000578861 CHMP3Q9Y3E7 222 aa11.2□□□□□ -0.62
SNX11-205ENST00000578861 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.19□□□□□ -0.62
SNX11-205ENST00000578861 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.19□□□□□ -0.62
SNX11-205ENST00000578861 PLIN1O60240 522 aa11.19□□□□□ -0.62
SNX11-205ENST00000578861 CSF1RP07333 972 aa11.19□□□□□ -0.62
SNX11-205ENST00000578861 CCDC27Q2M243 656 aa11.19□□□□□ -0.62
SNX11-205ENST00000578861 AAK1Q2M2I8 961 aa11.19□□□□□ -0.62
SNX11-205ENST00000578861 MAP3K21Q5TCX8 1036 aa11.19□□□□□ -0.62
SNX11-205ENST00000578861 CCDC129Q6ZRS4 1044 aa11.19□□□□□ -0.62
SNX11-205ENST00000578861 C11orf16Q9NQ32 467 aa11.19□□□□□ -0.62
SNX11-205ENST00000578861 PICK1Q9NRD5 415 aa11.19□□□□□ -0.62
SNX11-205ENST00000578861 CXXC1Q9P0U4 656 aaPredicted RBP11.19□□□□□ -0.62
SNX11-205ENST00000578861 FANCIQ9NVI1 1328 aa11.18□□□□□ -0.62
SNX11-205ENST00000578861 A0A0G2JLL6 359 aaPredicted RBP11.18□□□□□ -0.62
SNX11-205ENST00000578861 ANKRD18BA2A2Z9 1011 aa11.18□□□□□ -0.62
SNX11-205ENST00000578861 TRIM75PA6NK02 468 aa11.18□□□□□ -0.62
SNX11-205ENST00000578861 MYCNP04198 464 aaPredicted RBP11.18□□□□□ -0.62
SNX11-205ENST00000578861 ZKSCAN1P17029 563 aaPredicted RBP11.18□□□□□ -0.62
SNX11-205ENST00000578861 CASP7P55210 303 aa11.18□□□□□ -0.62
SNX11-205ENST00000578861 NHLH1Q02575 133 aa11.18□□□□□ -0.62
SNX11-205ENST00000578861 TCP10Q12799 353 aa11.18□□□□□ -0.62
SNX11-205ENST00000578861 FAM110CQ1W6H9 321 aa11.18□□□□□ -0.62
SNX11-205ENST00000578861 PRRT2Q7Z6L0 340 aaPredicted RBP11.18□□□□□ -0.62
SNX11-205ENST00000578861 LINS1Q8NG48 757 aa11.18□□□□□ -0.62
SNX11-205ENST00000578861 PLA2G12BQ9BX93 195 aa11.18□□□□□ -0.62
SNX11-205ENST00000578861 IL16Q14005 1332 aa11.17□□□□□ -0.62
SNX11-205ENST00000578861 F6X3S4 739 aa11.17□□□□□ -0.62
SNX11-205ENST00000578861 CNGA1P29973 690 aa11.17□□□□□ -0.62
SNX11-205ENST00000578861 EPHB4P54760 987 aa11.17□□□□□ -0.62
SNX11-205ENST00000578861 IFIT5Q13325 482 aaKnown RBP11.17□□□□□ -0.62
SNX11-205ENST00000578861 ADGRE1Q14246 886 aa11.17□□□□□ -0.62
SNX11-205ENST00000578861 SH3RF1Q7Z6J0 888 aa11.17□□□□□ -0.62
SNX11-205ENST00000578861 FAM83AQ86UY5 434 aa11.17□□□□□ -0.62
SNX11-205ENST00000578861 KHSRPQ92945 711 aaKnown RBP eCLIP11.17□□□□□ -0.62
SNX11-205ENST00000578861 SLC45A1Q9Y2W3 748 aa11.17□□□□□ -0.62
SNX11-205ENST00000578861 TRIM43BA6NCK2 446 aa11.16□□□□□ -0.62
SNX11-205ENST00000578861 VAMP4O75379 141 aa11.16□□□□□ -0.62
SNX11-205ENST00000578861 FOXO4P98177 505 aa11.16□□□□□ -0.62
SNX11-205ENST00000578861 EXOSC9Q06265 439 aaKnown RBP11.16□□□□□ -0.62
SNX11-205ENST00000578861 GRIK5Q16478 980 aa11.16□□□□□ -0.62
SNX11-205ENST00000578861 TRIM60Q495X7 471 aa11.16□□□□□ -0.62
SNX11-205ENST00000578861 TEKT1Q969V4 418 aa11.16□□□□□ -0.62
SNX11-205ENST00000578861 TRIM43Q96BQ3 446 aaPredicted RBP11.16□□□□□ -0.62
SNX11-205ENST00000578861 NUDT12Q9BQG2 462 aa11.16□□□□□ -0.62
SNX11-205ENST00000578861 MRS2Q9HD23 443 aa11.16□□□□□ -0.62
SNX11-205ENST00000578861 ZNF112Q9UJU3 913 aa11.16□□□□□ -0.62
SNX11-205ENST00000578861 PNMA3Q9UL41 463 aa11.16□□□□□ -0.62
SNX11-205ENST00000578861 PTPRAP18433 802 aa11.15□□□□□ -0.62
SNX11-205ENST00000578861 PBX2P40425 430 aa11.15□□□□□ -0.62
SNX11-205ENST00000578861 CHAF1AQ13111 956 aaPredicted RBP11.15□□□□□ -0.62
SNX11-205ENST00000578861 CCL14Q16627 93 aa11.15□□□□□ -0.62
SNX11-205ENST00000578861 TAF7LQ5H9L4 462 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms