RNA–Protein interactions for RNA: ENST00000578294.1

NUP85-207, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-207ENST00000578294 TEX11Q8IYF3 940 aa15.8■□□□□ 0.12
NUP85-207ENST00000578294 TNS4Q8IZW8 715 aa15.8■□□□□ 0.12
NUP85-207ENST00000578294 ELP3Q9H9T3 547 aa15.8■□□□□ 0.12
NUP85-207ENST00000578294 ZNF112Q9UJU3 913 aa15.8■□□□□ 0.12
NUP85-207ENST00000578294 ATRNL1Q5VV63 1379 aa15.79■□□□□ 0.12
NUP85-207ENST00000578294 SPDYE5A6NIY4 337 aa15.79■□□□□ 0.12
NUP85-207ENST00000578294 ATP5JP18859 108 aa15.79■□□□□ 0.12
NUP85-207ENST00000578294 MIGA2Q7L4E1 593 aa15.79■□□□□ 0.12
NUP85-207ENST00000578294 ERO1BQ86YB8 467 aa15.79■□□□□ 0.12
NUP85-207ENST00000578294 CFHR5Q9BXR6 569 aa15.79■□□□□ 0.12
NUP85-207ENST00000578294 CYP7A1P22680 504 aa15.78■□□□□ 0.12
NUP85-207ENST00000578294 GTF2A2P52657 109 aa15.78■□□□□ 0.12
NUP85-207ENST00000578294 MAP3K10Q02779 954 aa15.78■□□□□ 0.12
NUP85-207ENST00000578294 NOM1Q5C9Z4 860 aaKnown RBP15.78■□□□□ 0.12
NUP85-207ENST00000578294 ZFPM1Q8IX07 1006 aa15.78■□□□□ 0.12
NUP85-207ENST00000578294 GPATCH3Q96I76 525 aa15.78■□□□□ 0.12
NUP85-207ENST00000578294 CRBNQ96SW2 442 aa15.78■□□□□ 0.12
NUP85-207ENST00000578294 OSBPL5Q9H0X9 879 aaPredicted RBP15.78■□□□□ 0.12
NUP85-207ENST00000578294 DHX36Q9H2U1 1008 aaKnown RBP15.78■□□□□ 0.12
NUP85-207ENST00000578294 DDX4Q9NQI0 724 aaKnown RBP15.78■□□□□ 0.12
NUP85-207ENST00000578294 AATFQ9NY61 560 aaKnown RBP eCLIP15.78■□□□□ 0.12
NUP85-207ENST00000578294 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.78■□□□□ 0.12
NUP85-207ENST00000578294 TSKSQ9UJT2 592 aa15.78■□□□□ 0.12
NUP85-207ENST00000578294 OTOFQ9HC10 1997 aa15.78■□□□□ 0.12
NUP85-207ENST00000578294 LAMB1P07942 1786 aa15.77■□□□□ 0.12
NUP85-207ENST00000578294 TESPA1A2RU30 521 aaPredicted RBP15.77■□□□□ 0.12
NUP85-207ENST00000578294 TBC1D12O60347 775 aa15.77■□□□□ 0.12
NUP85-207ENST00000578294 PPATQ06203 517 aa15.77■□□□□ 0.12
NUP85-207ENST00000578294 NOL9Q5SY16 702 aaKnown RBP15.77■□□□□ 0.12
NUP85-207ENST00000578294 MAGEB6Q8N7X4 407 aa15.77■□□□□ 0.12
NUP85-207ENST00000578294 SH3RF3Q8TEJ3 882 aaPredicted RBP15.77■□□□□ 0.12
NUP85-207ENST00000578294 ZKSCAN4Q969J2 545 aaPredicted RBP15.77■□□□□ 0.12
NUP85-207ENST00000578294 DNAJC2Q99543 621 aaKnown RBP15.77■□□□□ 0.12
NUP85-207ENST00000578294 ANTXR1Q9H6X2 564 aa15.77■□□□□ 0.12
NUP85-207ENST00000578294 PCDHB15Q9Y5E8 787 aa15.77■□□□□ 0.12
NUP85-207ENST00000578294 SNCAIPQ9Y6H5 919 aa15.77■□□□□ 0.12
NUP85-207ENST00000578294 DOCK2Q92608 1830 aa15.76■□□□□ 0.11
NUP85-207ENST00000578294 DDTLA6NHG4 134 aaPredicted RBP15.76■□□□□ 0.11
NUP85-207ENST00000578294 GJA5P36382 358 aa15.76■□□□□ 0.11
NUP85-207ENST00000578294 PPIL2Q13356 520 aa15.76■□□□□ 0.11
NUP85-207ENST00000578294 IFFO2Q5TF58 517 aa15.76■□□□□ 0.11
NUP85-207ENST00000578294 SH3BP5LQ7L8J4 393 aa15.76■□□□□ 0.11
NUP85-207ENST00000578294 IFNL1Q8IU54 200 aa15.76■□□□□ 0.11
NUP85-207ENST00000578294 OTUD5Q96G74 571 aa15.76■□□□□ 0.11
NUP85-207ENST00000578294 HAUS7Q99871 368 aa15.76■□□□□ 0.11
NUP85-207ENST00000578294 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.76■□□□□ 0.11
NUP85-207ENST00000578294 BCL11AQ9H165 835 aa15.76■□□□□ 0.11
NUP85-207ENST00000578294 ECHDC1Q9NTX5 307 aa15.76■□□□□ 0.11
NUP85-207ENST00000578294 PAG1Q9NWQ8 432 aa15.76■□□□□ 0.11
NUP85-207ENST00000578294 ZBTB47Q9UFB7 747 aaPredicted RBP15.76■□□□□ 0.11
NUP85-207ENST00000578294 GOLIM4O00461 696 aa15.75■□□□□ 0.11
NUP85-207ENST00000578294 SLC9C2Q5TAH2 1124 aa15.75■□□□□ 0.11
NUP85-207ENST00000578294 ADGRA1Q86SQ6 560 aa15.75■□□□□ 0.11
NUP85-207ENST00000578294 PI4KBQ9UBF8 816 aa15.75■□□□□ 0.11
NUP85-207ENST00000578294 HERC5Q9UII4 1024 aaKnown RBP15.75■□□□□ 0.11
NUP85-207ENST00000578294 NDUFB9Q9Y6M9 179 aa15.75■□□□□ 0.11
NUP85-207ENST00000578294 SMARCA5O60264 1052 aaPredicted RBP15.74■□□□□ 0.11
NUP85-207ENST00000578294 CTNND1O60716 968 aaKnown RBP15.74■□□□□ 0.11
NUP85-207ENST00000578294 CETPP11597 493 aa15.74■□□□□ 0.11
NUP85-207ENST00000578294 INPP5BP32019 993 aa15.74■□□□□ 0.11
NUP85-207ENST00000578294 SNAPC2Q13487 334 aa15.74■□□□□ 0.11
NUP85-207ENST00000578294 HDAC1Q13547 482 aaPredicted RBP15.74■□□□□ 0.11
NUP85-207ENST00000578294 ZSCAN25Q6NSZ9 544 aa15.74■□□□□ 0.11
NUP85-207ENST00000578294 SCYL3Q8IZE3 742 aa15.74■□□□□ 0.11
NUP85-207ENST00000578294 TGFBRAP1Q8WUH2 860 aa15.74■□□□□ 0.11
NUP85-207ENST00000578294 GCC1Q96CN9 775 aa15.74■□□□□ 0.11
NUP85-207ENST00000578294 MS4A4AQ96JQ5 239 aa15.74■□□□□ 0.11
NUP85-207ENST00000578294 BOLA2Q9H3K6 86 aa15.74■□□□□ 0.11
NUP85-207ENST00000578294 ZCCHC17Q9NP64 241 aaKnown RBP15.74■□□□□ 0.11
NUP85-207ENST00000578294 PICK1Q9NRD5 415 aa15.74■□□□□ 0.11
NUP85-207ENST00000578294 AK9Q5TCS8 1911 aa15.74■□□□□ 0.11
NUP85-207ENST00000578294 FLT1P17948 1338 aa15.73■□□□□ 0.11
NUP85-207ENST00000578294 CCL15-CCL14A0A0B4J2E2 113 aa15.73■□□□□ 0.11
NUP85-207ENST00000578294 PHF20L1A8MW92 1017 aa15.73■□□□□ 0.11
NUP85-207ENST00000578294 PDE6AP16499 860 aa15.73■□□□□ 0.11
NUP85-207ENST00000578294 CCL15Q16663 113 aa15.73■□□□□ 0.11
NUP85-207ENST00000578294 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.73■□□□□ 0.11
NUP85-207ENST00000578294 TTC41PQ6P2S7 1318 aa15.72■□□□□ 0.11
NUP85-207ENST00000578294 MAGEB6P1A0A0J9YX57 407 aa15.72■□□□□ 0.11
NUP85-207ENST00000578294 IGF2BP3O00425 579 aaKnown RBP eCLIP15.72■□□□□ 0.11
NUP85-207ENST00000578294 TBC1D8O95759 1140 aa15.72■□□□□ 0.11
NUP85-207ENST00000578294 HLA-DOAP06340 250 aa15.72■□□□□ 0.11
NUP85-207ENST00000578294 USP5P45974 858 aa15.72■□□□□ 0.11
NUP85-207ENST00000578294 DYNLL1P63167 89 aaKnown RBP15.72■□□□□ 0.11
NUP85-207ENST00000578294 FOXP4Q8IVH2 680 aaPredicted RBP15.72■□□□□ 0.11
NUP85-207ENST00000578294 MAPKAPK5Q8IW41 473 aa15.72■□□□□ 0.11
NUP85-207ENST00000578294 MIGA1Q8NAN2 632 aa15.72■□□□□ 0.11
NUP85-207ENST00000578294 CNKSR2Q8WXI2 1034 aa15.72■□□□□ 0.11
NUP85-207ENST00000578294 TRIM34Q9BYJ4 488 aa15.72■□□□□ 0.11
NUP85-207ENST00000578294 TBC1D2Q9BYX2 928 aa15.72■□□□□ 0.11
NUP85-207ENST00000578294 ZNF532Q9HCE3 1301 aa15.71■□□□□ 0.11
NUP85-207ENST00000578294 GPR25O00155 361 aa15.71■□□□□ 0.11
NUP85-207ENST00000578294 CXCL11O14625 94 aa15.71■□□□□ 0.11
NUP85-207ENST00000578294 IRF6O14896 467 aa15.71■□□□□ 0.11
NUP85-207ENST00000578294 ERC2O15083 957 aa15.71■□□□□ 0.11
NUP85-207ENST00000578294 BRI3BPQ8WY22 251 aa15.71■□□□□ 0.11
NUP85-207ENST00000578294 RIOK1Q9BRS2 568 aaKnown RBP15.71■□□□□ 0.11
NUP85-207ENST00000578294 CRNKL1Q9BZJ0 848 aaKnown RBP15.71■□□□□ 0.11
NUP85-207ENST00000578294 RWDD1Q9H446 243 aaPredicted RBP15.71■□□□□ 0.11
NUP85-207ENST00000578294 KCNH4Q9UQ05 1017 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms