RNA–Protein interactions for RNA: ENST00000578348.5

GGA3-205, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-205ENST00000578348 NDUFA8P51970 172 aa13.24□□□□□ -0.29
GGA3-205ENST00000578348 ANTXR2P58335 489 aa13.24□□□□□ -0.29
GGA3-205ENST00000578348 RBM6P78332 1123 aaKnown RBP13.24□□□□□ -0.29
GGA3-205ENST00000578348 ADALQ6DHV7 355 aa13.24□□□□□ -0.29
GGA3-205ENST00000578348 RAB11FIP4Q86YS3 637 aa13.24□□□□□ -0.29
GGA3-205ENST00000578348 NBPF3Q9H094 633 aa13.24□□□□□ -0.29
GGA3-205ENST00000578348 NAT10Q9H0A0 1025 aaKnown RBP13.24□□□□□ -0.29
GGA3-205ENST00000578348 GNL3LQ9NVN8 582 aaKnown RBP13.24□□□□□ -0.29
GGA3-205ENST00000578348 RTEL1Q9NZ71 1219 aa13.24□□□□□ -0.29
GGA3-205ENST00000578348 CLIC4Q9Y696 253 aa13.24□□□□□ -0.29
GGA3-205ENST00000578348 PNPLA7Q6ZV29 1317 aa13.24□□□□□ -0.29
GGA3-205ENST00000578348 MBD4O95243 580 aa13.24□□□□□ -0.29
GGA3-205ENST00000578348 GNAT2P19087 354 aa13.24□□□□□ -0.29
GGA3-205ENST00000578348 DMTNQ08495 405 aa13.24□□□□□ -0.29
GGA3-205ENST00000578348 STK38Q15208 465 aa13.24□□□□□ -0.29
GGA3-205ENST00000578348 NBPF5PQ86XG9 351 aaPredicted RBP13.24□□□□□ -0.29
GGA3-205ENST00000578348 TBC1D10CQ8IV04 446 aa13.24□□□□□ -0.29
GGA3-205ENST00000578348 C8orf76Q96K31 380 aa13.24□□□□□ -0.29
GGA3-205ENST00000578348 TRMT1Q9NXH9 659 aaKnown RBP13.24□□□□□ -0.29
GGA3-205ENST00000578348 AFF2P51816 1311 aa13.23□□□□□ -0.29
GGA3-205ENST00000578348 ONECUT3O60422 494 aaPredicted RBP13.23□□□□□ -0.29
GGA3-205ENST00000578348 CCZ1BP86790 482 aa13.23□□□□□ -0.29
GGA3-205ENST00000578348 CCZ1P86791 482 aaPredicted RBP13.23□□□□□ -0.29
GGA3-205ENST00000578348 PTPN14Q15678 1187 aa13.23□□□□□ -0.29
GGA3-205ENST00000578348 ZRSR1Q15695 479 aaKnown RBP13.23□□□□□ -0.29
GGA3-205ENST00000578348 LINC00301Q8NCQ3 95 aa13.23□□□□□ -0.29
GGA3-205ENST00000578348 NLRP3Q96P20 1036 aa13.23□□□□□ -0.29
GGA3-205ENST00000578348 GJB4Q9NTQ9 266 aa13.23□□□□□ -0.29
GGA3-205ENST00000578348 TAF1P21675 1872 aa13.23□□□□□ -0.29
GGA3-205ENST00000578348 KLF18A0A0U1RQI7 1052 aa13.23□□□□□ -0.29
GGA3-205ENST00000578348 GOLGA8BA8MQT2 603 aa13.23□□□□□ -0.29
GGA3-205ENST00000578348 DHX16O60231 1041 aaKnown RBP13.23□□□□□ -0.29
GGA3-205ENST00000578348 DPCR1Q3MIW9 517 aa13.23□□□□□ -0.29
GGA3-205ENST00000578348 SMIM5Q71RC9 77 aa13.23□□□□□ -0.29
GGA3-205ENST00000578348 MINPP1Q9UNW1 487 aa13.23□□□□□ -0.29
GGA3-205ENST00000578348 CHD4Q14839 1912 aa13.23□□□□□ -0.29
GGA3-205ENST00000578348 SYCP1Q15431 976 aa13.22□□□□□ -0.29
GGA3-205ENST00000578348 CAVIN4Q5BKX8 364 aa13.22□□□□□ -0.29
GGA3-205ENST00000578348 TPTE2Q6XPS3 522 aa13.22□□□□□ -0.29
GGA3-205ENST00000578348 IFNL3Q8IZI9 196 aa13.22□□□□□ -0.29
GGA3-205ENST00000578348 ARHGEF1Q92888 912 aaKnown RBP13.22□□□□□ -0.29
GGA3-205ENST00000578348 NAPBQ9H115 298 aa13.22□□□□□ -0.29
GGA3-205ENST00000578348 EPB41L4AQ9HCS5 686 aaPredicted RBP13.22□□□□□ -0.29
GGA3-205ENST00000578348 LRP2BPQ9P2M1 347 aa13.22□□□□□ -0.29
GGA3-205ENST00000578348 A0A1W2PQ27 194 aa13.22□□□□□ -0.29
GGA3-205ENST00000578348 A0A1W2PQ64 194 aa13.22□□□□□ -0.29
GGA3-205ENST00000578348 A0A1W2PQD8 194 aa13.22□□□□□ -0.29
GGA3-205ENST00000578348 CPLX1O14810 134 aa13.22□□□□□ -0.29
GGA3-205ENST00000578348 FAM182BQ5T319 152 aa13.22□□□□□ -0.29
GGA3-205ENST00000578348 CERKQ8TCT0 537 aa13.22□□□□□ -0.29
GGA3-205ENST00000578348 KCNG4Q8TDN1 519 aa13.22□□□□□ -0.29
GGA3-205ENST00000578348 CELF1Q92879 486 aaKnown RBP13.22□□□□□ -0.29
GGA3-205ENST00000578348 ARMT1Q9H993 441 aa13.22□□□□□ -0.29
GGA3-205ENST00000578348 KIAA1468Q9P260 1216 aa13.22□□□□□ -0.29
GGA3-205ENST00000578348 ORC3Q9UBD5 711 aaPredicted RBP13.22□□□□□ -0.29
GGA3-205ENST00000578348 TRPC5Q9UL62 973 aaPredicted RBP13.22□□□□□ -0.29
GGA3-205ENST00000578348 BIN1O00499 593 aa13.21□□□□□ -0.29
GGA3-205ENST00000578348 SEMA3EO15041 775 aa13.21□□□□□ -0.29
GGA3-205ENST00000578348 SPTLC2O15270 562 aa13.21□□□□□ -0.29
GGA3-205ENST00000578348 RPS8P62241 208 aaKnown RBP13.21□□□□□ -0.29
GGA3-205ENST00000578348 NYAP1Q6ZVC0 841 aa13.21□□□□□ -0.29
GGA3-205ENST00000578348 NBPF11Q86T75 865 aa13.21□□□□□ -0.29
GGA3-205ENST00000578348 FBXO18Q8NFZ0 1043 aa13.21□□□□□ -0.29
GGA3-205ENST00000578348 TMEM87BQ96K49 555 aa13.21□□□□□ -0.29
GGA3-205ENST00000578348 NACAP1Q9BZK3 213 aa13.21□□□□□ -0.29
GGA3-205ENST00000578348 ANKRD2Q9GZV1 360 aa13.21□□□□□ -0.29
GGA3-205ENST00000578348 ZHX1Q9UKY1 873 aaPredicted RBP13.21□□□□□ -0.29
GGA3-205ENST00000578348 TAOK2Q9UL54 1235 aa13.21□□□□□ -0.29
GGA3-205ENST00000578348 ANGEL1Q9UNK9 670 aaKnown RBP13.21□□□□□ -0.29
GGA3-205ENST00000578348 HPS5Q9UPZ3 1129 aa13.21□□□□□ -0.29
GGA3-205ENST00000578348 COL1A1P02452 1464 aaPredicted RBP13.21□□□□□ -0.3
GGA3-205ENST00000578348 GSG1L2A8MUP6 293 aa13.2□□□□□ -0.3
GGA3-205ENST00000578348 SH2B2O14492 632 aaPredicted RBP13.2□□□□□ -0.3
GGA3-205ENST00000578348 SMC2O95347 1197 aa13.2□□□□□ -0.3
GGA3-205ENST00000578348 GYG1P46976 350 aa13.2□□□□□ -0.3
GGA3-205ENST00000578348 MYSM1Q5VVJ2 828 aa13.2□□□□□ -0.3
GGA3-205ENST00000578348 CYB5R4Q7L1T6 521 aa13.2□□□□□ -0.3
GGA3-205ENST00000578348 CNNM2Q9H8M5 875 aa13.2□□□□□ -0.3
GGA3-205ENST00000578348 POLR3EQ9NVU0 708 aa13.2□□□□□ -0.3
GGA3-205ENST00000578348 DENND2AQ9ULE3 1009 aa13.2□□□□□ -0.3
GGA3-205ENST00000578348 TNRC6CQ9HCJ0 1690 aaKnown RBP13.2□□□□□ -0.3
GGA3-205ENST00000578348 KIF28PB7ZC32 967 aa13.2□□□□□ -0.3
GGA3-205ENST00000578348 YEATS4O95619 227 aa13.2□□□□□ -0.3
GGA3-205ENST00000578348 SYNE3Q6ZMZ3 975 aa13.2□□□□□ -0.3
GGA3-205ENST00000578348 CCAR2Q8N163 923 aaKnown RBP13.2□□□□□ -0.3
GGA3-205ENST00000578348 LCORLQ8N3X6 602 aa13.2□□□□□ -0.3
GGA3-205ENST00000578348 CGNQ9P2M7 1197 aaKnown RBP13.2□□□□□ -0.3
GGA3-205ENST00000578348 NEDD4P46934 1319 aa13.2□□□□□ -0.3
GGA3-205ENST00000578348 PDS5AQ29RF7 1337 aaKnown RBP13.2□□□□□ -0.3
GGA3-205ENST00000578348 CYP7A1P22680 504 aa13.19□□□□□ -0.3
GGA3-205ENST00000578348 RFC4P35249 363 aa13.19□□□□□ -0.3
GGA3-205ENST00000578348 GSDMDP57764 484 aa13.19□□□□□ -0.3
GGA3-205ENST00000578348 TRAPPC3LQ5T215 181 aa13.19□□□□□ -0.3
GGA3-205ENST00000578348 VPS37DQ86XT2 251 aa13.19□□□□□ -0.3
GGA3-205ENST00000578348 SEPT12Q8IYM1 358 aa13.19□□□□□ -0.3
GGA3-205ENST00000578348 RGS22Q8NE09 1264 aa13.19□□□□□ -0.3
GGA3-205ENST00000578348 FEZ1Q99689 392 aa13.19□□□□□ -0.3
GGA3-205ENST00000578348 XPO4Q9C0E2 1151 aaKnown RBP13.19□□□□□ -0.3
GGA3-205ENST00000578348 IFNKQ9P0W0 207 aa13.19□□□□□ -0.3
GGA3-205ENST00000578348 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.19□□□□□ -0.39e-6■■□□□ 14.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms