RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 GSX1Q9H4S2 264 aaPredicted RBP3.66□□□□□ -1.82
PTP4A1-204ENST00000578299 IGSF5Q9NSI5 407 aa3.66□□□□□ -1.82
PTP4A1-204ENST00000578299 CRIM1Q9NZV1 1036 aa3.66□□□□□ -1.82
PTP4A1-204ENST00000578299 DDX41Q9UJV9 622 aaKnown RBP3.66□□□□□ -1.82
PTP4A1-204ENST00000578299 PPP1R9AQ9ULJ8 1098 aa3.66□□□□□ -1.82
PTP4A1-204ENST00000578299 HIF3AQ9Y2N7 669 aa3.66□□□□□ -1.82
PTP4A1-204ENST00000578299 SUPT16HQ9Y5B9 1047 aaKnown RBP3.66□□□□□ -1.82
PTP4A1-204ENST00000578299 PCDHGC5Q9Y5F6 944 aa3.66□□□□□ -1.82
PTP4A1-204ENST00000578299 SNCAIPQ9Y6H5 919 aa3.66□□□□□ -1.82
PTP4A1-204ENST00000578299 ROBO2Q9HCK4 1378 aa3.65□□□□□ -1.82
PTP4A1-204ENST00000578299 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.65□□□□□ -1.83
PTP4A1-204ENST00000578299 DHX15O43143 795 aaKnown RBP3.65□□□□□ -1.83
PTP4A1-204ENST00000578299 CILPO75339 1184 aa3.65□□□□□ -1.83
PTP4A1-204ENST00000578299 BPNT1O95861 308 aa3.65□□□□□ -1.83
PTP4A1-204ENST00000578299 GARTP22102 1010 aa3.65□□□□□ -1.83
PTP4A1-204ENST00000578299 ASPAP45381 313 aa3.65□□□□□ -1.83
PTP4A1-204ENST00000578299 RPL6Q02878 288 aaKnown RBP3.65□□□□□ -1.83
PTP4A1-204ENST00000578299 FAM160A1Q05DH4 1040 aa3.65□□□□□ -1.83
PTP4A1-204ENST00000578299 C9orf131Q5VYM1 1079 aa3.65□□□□□ -1.83
PTP4A1-204ENST00000578299 GPAT2Q6NUI2 795 aa3.65□□□□□ -1.83
PTP4A1-204ENST00000578299 FBXL19Q6PCT2 694 aa3.65□□□□□ -1.83
PTP4A1-204ENST00000578299 LRFN4Q6PJG9 635 aa3.65□□□□□ -1.83
PTP4A1-204ENST00000578299 BNC2Q6ZN30 1099 aaPredicted RBP3.65□□□□□ -1.83
PTP4A1-204ENST00000578299 KIAA0825Q8IV33 1275 aa3.65□□□□□ -1.83
PTP4A1-204ENST00000578299 ARMC10Q8N2F6 343 aa3.65□□□□□ -1.83
PTP4A1-204ENST00000578299 GOLM1Q8NBJ4 401 aa3.65□□□□□ -1.83
PTP4A1-204ENST00000578299 ZNF296Q8WUU4 475 aaPredicted RBP3.65□□□□□ -1.83
PTP4A1-204ENST00000578299 GATAD2BQ8WXI9 593 aa3.65□□□□□ -1.83
PTP4A1-204ENST00000578299 JARID2Q92833 1246 aaPredicted RBP3.65□□□□□ -1.83
PTP4A1-204ENST00000578299 TP53INP1Q96A56 240 aa3.65□□□□□ -1.83
PTP4A1-204ENST00000578299 ELMO3Q96BJ8 720 aa3.65□□□□□ -1.83
PTP4A1-204ENST00000578299 PLPPR2Q96GM1 343 aa3.65□□□□□ -1.83
PTP4A1-204ENST00000578299 FANCD2OSQ96PS1 177 aa3.65□□□□□ -1.83
PTP4A1-204ENST00000578299 PIDD1Q9HB75 910 aa3.65□□□□□ -1.83
PTP4A1-204ENST00000578299 DISC1Q9NRI5 854 aa3.65□□□□□ -1.83
PTP4A1-204ENST00000578299 TPSG1Q9NRR2 321 aa3.65□□□□□ -1.83
PTP4A1-204ENST00000578299 ADAMTS1Q9UHI8 967 aa3.65□□□□□ -1.83
PTP4A1-204ENST00000578299 ACTL7BQ9Y614 415 aa3.65□□□□□ -1.83
PTP4A1-204ENST00000578299 TACC3Q9Y6A5 838 aa3.65□□□□□ -1.83
PTP4A1-204ENST00000578299 FAM221AA4D161 298 aa3.64□□□□□ -1.83
PTP4A1-204ENST00000578299 DCDC2CA8MYV0 355 aa3.64□□□□□ -1.83
PTP4A1-204ENST00000578299 GFRA2O00451 464 aa3.64□□□□□ -1.83
PTP4A1-204ENST00000578299 FANCGO15287 622 aa3.64□□□□□ -1.83
PTP4A1-204ENST00000578299 GREM1O60565 184 aa3.64□□□□□ -1.83
PTP4A1-204ENST00000578299 F13A1P00488 732 aa3.64□□□□□ -1.83
PTP4A1-204ENST00000578299 PROCP04070 461 aa3.64□□□□□ -1.83
PTP4A1-204ENST00000578299 BMP3P12645 472 aa3.64□□□□□ -1.83
PTP4A1-204ENST00000578299 ERCC5P28715 1186 aaPredicted RBP3.64□□□□□ -1.83
PTP4A1-204ENST00000578299 RACK1P63244 317 aaKnown RBP3.64□□□□□ -1.83
PTP4A1-204ENST00000578299 RING1Q06587 406 aa3.64□□□□□ -1.83
PTP4A1-204ENST00000578299 RAD51AP2Q09MP3 1159 aa3.64□□□□□ -1.83
PTP4A1-204ENST00000578299 MPP2Q14168 576 aa3.64□□□□□ -1.83
PTP4A1-204ENST00000578299 SGO2Q562F6 1265 aa3.64□□□□□ -1.83
PTP4A1-204ENST00000578299 WIPI1Q5MNZ9 446 aaPredicted RBP3.64□□□□□ -1.83
PTP4A1-204ENST00000578299 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.64□□□□□ -1.83
PTP4A1-204ENST00000578299 FAM196AQ6ZSG2 479 aa3.64□□□□□ -1.83
PTP4A1-204ENST00000578299 CYFIP1Q7L576 1253 aa3.64□□□□□ -1.83
PTP4A1-204ENST00000578299 FAM20CQ8IXL6 584 aa3.64□□□□□ -1.83
PTP4A1-204ENST00000578299 RNF214Q8ND24 703 aa3.64□□□□□ -1.83
PTP4A1-204ENST00000578299 SPON2Q9BUD6 331 aa3.64□□□□□ -1.83
PTP4A1-204ENST00000578299 NT5C1AQ9BXI3 368 aa3.64□□□□□ -1.83
PTP4A1-204ENST00000578299 LRRC3Q9BY71 257 aa3.64□□□□□ -1.83
PTP4A1-204ENST00000578299 CCSER2Q9H7U1 834 aa3.64□□□□□ -1.83
PTP4A1-204ENST00000578299 PICK1Q9NRD5 415 aa3.64□□□□□ -1.83
PTP4A1-204ENST00000578299 FAM105AQ9NUU6 356 aa3.64□□□□□ -1.83
PTP4A1-204ENST00000578299 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.64□□□□□ -1.83
PTP4A1-204ENST00000578299 PCDHGB7Q9Y5F8 929 aa3.64□□□□□ -1.83
PTP4A1-204ENST00000578299 H2AFB1P0C5Y9 115 aa3.63□□□□□ -1.83
PTP4A1-204ENST00000578299 H2AFB2P0C5Z0 115 aa3.63□□□□□ -1.83
PTP4A1-204ENST00000578299 MAP4P27816 1152 aaKnown RBP3.63□□□□□ -1.83
PTP4A1-204ENST00000578299 RXRBP28702 533 aa3.63□□□□□ -1.83
PTP4A1-204ENST00000578299 CDK8P49336 464 aa3.63□□□□□ -1.83
PTP4A1-204ENST00000578299 PDE4BQ07343 736 aa3.63□□□□□ -1.83
PTP4A1-204ENST00000578299 DOC2BQ14184 412 aa3.63□□□□□ -1.83
PTP4A1-204ENST00000578299 MAP7Q14244 749 aa3.63□□□□□ -1.83
PTP4A1-204ENST00000578299 INPP5AQ14642 412 aa3.63□□□□□ -1.83
PTP4A1-204ENST00000578299 TTLL4Q14679 1199 aa3.63□□□□□ -1.83
PTP4A1-204ENST00000578299 CWF19L2Q2TBE0 894 aaKnown RBP3.63□□□□□ -1.83
PTP4A1-204ENST00000578299 PPM1JQ5JR12 505 aa3.63□□□□□ -1.83
PTP4A1-204ENST00000578299 ZBTB37Q5TC79 503 aa3.63□□□□□ -1.83
PTP4A1-204ENST00000578299 CDPF1Q6NVV7 123 aa3.63□□□□□ -1.83
PTP4A1-204ENST00000578299 PRR23CQ6ZRP0 262 aa3.63□□□□□ -1.83
PTP4A1-204ENST00000578299 C12orf40Q86WS4 652 aa3.63□□□□□ -1.83
PTP4A1-204ENST00000578299 CLEC10AQ8IUN9 316 aa3.63□□□□□ -1.83
PTP4A1-204ENST00000578299 SMYD4Q8IYR2 804 aaPredicted RBP3.63□□□□□ -1.83
PTP4A1-204ENST00000578299 KCT2Q8NC54 265 aa3.63□□□□□ -1.83
PTP4A1-204ENST00000578299 ZNF507Q8TCN5 953 aa3.63□□□□□ -1.83
PTP4A1-204ENST00000578299 FBLIM1Q8WUP2 373 aa3.63□□□□□ -1.83
PTP4A1-204ENST00000578299 EZH1Q92800 747 aaPredicted RBP3.63□□□□□ -1.83
PTP4A1-204ENST00000578299 SPATA32Q96LK8 384 aa3.63□□□□□ -1.83
PTP4A1-204ENST00000578299 FAM83CQ9BQN1 747 aa3.63□□□□□ -1.83
PTP4A1-204ENST00000578299 KCNF1Q9H3M0 494 aa3.63□□□□□ -1.83
PTP4A1-204ENST00000578299 ACSS3Q9H6R3 686 aa3.63□□□□□ -1.83
PTP4A1-204ENST00000578299 STOML1Q9UBI4 398 aa3.63□□□□□ -1.83
PTP4A1-204ENST00000578299 RAXQ9Y2V3 346 aa3.63□□□□□ -1.83
PTP4A1-204ENST00000578299 CSADQ9Y600 493 aa3.63□□□□□ -1.83
PTP4A1-204ENST00000578299 FAM95CA0A1B0GW59 222 aa3.62□□□□□ -1.83
PTP4A1-204ENST00000578299 PRAMEF27A3QJZ7 478 aa3.62□□□□□ -1.83
PTP4A1-204ENST00000578299 RNGTTO60942 597 aaKnown RBP3.62□□□□□ -1.83
PTP4A1-204ENST00000578299 NEFMP07197 916 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms