RNA–Protein interactions for RNA: ENST00000578208.1

GGA3-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-204ENST00000578208 RHBDL3P58872 404 aa14.13□□□□□ -0.15
GGA3-204ENST00000578208 VGLL4Q14135 290 aa14.13□□□□□ -0.15
GGA3-204ENST00000578208 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.13□□□□□ -0.15
GGA3-204ENST00000578208 MIGA2Q7L4E1 593 aa14.13□□□□□ -0.15
GGA3-204ENST00000578208 OPTNQ96CV9 577 aa14.13□□□□□ -0.15
GGA3-204ENST00000578208 RNF186Q9NXI6 227 aa14.13□□□□□ -0.15
GGA3-204ENST00000578208 NDUFB9Q9Y6M9 179 aa14.13□□□□□ -0.15
GGA3-204ENST00000578208 DOCK2Q92608 1830 aa14.13□□□□□ -0.15
GGA3-204ENST00000578208 AK9Q5TCS8 1911 aa14.12□□□□□ -0.15
GGA3-204ENST00000578208 GOLIM4O00461 696 aa14.12□□□□□ -0.15
GGA3-204ENST00000578208 SMARCA5O60264 1052 aaPredicted RBP14.12□□□□□ -0.15
GGA3-204ENST00000578208 NPM3O75607 178 aaKnown RBP14.12□□□□□ -0.15
GGA3-204ENST00000578208 AAMPQ13685 434 aa14.12□□□□□ -0.15
GGA3-204ENST00000578208 MAGEB6Q8N7X4 407 aa14.12□□□□□ -0.15
GGA3-204ENST00000578208 DDX4Q9NQI0 724 aaKnown RBP14.12□□□□□ -0.15
GGA3-204ENST00000578208 PCDHB15Q9Y5E8 787 aa14.12□□□□□ -0.15
GGA3-204ENST00000578208 COL2A1P02458 1487 aaPredicted RBP14.12□□□□□ -0.15
GGA3-204ENST00000578208 ALDH1A1P00352 501 aa14.11□□□□□ -0.15
GGA3-204ENST00000578208 ATP5JP18859 108 aa14.11□□□□□ -0.15
GGA3-204ENST00000578208 TM4SF4P48230 202 aa14.11□□□□□ -0.15
GGA3-204ENST00000578208 PPP4CP60510 307 aa14.11□□□□□ -0.15
GGA3-204ENST00000578208 OTUD7BQ6GQQ9 843 aa14.11□□□□□ -0.15
GGA3-204ENST00000578208 ERO1BQ86YB8 467 aa14.11□□□□□ -0.15
GGA3-204ENST00000578208 ZFPM1Q8IX07 1006 aa14.11□□□□□ -0.15
GGA3-204ENST00000578208 SH3RF3Q8TEJ3 882 aaPredicted RBP14.11□□□□□ -0.15
GGA3-204ENST00000578208 OTUD5Q96G74 571 aa14.11□□□□□ -0.15
GGA3-204ENST00000578208 OSBPL5Q9H0X9 879 aaPredicted RBP14.11□□□□□ -0.15
GGA3-204ENST00000578208 ANTXR1Q9H6X2 564 aa14.11□□□□□ -0.15
GGA3-204ENST00000578208 PAG1Q9NWQ8 432 aa14.11□□□□□ -0.15
GGA3-204ENST00000578208 PCNTO95613 3336 aa14.11□□□□□ -0.15
GGA3-204ENST00000578208 SPDYE5A6NIY4 337 aa14.1□□□□□ -0.15
GGA3-204ENST00000578208 GTF2A2P52657 109 aa14.1□□□□□ -0.15
GGA3-204ENST00000578208 MIGA1Q8NAN2 632 aa14.1□□□□□ -0.15
GGA3-204ENST00000578208 ZKSCAN4Q969J2 545 aaPredicted RBP14.1□□□□□ -0.15
GGA3-204ENST00000578208 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.1□□□□□ -0.153e-10■■■■□ 23.1
GGA3-204ENST00000578208 BOLA2Q9H3K6 86 aa14.1□□□□□ -0.15
GGA3-204ENST00000578208 SNCAIPQ9Y6H5 919 aa14.1□□□□□ -0.15
GGA3-204ENST00000578208 ATRNL1Q5VV63 1379 aa14.09□□□□□ -0.15
GGA3-204ENST00000578208 DDTLA6NHG4 134 aaPredicted RBP14.09□□□□□ -0.15
GGA3-204ENST00000578208 INPP5BP32019 993 aa14.09□□□□□ -0.15
GGA3-204ENST00000578208 GJA5P36382 358 aa14.09□□□□□ -0.15
GGA3-204ENST00000578208 USP5P45974 858 aa14.09□□□□□ -0.15
GGA3-204ENST00000578208 SLC9C2Q5TAH2 1124 aa14.09□□□□□ -0.15
GGA3-204ENST00000578208 ADGRA1Q86SQ6 560 aa14.09□□□□□ -0.15
GGA3-204ENST00000578208 TGFBRAP1Q8WUH2 860 aa14.09□□□□□ -0.15
GGA3-204ENST00000578208 TRIM34Q9BYJ4 488 aa14.09□□□□□ -0.15
GGA3-204ENST00000578208 DHX36Q9H2U1 1008 aaKnown RBP14.09□□□□□ -0.15
GGA3-204ENST00000578208 ECHDC1Q9NTX5 307 aa14.09□□□□□ -0.15
GGA3-204ENST00000578208 ZNF112Q9UJU3 913 aa14.09□□□□□ -0.15
GGA3-204ENST00000578208 CCL15-CCL14A0A0B4J2E2 113 aa14.08□□□□□ -0.16
GGA3-204ENST00000578208 HLA-DOAP06340 250 aa14.08□□□□□ -0.16
GGA3-204ENST00000578208 PDE6AP16499 860 aa14.08□□□□□ -0.16
GGA3-204ENST00000578208 DYNLL1P63167 89 aaKnown RBP14.08□□□□□ -0.16
GGA3-204ENST00000578208 PPATQ06203 517 aa14.08□□□□□ -0.16
GGA3-204ENST00000578208 PPIL2Q13356 520 aa14.08□□□□□ -0.16
GGA3-204ENST00000578208 CCL15Q16663 113 aa14.08□□□□□ -0.16
GGA3-204ENST00000578208 NOL9Q5SY16 702 aaKnown RBP14.08□□□□□ -0.16
GGA3-204ENST00000578208 SH3BP5LQ7L8J4 393 aa14.08□□□□□ -0.16
GGA3-204ENST00000578208 IFNL1Q8IU54 200 aa14.08□□□□□ -0.16
GGA3-204ENST00000578208 MAPKAPK5Q8IW41 473 aa14.08□□□□□ -0.16
GGA3-204ENST00000578208 CNKSR2Q8WXI2 1034 aa14.08□□□□□ -0.16
GGA3-204ENST00000578208 HAUS7Q99871 368 aa14.08□□□□□ -0.16
GGA3-204ENST00000578208 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.08□□□□□ -0.16
GGA3-204ENST00000578208 PICK1Q9NRD5 415 aa14.08□□□□□ -0.16
GGA3-204ENST00000578208 FLT1P17948 1338 aa14.08□□□□□ -0.16
GGA3-204ENST00000578208 MYO5AQ9Y4I1 1855 aaKnown RBP14.08□□□□□ -0.16
GGA3-204ENST00000578208 MAGEB6P1A0A0J9YX57 407 aa14.07□□□□□ -0.16
GGA3-204ENST00000578208 CETPP11597 493 aa14.07□□□□□ -0.16
GGA3-204ENST00000578208 SNAPC2Q13487 334 aa14.07□□□□□ -0.16
GGA3-204ENST00000578208 ZSCAN25Q6NSZ9 544 aa14.07□□□□□ -0.16
GGA3-204ENST00000578208 SCYL3Q8IZE3 742 aa14.07□□□□□ -0.16
GGA3-204ENST00000578208 CRACR2BQ8N4Y2 399 aaPredicted RBP14.07□□□□□ -0.16
GGA3-204ENST00000578208 GCC1Q96CN9 775 aa14.07□□□□□ -0.16
GGA3-204ENST00000578208 HERC5Q9UII4 1024 aaKnown RBP14.07□□□□□ -0.16
GGA3-204ENST00000578208 SUPT16HQ9Y5B9 1047 aaKnown RBP14.07□□□□□ -0.16
GGA3-204ENST00000578208 ZNF532Q9HCE3 1301 aa14.07□□□□□ -0.16
GGA3-204ENST00000578208 LAMB1P07942 1786 aa14.06□□□□□ -0.16
GGA3-204ENST00000578208 ERC2O15083 957 aa14.06□□□□□ -0.16
GGA3-204ENST00000578208 TBC1D12O60347 775 aa14.06□□□□□ -0.16
GGA3-204ENST00000578208 TBC1D8O95759 1140 aa14.06□□□□□ -0.16
GGA3-204ENST00000578208 HDAC1Q13547 482 aaPredicted RBP14.06□□□□□ -0.16
GGA3-204ENST00000578208 EDC3Q96F86 508 aaKnown RBP14.06□□□□□ -0.16
GGA3-204ENST00000578208 CRNKL1Q9BZJ0 848 aaKnown RBP14.06□□□□□ -0.16
GGA3-204ENST00000578208 RWDD1Q9H446 243 aaPredicted RBP14.06□□□□□ -0.16
GGA3-204ENST00000578208 PI4KBQ9UBF8 816 aa14.06□□□□□ -0.16
GGA3-204ENST00000578208 TESPA1A2RU30 521 aaPredicted RBP14.05□□□□□ -0.16
GGA3-204ENST00000578208 IGF2BP3O00425 579 aaKnown RBP eCLIP14.05□□□□□ -0.16
GGA3-204ENST00000578208 CTNND1O60716 968 aaKnown RBP14.05□□□□□ -0.16
GGA3-204ENST00000578208 MAP3K10Q02779 954 aa14.05□□□□□ -0.16
GGA3-204ENST00000578208 ANKRD45Q5TZF3 282 aa14.05□□□□□ -0.16
GGA3-204ENST00000578208 EXOC6Q8TAG9 804 aa14.05□□□□□ -0.16
GGA3-204ENST00000578208 MS4A4AQ96JQ5 239 aa14.05□□□□□ -0.16
GGA3-204ENST00000578208 CFHR5Q9BXR6 569 aa14.05□□□□□ -0.16
GGA3-204ENST00000578208 SAP30BPQ9UHR5 308 aaKnown RBP14.05□□□□□ -0.16
GGA3-204ENST00000578208 TTC41PQ6P2S7 1318 aa14.05□□□□□ -0.16
GGA3-204ENST00000578208 FOCADQ5VW36 1801 aa14.04□□□□□ -0.16
GGA3-204ENST00000578208 PHF20L1A8MW92 1017 aa14.04□□□□□ -0.16
GGA3-204ENST00000578208 IRF6O14896 467 aa14.04□□□□□ -0.16
GGA3-204ENST00000578208 LRRFIP1Q32MZ4 808 aaKnown RBP14.04□□□□□ -0.16
GGA3-204ENST00000578208 BRI3BPQ8WY22 251 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms