RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 MAP3K21Q5TCX8 1036 aa14.23□□□□□ -0.13
GGA3-206ENST00000578773 LBHD1Q9BQE6 289 aaPredicted RBP14.23□□□□□ -0.13
GGA3-206ENST00000578773 PLA2G12BQ9BX93 195 aa14.23□□□□□ -0.13
GGA3-206ENST00000578773 CXCL11O14625 94 aa14.22□□□□□ -0.13
GGA3-206ENST00000578773 ATN1P54259 1190 aaPredicted RBP14.22□□□□□ -0.13
GGA3-206ENST00000578773 LMOD3Q0VAK6 560 aa14.22□□□□□ -0.13
GGA3-206ENST00000578773 LHX8Q68G74 356 aa14.22□□□□□ -0.13
GGA3-206ENST00000578773 ZFPM1Q8IX07 1006 aa14.22□□□□□ -0.13
GGA3-206ENST00000578773 SMCR8Q8TEV9 937 aaPredicted RBP14.22□□□□□ -0.13
GGA3-206ENST00000578773 FAM84BQ96KN1 310 aaPredicted RBP14.22□□□□□ -0.13
GGA3-206ENST00000578773 PCGF6Q9BYE7 350 aa14.22□□□□□ -0.13
GGA3-206ENST00000578773 ATRNL1Q5VV63 1379 aa14.22□□□□□ -0.13
GGA3-206ENST00000578773 CYP2B6P20813 491 aa14.21□□□□□ -0.13
GGA3-206ENST00000578773 NFIAQ12857 509 aa14.21□□□□□ -0.13
GGA3-206ENST00000578773 G2E3Q7L622 706 aa14.21□□□□□ -0.13
GGA3-206ENST00000578773 C8orf58Q8NAV2 365 aa14.21□□□□□ -0.13
GGA3-206ENST00000578773 UHRF1Q96T88 793 aaPredicted RBP14.21□□□□□ -0.13
GGA3-206ENST00000578773 AFG3L2Q9Y4W6 797 aa14.21□□□□□ -0.13
GGA3-206ENST00000578773 ZHX2Q9Y6X8 837 aa14.21□□□□□ -0.13
GGA3-206ENST00000578773 MYH2Q9UKX2 1941 aa14.2□□□□□ -0.14
GGA3-206ENST00000578773 ANKRD18BA2A2Z9 1011 aa14.2□□□□□ -0.14
GGA3-206ENST00000578773 SMAD3P84022 425 aaKnown RBP14.2□□□□□ -0.14
GGA3-206ENST00000578773 KSR2Q6VAB6 950 aa14.2□□□□□ -0.14
GGA3-206ENST00000578773 TEKT1Q969V4 418 aa14.2□□□□□ -0.14
GGA3-206ENST00000578773 SNX27Q96L92 541 aa14.2□□□□□ -0.14
GGA3-206ENST00000578773 ZDHHC15Q96MV8 337 aa14.2□□□□□ -0.14
GGA3-206ENST00000578773 PHF20L1A8MW92 1017 aa14.19□□□□□ -0.14
GGA3-206ENST00000578773 PTPRAP18433 802 aa14.19□□□□□ -0.14
GGA3-206ENST00000578773 HIBADHP31937 336 aaKnown RBP14.19□□□□□ -0.14
GGA3-206ENST00000578773 FOXO4P98177 505 aa14.19□□□□□ -0.14
GGA3-206ENST00000578773 CACNB2Q08289 660 aaPredicted RBP14.19□□□□□ -0.14
GGA3-206ENST00000578773 GCKRQ14397 625 aa14.19□□□□□ -0.14
GGA3-206ENST00000578773 CCL14Q16627 93 aa14.19□□□□□ -0.14
GGA3-206ENST00000578773 FAM110CQ1W6H9 321 aa14.19□□□□□ -0.14
GGA3-206ENST00000578773 EPHA10Q5JZY3 1008 aa14.19□□□□□ -0.14
GGA3-206ENST00000578773 POTEEQ6S8J3 1075 aa14.19□□□□□ -0.14
GGA3-206ENST00000578773 ALYREFQ86V81 257 aaKnown RBP14.19□□□□□ -0.14
GGA3-206ENST00000578773 ASB2Q96Q27 587 aa14.19□□□□□ -0.14
GGA3-206ENST00000578773 SENP6Q9GZR1 1112 aaPredicted RBP14.19□□□□□ -0.14
GGA3-206ENST00000578773 PNNQ9H307 717 aaKnown RBP14.19□□□□□ -0.14
GGA3-206ENST00000578773 TMOD2Q9NZR1 351 aa14.19□□□□□ -0.14
GGA3-206ENST00000578773 CLSPNQ9HAW4 1339 aa14.18□□□□□ -0.14
GGA3-206ENST00000578773 TRIM75PA6NK02 468 aa14.18□□□□□ -0.14
GGA3-206ENST00000578773 DDX58O95786 925 aaKnown RBP14.18□□□□□ -0.14
GGA3-206ENST00000578773 EPHB4P54760 987 aa14.18□□□□□ -0.14
GGA3-206ENST00000578773 RTP1P59025 263 aa14.18□□□□□ -0.14
GGA3-206ENST00000578773 FKBP1CQ5VVH2 108 aa14.18□□□□□ -0.14
GGA3-206ENST00000578773 FASTKD5Q7L8L6 764 aaKnown RBP14.18□□□□□ -0.14
GGA3-206ENST00000578773 FAM151AQ8WW52 585 aa14.18□□□□□ -0.14
GGA3-206ENST00000578773 BADQ92934 168 aa14.18□□□□□ -0.14
GGA3-206ENST00000578773 FAM198AQ9UFP1 575 aa14.18□□□□□ -0.14
GGA3-206ENST00000578773 SLC45A1Q9Y2W3 748 aa14.18□□□□□ -0.14
GGA3-206ENST00000578773 CHMP3Q9Y3E7 222 aa14.18□□□□□ -0.14
GGA3-206ENST00000578773 DAGLAQ9Y4D2 1042 aa14.18□□□□□ -0.14
GGA3-206ENST00000578773 ZNF853P0CG23 659 aa14.17□□□□□ -0.14
GGA3-206ENST00000578773 SH3RF1Q7Z6J0 888 aa14.17□□□□□ -0.14
GGA3-206ENST00000578773 SCYL3Q8IZE3 742 aa14.17□□□□□ -0.14
GGA3-206ENST00000578773 TSPYL6Q8N831 410 aa14.17□□□□□ -0.14
GGA3-206ENST00000578773 HOOK2Q96ED9 719 aa14.17□□□□□ -0.14
GGA3-206ENST00000578773 LRFN3Q9BTN0 628 aa14.17□□□□□ -0.14
GGA3-206ENST00000578773 PUS3Q9BZE2 481 aaKnown RBP14.17□□□□□ -0.14
GGA3-206ENST00000578773 HDLBPQ00341 1268 aaKnown RBP14.16□□□□□ -0.14
GGA3-206ENST00000578773 EPHX3Q9H6B9 360 aa14.16□□□□□ -0.14
GGA3-206ENST00000578773 THEGQ9P2T0 379 aa14.16□□□□□ -0.14
GGA3-206ENST00000578773 AGTPBP1Q9UPW5 1226 aa14.16□□□□□ -0.14
GGA3-206ENST00000578773 ATP11BQ9Y2G3 1177 aa14.16□□□□□ -0.14
GGA3-206ENST00000578773 WDFY4Q6ZS81 3184 aa14.16□□□□□ -0.14
GGA3-206ENST00000578773 IFIT5Q13325 482 aaKnown RBP14.15□□□□□ -0.14
GGA3-206ENST00000578773 PDE3AQ14432 1141 aa14.15□□□□□ -0.14
GGA3-206ENST00000578773 CCDC85BQ15834 202 aaPredicted RBP14.15□□□□□ -0.14
GGA3-206ENST00000578773 CDC42EP5Q6NZY7 148 aa14.15□□□□□ -0.14
GGA3-206ENST00000578773 ATXN2LQ8WWM7 1075 aaKnown RBP14.15□□□□□ -0.14
GGA3-206ENST00000578773 PRDM5Q9NQX1 630 aaPredicted RBP14.15□□□□□ -0.14
GGA3-206ENST00000578773 ITGB8P26012 769 aa14.14□□□□□ -0.15
GGA3-206ENST00000578773 NEXNQ0ZGT2 675 aa14.14□□□□□ -0.15
GGA3-206ENST00000578773 DIXDC1Q155Q3 683 aa14.14□□□□□ -0.15
GGA3-206ENST00000578773 SH3BP5LQ7L8J4 393 aa14.14□□□□□ -0.15
GGA3-206ENST00000578773 LRRC37A2A6NM11 1700 aa14.13□□□□□ -0.15
GGA3-206ENST00000578773 TRIM43BA6NCK2 446 aa14.13□□□□□ -0.15
GGA3-206ENST00000578773 DNAJB2P25686 324 aa14.13□□□□□ -0.15
GGA3-206ENST00000578773 LDHAL6AQ6ZMR3 332 aa14.13□□□□□ -0.15
GGA3-206ENST00000578773 FBXO33Q7Z6M2 555 aa14.13□□□□□ -0.15
GGA3-206ENST00000578773 TRIM43Q96BQ3 446 aaPredicted RBP14.13□□□□□ -0.15
GGA3-206ENST00000578773 CNNM1Q9NRU3 951 aa14.13□□□□□ -0.15
GGA3-206ENST00000578773 TRANK1O15050 2925 aa14.13□□□□□ -0.15
GGA3-206ENST00000578773 SIPA1L1O43166 1804 aa14.13□□□□□ -0.15
GGA3-206ENST00000578773 FAM86C2PA6NEL3 165 aa14.12□□□□□ -0.15
GGA3-206ENST00000578773 UBE4AQ14139 1066 aa14.12□□□□□ -0.15
GGA3-206ENST00000578773 ADGRE1Q14246 886 aa14.12□□□□□ -0.15
GGA3-206ENST00000578773 LMBR1LQ6UX01 489 aa14.12□□□□□ -0.15
GGA3-206ENST00000578773 KHSRPQ92945 711 aaKnown RBP eCLIP14.12□□□□□ -0.15
GGA3-206ENST00000578773 TXNRD2Q9NNW7 524 aa14.12□□□□□ -0.15
GGA3-206ENST00000578773 C11orf16Q9NQ32 467 aa14.12□□□□□ -0.15
GGA3-206ENST00000578773 PDLIM7Q9NR12 457 aa14.12□□□□□ -0.15
GGA3-206ENST00000578773 PICK1Q9NRD5 415 aa14.12□□□□□ -0.15
GGA3-206ENST00000578773 FLRT1Q9NZU1 646 aa14.12□□□□□ -0.15
GGA3-206ENST00000578773 CACNA1FO60840 1977 aa14.11□□□□□ -0.15
GGA3-206ENST00000578773 FAM196BA6NMK8 535 aa14.11□□□□□ -0.15
GGA3-206ENST00000578773 ZKSCAN1P17029 563 aaPredicted RBP14.11□□□□□ -0.15
GGA3-206ENST00000578773 MRPS5P82675 430 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms