RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 HIBADHP31937 336 aaKnown RBP12.12□□□□□ -0.47
CRLF3-202ENST00000577725 SP3Q02447 781 aa12.12□□□□□ -0.47
CRLF3-202ENST00000577725 CHAF1AQ13111 956 aaPredicted RBP12.12□□□□□ -0.47
CRLF3-202ENST00000577725 CAVIN4Q5BKX8 364 aa12.12□□□□□ -0.47
CRLF3-202ENST00000577725 CCDC129Q6ZRS4 1044 aa12.12□□□□□ -0.47
CRLF3-202ENST00000577725 TMC4Q7Z404 712 aa12.12□□□□□ -0.47
CRLF3-202ENST00000577725 TBC1D16Q8TBP0 767 aa12.12□□□□□ -0.47
CRLF3-202ENST00000577725 TBC1D32Q96NH3 1257 aa12.12□□□□□ -0.47
CRLF3-202ENST00000577725 SEC62Q99442 399 aaKnown RBP12.12□□□□□ -0.47
CRLF3-202ENST00000577725 C22orf23Q9BZE7 217 aa12.12□□□□□ -0.47
CRLF3-202ENST00000577725 PTCH2Q9Y6C5 1203 aa12.12□□□□□ -0.47
CRLF3-202ENST00000577725 RFX7Q2KHR2 1363 aa12.11□□□□□ -0.47
CRLF3-202ENST00000577725 RIMBP2O15034 1052 aa12.11□□□□□ -0.47
CRLF3-202ENST00000577725 ARHGEF6Q15052 776 aa12.11□□□□□ -0.47
CRLF3-202ENST00000577725 SPRYD7Q5W111 196 aa12.11□□□□□ -0.47
CRLF3-202ENST00000577725 USP26Q9BXU7 913 aa12.11□□□□□ -0.47
CRLF3-202ENST00000577725 ANO2Q9NQ90 1003 aa12.11□□□□□ -0.47
CRLF3-202ENST00000577725 GNL3LQ9NVN8 582 aaKnown RBP12.11□□□□□ -0.47
CRLF3-202ENST00000577725 DOCK2Q92608 1830 aa12.11□□□□□ -0.47
CRLF3-202ENST00000577725 HIP1O00291 1037 aa12.1□□□□□ -0.47
CRLF3-202ENST00000577725 RNF113AO15541 343 aaKnown RBP12.1□□□□□ -0.47
CRLF3-202ENST00000577725 FRAT2O75474 233 aaPredicted RBP12.1□□□□□ -0.47
CRLF3-202ENST00000577725 IDH1O75874 414 aaKnown RBP12.1□□□□□ -0.47
CRLF3-202ENST00000577725 NF2P35240 595 aa12.1□□□□□ -0.47
CRLF3-202ENST00000577725 ZNF589Q86UQ0 364 aaPredicted RBP12.1□□□□□ -0.47
CRLF3-202ENST00000577725 IFNLR1Q8IU57 520 aaPredicted RBP12.1□□□□□ -0.47
CRLF3-202ENST00000577725 SHISA4Q96DD7 197 aa12.1□□□□□ -0.47
CRLF3-202ENST00000577725 LSG1Q9H089 658 aaKnown RBP12.1□□□□□ -0.47
CRLF3-202ENST00000577725 DBNDD1Q9H9R9 158 aa12.1□□□□□ -0.47
CRLF3-202ENST00000577725 PODXL2Q9NZ53 605 aa12.1□□□□□ -0.47
CRLF3-202ENST00000577725 MED23Q9ULK4 1368 aa12.09□□□□□ -0.47
CRLF3-202ENST00000577725 M0R2C6 588 aa12.09□□□□□ -0.47
CRLF3-202ENST00000577725 IGF2BP3O00425 579 aaKnown RBP eCLIP12.09□□□□□ -0.47
CRLF3-202ENST00000577725 REC8O95072 547 aa12.09□□□□□ -0.47
CRLF3-202ENST00000577725 CAP1Q01518 475 aa12.09□□□□□ -0.47
CRLF3-202ENST00000577725 PTH1RQ03431 593 aa12.09□□□□□ -0.47
CRLF3-202ENST00000577725 CRHR2Q13324 411 aa12.09□□□□□ -0.47
CRLF3-202ENST00000577725 WASHC4Q2M389 1173 aa12.09□□□□□ -0.47
CRLF3-202ENST00000577725 ZMYM1Q5SVZ6 1142 aa12.09□□□□□ -0.47
CRLF3-202ENST00000577725 ZNF804AQ7Z570 1209 aa12.09□□□□□ -0.47
CRLF3-202ENST00000577725 NKX2-3Q8TAU0 364 aa12.09□□□□□ -0.47
CRLF3-202ENST00000577725 RUFY2Q8WXA3 655 aa12.09□□□□□ -0.47
CRLF3-202ENST00000577725 DENND2AQ9ULE3 1009 aa12.09□□□□□ -0.47
CRLF3-202ENST00000577725 PDE6AP16499 860 aa12.08□□□□□ -0.48
CRLF3-202ENST00000577725 ZNF280AP59817 542 aaPredicted RBP12.08□□□□□ -0.48
CRLF3-202ENST00000577725 TTF1Q15361 905 aaPredicted RBP12.08□□□□□ -0.48
CRLF3-202ENST00000577725 DOK7Q18PE1 504 aa12.08□□□□□ -0.48
CRLF3-202ENST00000577725 PRAMEF18Q5VWM3 479 aa12.08□□□□□ -0.48
CRLF3-202ENST00000577725 OTUD7BQ6GQQ9 843 aa12.08□□□□□ -0.48
CRLF3-202ENST00000577725 C15orf52Q6ZUT6 534 aaKnown RBP12.08□□□□□ -0.48
CRLF3-202ENST00000577725 ARMC9Q7Z3E5 817 aa12.08□□□□□ -0.48
CRLF3-202ENST00000577725 UBE2Q1Q7Z7E8 422 aa12.08□□□□□ -0.48
CRLF3-202ENST00000577725 BBXQ8WY36 941 aaPredicted RBP12.08□□□□□ -0.48
CRLF3-202ENST00000577725 OSBP2Q969R2 916 aa12.08□□□□□ -0.48
CRLF3-202ENST00000577725 ABCF2Q9UG63 623 aa12.08□□□□□ -0.48
CRLF3-202ENST00000577725 RAPGEFL1Q9UHV5 662 aa12.08□□□□□ -0.48
CRLF3-202ENST00000577725 MAST3O60307 1309 aa12.08□□□□□ -0.48
CRLF3-202ENST00000577725 RAD50Q92878 1312 aa12.08□□□□□ -0.48
CRLF3-202ENST00000577725 POLR2AP24928 1970 aaKnown RBP12.07□□□□□ -0.48
CRLF3-202ENST00000577725 ECE2O60344 883 aa12.07□□□□□ -0.48
CRLF3-202ENST00000577725 VIL1P09327 827 aaKnown RBP12.07□□□□□ -0.48
CRLF3-202ENST00000577725 ADD2P35612 726 aa12.07□□□□□ -0.48
CRLF3-202ENST00000577725 ANP32AP39687 249 aaKnown RBP12.07□□□□□ -0.48
CRLF3-202ENST00000577725 LRIT3Q3SXY7 679 aa12.07□□□□□ -0.48
CRLF3-202ENST00000577725 MCMDC2Q4G0Z9 681 aa12.07□□□□□ -0.48
CRLF3-202ENST00000577725 SLC9C2Q5TAH2 1124 aa12.07□□□□□ -0.48
CRLF3-202ENST00000577725 KIAA1211Q6ZU35 1233 aa12.07□□□□□ -0.48
CRLF3-202ENST00000577725 MAGEB6Q8N7X4 407 aa12.07□□□□□ -0.48
CRLF3-202ENST00000577725 TDRD7Q8NHU6 1098 aaKnown RBP12.07□□□□□ -0.48
CRLF3-202ENST00000577725 SH3TC2Q8TF17 1288 aa12.07□□□□□ -0.48
CRLF3-202ENST00000577725 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.07□□□□□ -0.483e-7■■■■■ 42.3
CRLF3-202ENST00000577725 CD209Q9NNX6 404 aa12.07□□□□□ -0.48
CRLF3-202ENST00000577725 KCNQ5Q9NR82 932 aa12.07□□□□□ -0.48
CRLF3-202ENST00000577725 RAI14Q9P0K7 980 aa12.07□□□□□ -0.48
CRLF3-202ENST00000577725 LRP2BPQ9P2M1 347 aa12.07□□□□□ -0.48
CRLF3-202ENST00000577725 RPTORQ8N122 1335 aa12.07□□□□□ -0.48
CRLF3-202ENST00000577725 ZNF532Q9HCE3 1301 aa12.07□□□□□ -0.48
CRLF3-202ENST00000577725 TCRBV5S4A2TA0A5A2 114 aa12.06□□□□□ -0.48
CRLF3-202ENST00000577725 SEMA3EO15041 775 aa12.06□□□□□ -0.48
CRLF3-202ENST00000577725 ZBTB48P10074 688 aaPredicted RBP12.06□□□□□ -0.48
CRLF3-202ENST00000577725 BMP8BP34820 402 aa12.06□□□□□ -0.48
CRLF3-202ENST00000577725 RBM25P49756 843 aaKnown RBP12.06□□□□□ -0.48
CRLF3-202ENST00000577725 LDLRAD1Q5T700 205 aa12.06□□□□□ -0.48
CRLF3-202ENST00000577725 SAMD1Q6SPF0 538 aaPredicted RBP12.06□□□□□ -0.48
CRLF3-202ENST00000577725 FBXW7Q969H0 707 aa12.06□□□□□ -0.48
CRLF3-202ENST00000577725 HELLSQ9NRZ9 838 aa12.06□□□□□ -0.48
CRLF3-202ENST00000577725 PALD1Q9ULE6 856 aa12.06□□□□□ -0.48
CRLF3-202ENST00000577725 SCAF8Q9UPN6 1271 aaKnown RBP12.06□□□□□ -0.48
CRLF3-202ENST00000577725 CCDC171Q6TFL3 1326 aa12.06□□□□□ -0.48
CRLF3-202ENST00000577725 EVI5O60447 810 aa12.05□□□□□ -0.48
CRLF3-202ENST00000577725 EIF5BO60841 1220 aaKnown RBP12.05□□□□□ -0.48
CRLF3-202ENST00000577725 MAP3K12Q12852 859 aa12.05□□□□□ -0.48
CRLF3-202ENST00000577725 GRIK5Q16478 980 aa12.05□□□□□ -0.48
CRLF3-202ENST00000577725 VPS53Q5VIR6 699 aa12.05□□□□□ -0.48
CRLF3-202ENST00000577725 APPBP2Q92624 585 aa12.05□□□□□ -0.48
CRLF3-202ENST00000577725 SYMPKQ92797 1274 aaKnown RBP12.05□□□□□ -0.48
CRLF3-202ENST00000577725 EYA3Q99504 573 aa12.05□□□□□ -0.48
CRLF3-202ENST00000577725 KIF2CQ99661 725 aa12.05□□□□□ -0.48
CRLF3-202ENST00000577725 ZC3H12CQ9C0D7 883 aaKnown RBP12.05□□□□□ -0.48
CRLF3-202ENST00000577725 PUS7LQ9H0K6 701 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms