RNA–Protein interactions for RNA: ENST00000578780.2

RTTN-202, Transcript of rotatin, humanhuman

TSL 5 BASIC

Gene RTTN, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-202ENST00000578780 SRLQ86TD4 932 aa11.65□□□□□ -0.54
RTTN-202ENST00000578780 PACS2Q86VP3 889 aa11.65□□□□□ -0.54
RTTN-202ENST00000578780 RNF217Q8TC41 542 aa11.65□□□□□ -0.54
RTTN-202ENST00000578780 RPGRQ92834 1020 aaKnown RBP11.65□□□□□ -0.54
RTTN-202ENST00000578780 SYAP1Q96A49 352 aaPredicted RBP11.65□□□□□ -0.54
RTTN-202ENST00000578780 ALDH8A1Q9H2A2 487 aaPredicted RBP11.65□□□□□ -0.54
RTTN-202ENST00000578780 ZNF215Q9UL58 517 aaPredicted RBP11.65□□□□□ -0.54
RTTN-202ENST00000578780 FHOD1Q9Y613 1164 aa11.65□□□□□ -0.54
RTTN-202ENST00000578780 A0A1B0GUL6 1792 aa11.65□□□□□ -0.54
RTTN-202ENST00000578780 POLRMTO00411 1230 aaKnown RBP11.65□□□□□ -0.54
RTTN-202ENST00000578780 FGAP02671 866 aa11.65□□□□□ -0.54
RTTN-202ENST00000578780 KLRK1P26718 216 aa11.65□□□□□ -0.54
RTTN-202ENST00000578780 PLA2G4AP47712 749 aa11.65□□□□□ -0.54
RTTN-202ENST00000578780 FOXD4L5Q5VV16 416 aaPredicted RBP11.65□□□□□ -0.54
RTTN-202ENST00000578780 POTEAQ6S8J7 498 aa11.65□□□□□ -0.54
RTTN-202ENST00000578780 COL23A1Q86Y22 540 aaPredicted RBP11.65□□□□□ -0.54
RTTN-202ENST00000578780 FOXD4L4Q8WXT5 416 aaPredicted RBP11.65□□□□□ -0.54
RTTN-202ENST00000578780 SH2B1Q9NRF2 756 aaPredicted RBP11.65□□□□□ -0.54
RTTN-202ENST00000578780 LRP2BPQ9P2M1 347 aa11.65□□□□□ -0.54
RTTN-202ENST00000578780 TPCN1Q9ULQ1 816 aa11.65□□□□□ -0.54
RTTN-202ENST00000578780 SUFUQ9UMX1 484 aa11.65□□□□□ -0.54
RTTN-202ENST00000578780 MYH7P12883 1935 aa11.64□□□□□ -0.55
RTTN-202ENST00000578780 E7EWF7 191 aa11.64□□□□□ -0.55
RTTN-202ENST00000578780 HMGB1P09429 215 aaKnown RBP11.64□□□□□ -0.55
RTTN-202ENST00000578780 TOB2Q14106 344 aaPredicted RBP11.64□□□□□ -0.55
RTTN-202ENST00000578780 ME3Q16798 604 aa11.64□□□□□ -0.55
RTTN-202ENST00000578780 IMMTQ16891 758 aaKnown RBP11.64□□□□□ -0.55
RTTN-202ENST00000578780 FBXO33Q7Z6M2 555 aa11.64□□□□□ -0.55
RTTN-202ENST00000578780 SPC24Q8NBT2 197 aa11.64□□□□□ -0.55
RTTN-202ENST00000578780 AIDAQ96BJ3 306 aa11.64□□□□□ -0.55
RTTN-202ENST00000578780 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.64□□□□□ -0.55
RTTN-202ENST00000578780 GADD45BO75293 160 aaPredicted RBP11.64□□□□□ -0.55
RTTN-202ENST00000578780 ELF2Q15723 593 aa11.64□□□□□ -0.55
RTTN-202ENST00000578780 ZSCAN26Q16670 478 aa11.64□□□□□ -0.55
RTTN-202ENST00000578780 CRY2Q49AN0 593 aa11.64□□□□□ -0.55
RTTN-202ENST00000578780 CCDC83Q8IWF9 413 aa11.64□□□□□ -0.55
RTTN-202ENST00000578780 ANKIB1Q9P2G1 1089 aa11.64□□□□□ -0.55
RTTN-202ENST00000578780 ABCF2Q9UG63 623 aa11.64□□□□□ -0.55
RTTN-202ENST00000578780 DENND2AQ9ULE3 1009 aa11.64□□□□□ -0.55
RTTN-202ENST00000578780 HIBADHP31937 336 aaKnown RBP11.63□□□□□ -0.55
RTTN-202ENST00000578780 HAND2P61296 217 aa11.63□□□□□ -0.55
RTTN-202ENST00000578780 Q6ZUG5 572 aa11.63□□□□□ -0.55
RTTN-202ENST00000578780 DHX32Q7L7V1 743 aaKnown RBP11.63□□□□□ -0.55
RTTN-202ENST00000578780 NLGN1Q8N2Q7 840 aa11.63□□□□□ -0.55
RTTN-202ENST00000578780 SMARCE1Q969G3 411 aa11.63□□□□□ -0.55
RTTN-202ENST00000578780 SGSM3Q96HU1 749 aa11.63□□□□□ -0.55
RTTN-202ENST00000578780 STRBPQ96SI9 672 aaKnown RBP11.63□□□□□ -0.55
RTTN-202ENST00000578780 MED4Q9NPJ6 270 aa11.63□□□□□ -0.55
RTTN-202ENST00000578780 RRP15Q9Y3B9 282 aaKnown RBP11.63□□□□□ -0.55
RTTN-202ENST00000578780 MYO5AQ9Y4I1 1855 aaKnown RBP11.63□□□□□ -0.55
RTTN-202ENST00000578780 KIF1CO43896 1103 aaKnown RBP11.63□□□□□ -0.55
RTTN-202ENST00000578780 PTGS1P23219 599 aa11.63□□□□□ -0.55
RTTN-202ENST00000578780 SLC51AQ86UW1 340 aa11.63□□□□□ -0.55
RTTN-202ENST00000578780 NECAB1Q8N987 351 aa11.63□□□□□ -0.55
RTTN-202ENST00000578780 FLAD1Q8NFF5 587 aa11.63□□□□□ -0.55
RTTN-202ENST00000578780 RBM17Q96I25 401 aaKnown RBP11.63□□□□□ -0.55
RTTN-202ENST00000578780 SMC3Q9UQE7 1217 aa11.63□□□□□ -0.55
RTTN-202ENST00000578780 ZNF213O14771 459 aa11.62□□□□□ -0.55
RTTN-202ENST00000578780 SEMA3EO15041 775 aa11.62□□□□□ -0.55
RTTN-202ENST00000578780 MBD4O95243 580 aa11.62□□□□□ -0.55
RTTN-202ENST00000578780 PLCB2Q00722 1185 aa11.62□□□□□ -0.55
RTTN-202ENST00000578780 E2F4Q16254 413 aa11.62□□□□□ -0.55
RTTN-202ENST00000578780 LRRC2Q9BYS8 371 aa11.62□□□□□ -0.55
RTTN-202ENST00000578780 RAI14Q9P0K7 980 aa11.62□□□□□ -0.55
RTTN-202ENST00000578780 COL1A1P02452 1464 aaPredicted RBP11.62□□□□□ -0.55
RTTN-202ENST00000578780 ST3GAL1Q11201 340 aa11.61□□□□□ -0.55
RTTN-202ENST00000578780 TTC31Q49AM3 519 aaPredicted RBP11.61□□□□□ -0.55
RTTN-202ENST00000578780 TEX35Q5T0J7 233 aa11.61□□□□□ -0.55
RTTN-202ENST00000578780 TXNRD3Q86VQ6 643 aa11.61□□□□□ -0.55
RTTN-202ENST00000578780 GOLGA6L1Q8N7Z2 621 aa11.61□□□□□ -0.55
RTTN-202ENST00000578780 FAM212AQ96EL1 285 aa11.61□□□□□ -0.55
RTTN-202ENST00000578780 ARMT1Q9H993 441 aa11.61□□□□□ -0.55
RTTN-202ENST00000578780 LEMD3Q9Y2U8 911 aa11.61□□□□□ -0.55
RTTN-202ENST00000578780 SH3BP1Q9Y3L3 701 aa11.61□□□□□ -0.55
RTTN-202ENST00000578780 DOCK2Q92608 1830 aa11.61□□□□□ -0.55
RTTN-202ENST00000578780 BRD1O95696 1058 aa11.61□□□□□ -0.55
RTTN-202ENST00000578780 H2AFXP16104 143 aaPredicted RBP11.61□□□□□ -0.55
RTTN-202ENST00000578780 CYP7A1P22680 504 aa11.61□□□□□ -0.55
RTTN-202ENST00000578780 TDO2P48775 406 aa11.61□□□□□ -0.55
RTTN-202ENST00000578780 EXOSC10Q01780 885 aaKnown RBP11.61□□□□□ -0.55
RTTN-202ENST00000578780 LRMPQ12912 555 aa11.61□□□□□ -0.55
RTTN-202ENST00000578780 XDHP47989 1333 aa11.61□□□□□ -0.55
RTTN-202ENST00000578780 POLR3GO15318 223 aaPredicted RBP11.6□□□□□ -0.55
RTTN-202ENST00000578780 MAP2K1Q02750 393 aaPredicted RBP11.6□□□□□ -0.55
RTTN-202ENST00000578780 STK3Q13188 491 aa11.6□□□□□ -0.55
RTTN-202ENST00000578780 SWT1Q5T5J6 900 aaKnown RBP11.6□□□□□ -0.55
RTTN-202ENST00000578780 CCDC91Q7Z6B0 441 aa11.6□□□□□ -0.55
RTTN-202ENST00000578780 MIGA1Q8NAN2 632 aa11.6□□□□□ -0.55
RTTN-202ENST00000578780 FBXO18Q8NFZ0 1043 aa11.6□□□□□ -0.55
RTTN-202ENST00000578780 BRF1Q92994 677 aa11.6□□□□□ -0.55
RTTN-202ENST00000578780 DEF6Q9H4E7 631 aa11.6□□□□□ -0.55
RTTN-202ENST00000578780 PNPLA7Q6ZV29 1317 aa11.6□□□□□ -0.55
RTTN-202ENST00000578780 IRS2Q9Y4H2 1338 aa11.6□□□□□ -0.55
RTTN-202ENST00000578780 KLRG2A4D1S0 409 aaPredicted RBP11.6□□□□□ -0.55
RTTN-202ENST00000578780 DTNBO60941 627 aa11.6□□□□□ -0.55
RTTN-202ENST00000578780 BBOX1O75936 387 aa11.6□□□□□ -0.55
RTTN-202ENST00000578780 PNMA6AP0CW24 399 aaPredicted RBP11.6□□□□□ -0.55
RTTN-202ENST00000578780 GJB2P29033 226 aa11.6□□□□□ -0.55
RTTN-202ENST00000578780 HOXA10P31260 410 aaPredicted RBP11.6□□□□□ -0.55
RTTN-202ENST00000578780 GPSM2P81274 684 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms