RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 ERICH6Q7L0X2 663 aa17.57■□□□□ 0.4
SMARCD2-205ENST00000577686 PRRT2Q7Z6L0 340 aaPredicted RBP17.57■□□□□ 0.4
SMARCD2-205ENST00000577686 SMCR8Q8TEV9 937 aaPredicted RBP17.57■□□□□ 0.4
SMARCD2-205ENST00000577686 FAM163AQ96GL9 167 aaPredicted RBP17.57■□□□□ 0.4
SMARCD2-205ENST00000577686 PNMA3Q9UL41 463 aa17.57■□□□□ 0.4
SMARCD2-205ENST00000577686 KIAA0100Q14667 2235 aaKnown RBP17.57■□□□□ 0.4
SMARCD2-205ENST00000577686 MROH7-TTC4A0A0A0MT08 1334 aa17.56■□□□□ 0.4
SMARCD2-205ENST00000577686 ECM2O94769 699 aaPredicted RBP17.56■□□□□ 0.4
SMARCD2-205ENST00000577686 GJB1P08034 283 aa17.56■□□□□ 0.4
SMARCD2-205ENST00000577686 PTPRAP18433 802 aa17.56■□□□□ 0.4
SMARCD2-205ENST00000577686 BTDP43251 543 aa17.56■□□□□ 0.4
SMARCD2-205ENST00000577686 NOL10Q9BSC4 688 aaKnown RBP17.56■□□□□ 0.4
SMARCD2-205ENST00000577686 TBC1D2Q9BYX2 928 aa17.56■□□□□ 0.4
SMARCD2-205ENST00000577686 PA2G4Q9UQ80 394 aaKnown RBP17.56■□□□□ 0.4
SMARCD2-205ENST00000577686 A0A1B0GUL7 405 aa17.55■□□□□ 0.4
SMARCD2-205ENST00000577686 IPO8O15397 1037 aaKnown RBP17.55■□□□□ 0.4
SMARCD2-205ENST00000577686 SRGAP3O43295 1099 aa17.55■□□□□ 0.4
SMARCD2-205ENST00000577686 BCRP11274 1271 aa17.55■□□□□ 0.4
SMARCD2-205ENST00000577686 PABPC4Q13310 644 aaKnown RBP eCLIP17.55■□□□□ 0.4
SMARCD2-205ENST00000577686 PICALMQ13492 652 aa17.55■□□□□ 0.4
SMARCD2-205ENST00000577686 RASGRF1Q13972 1273 aa17.55■□□□□ 0.4
SMARCD2-205ENST00000577686 ARHGAP45Q92619 1136 aa17.55■□□□□ 0.4
SMARCD2-205ENST00000577686 DPF3Q92784 378 aa17.55■□□□□ 0.4
SMARCD2-205ENST00000577686 CDCA7LQ96GN5 454 aa17.55■□□□□ 0.4
SMARCD2-205ENST00000577686 RNF208Q9H0X6 261 aa17.55■□□□□ 0.4
SMARCD2-205ENST00000577686 AK9Q5TCS8 1911 aa17.55■□□□□ 0.4
SMARCD2-205ENST00000577686 ATRNL1Q5VV63 1379 aa17.54■□□□□ 0.4
SMARCD2-205ENST00000577686 DOCK2Q92608 1830 aa17.54■□□□□ 0.4
SMARCD2-205ENST00000577686 PHF20L1A8MW92 1017 aa17.54■□□□□ 0.4
SMARCD2-205ENST00000577686 NPM3O75607 178 aaKnown RBP17.54■□□□□ 0.4
SMARCD2-205ENST00000577686 CYP2C8P10632 490 aa17.54■□□□□ 0.4
SMARCD2-205ENST00000577686 CCL5P13501 91 aa17.54■□□□□ 0.4
SMARCD2-205ENST00000577686 ADORA1P30542 326 aa17.54■□□□□ 0.4
SMARCD2-205ENST00000577686 GJA8P48165 433 aa17.54■□□□□ 0.4
SMARCD2-205ENST00000577686 PRKCZQ05513 592 aa17.54■□□□□ 0.4
SMARCD2-205ENST00000577686 MOGSQ13724 837 aa17.54■□□□□ 0.4
SMARCD2-205ENST00000577686 GPAT2Q6NUI2 795 aa17.54■□□□□ 0.4
SMARCD2-205ENST00000577686 TRMT2AQ8IZ69 625 aaKnown RBP17.54■□□□□ 0.4
SMARCD2-205ENST00000577686 MEIS3Q99687 375 aa17.54■□□□□ 0.4
SMARCD2-205ENST00000577686 NR2E3Q9Y5X4 410 aa17.54■□□□□ 0.4
SMARCD2-205ENST00000577686 HTTP42858 3142 aa17.54■□□□□ 0.4
SMARCD2-205ENST00000577686 RFX7Q2KHR2 1363 aa17.53■□□□□ 0.4
SMARCD2-205ENST00000577686 TNPO2O14787 897 aaKnown RBP17.53■□□□□ 0.4
SMARCD2-205ENST00000577686 MAP3K10Q02779 954 aa17.53■□□□□ 0.4
SMARCD2-205ENST00000577686 MTFR1Q15390 333 aa17.53■□□□□ 0.4
SMARCD2-205ENST00000577686 ZFPM1Q8IX07 1006 aa17.53■□□□□ 0.4
SMARCD2-205ENST00000577686 COA7Q96BR5 231 aa17.53■□□□□ 0.4
SMARCD2-205ENST00000577686 XAGE2Q96GT9 111 aa17.53■□□□□ 0.4
SMARCD2-205ENST00000577686 NEUROD6Q96NK8 337 aa17.53■□□□□ 0.4
SMARCD2-205ENST00000577686 AFG3L2Q9Y4W6 797 aa17.53■□□□□ 0.4
SMARCD2-205ENST00000577686 GPR75-ASB3A0A0A6YYF3 556 aa17.52■□□□□ 0.4
SMARCD2-205ENST00000577686 H0YGN5 161 aa17.52■□□□□ 0.4
SMARCD2-205ENST00000577686 TBC1D12O60347 775 aa17.52■□□□□ 0.4
SMARCD2-205ENST00000577686 TIMM10P62072 90 aa17.52■□□□□ 0.4
SMARCD2-205ENST00000577686 MTX1Q13505 466 aa17.52■□□□□ 0.4
SMARCD2-205ENST00000577686 OSBPL5Q9H0X9 879 aaPredicted RBP17.52■□□□□ 0.4
SMARCD2-205ENST00000577686 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.52■□□□□ 0.4
SMARCD2-205ENST00000577686 AGTPBP1Q9UPW5 1226 aa17.52■□□□□ 0.4
SMARCD2-205ENST00000577686 COLQQ9Y215 455 aaPredicted RBP17.52■□□□□ 0.4
SMARCD2-205ENST00000577686 COL2A1P02458 1487 aaPredicted RBP17.51■□□□□ 0.39
SMARCD2-205ENST00000577686 TRIM75PA6NK02 468 aa17.51■□□□□ 0.39
SMARCD2-205ENST00000577686 ADCY3O60266 1144 aa17.51■□□□□ 0.39
SMARCD2-205ENST00000577686 UQCRFS1P1P0C7P4 283 aa17.51■□□□□ 0.39
SMARCD2-205ENST00000577686 CTGFP29279 349 aa17.51■□□□□ 0.39
SMARCD2-205ENST00000577686 FXR1P51114 621 aaKnown RBP eCLIP17.51■□□□□ 0.39
SMARCD2-205ENST00000577686 MECOMQ03112 1051 aa17.51■□□□□ 0.39
SMARCD2-205ENST00000577686 TFCP2Q12800 502 aa17.51■□□□□ 0.39
SMARCD2-205ENST00000577686 G3BP1Q13283 466 aaKnown RBP eCLIP17.51■□□□□ 0.39
SMARCD2-205ENST00000577686 IRF5Q13568 498 aa17.51■□□□□ 0.39
SMARCD2-205ENST00000577686 PROCA1Q8NCQ7 364 aaPredicted RBP17.51■□□□□ 0.39
SMARCD2-205ENST00000577686 PXYLP1Q8TE99 480 aa17.51■□□□□ 0.39
SMARCD2-205ENST00000577686 AS3MTQ9HBK9 375 aa17.51■□□□□ 0.39
SMARCD2-205ENST00000577686 RAI14Q9P0K7 980 aa17.51■□□□□ 0.39
SMARCD2-205ENST00000577686 DDTLA6NHG4 134 aaPredicted RBP17.5■□□□□ 0.39
SMARCD2-205ENST00000577686 FARP2O94887 1054 aaPredicted RBP17.5■□□□□ 0.39
SMARCD2-205ENST00000577686 GNAI2P04899 355 aa17.5■□□□□ 0.39
SMARCD2-205ENST00000577686 GCLCP48506 637 aaPredicted RBP17.5■□□□□ 0.39
SMARCD2-205ENST00000577686 RARSP54136 660 aaKnown RBP17.5■□□□□ 0.39
SMARCD2-205ENST00000577686 SPATA5Q8NB90 893 aa17.5■□□□□ 0.39
SMARCD2-205ENST00000577686 U2AF1L4Q8WU68 220 aaKnown RBP17.5■□□□□ 0.39
SMARCD2-205ENST00000577686 SHISA4Q96DD7 197 aa17.5■□□□□ 0.39
SMARCD2-205ENST00000577686 ZSWIM8A7E2V4 1837 aa17.49■□□□□ 0.39
SMARCD2-205ENST00000577686 BAG3O95817 575 aa17.49■□□□□ 0.39
SMARCD2-205ENST00000577686 PLCG2P16885 1265 aa17.49■□□□□ 0.39
SMARCD2-205ENST00000577686 FAM110CQ1W6H9 321 aa17.49■□□□□ 0.39
SMARCD2-205ENST00000577686 SH3BP5LQ7L8J4 393 aa17.49■□□□□ 0.39
SMARCD2-205ENST00000577686 TRIM34Q9BYJ4 488 aa17.49■□□□□ 0.39
SMARCD2-205ENST00000577686 DDX4Q9NQI0 724 aaKnown RBP17.49■□□□□ 0.39
SMARCD2-205ENST00000577686 LRP2BPQ9P2M1 347 aa17.49■□□□□ 0.39
SMARCD2-205ENST00000577686 HERC5Q9UII4 1024 aaKnown RBP17.49■□□□□ 0.39
SMARCD2-205ENST00000577686 MYH2Q9UKX2 1941 aa17.49■□□□□ 0.39
SMARCD2-205ENST00000577686 DOCK1Q14185 1865 aa17.48■□□□□ 0.39
SMARCD2-205ENST00000577686 IGSF3O75054 1194 aa17.48■□□□□ 0.39
SMARCD2-205ENST00000577686 FLT3LGP49771 235 aa17.48■□□□□ 0.39
SMARCD2-205ENST00000577686 CHRDL2Q6WN34 429 aa17.48■□□□□ 0.39
SMARCD2-205ENST00000577686 HMG20BQ9P0W2 317 aa17.48■□□□□ 0.39
SMARCD2-205ENST00000577686 TAOK2Q9UL54 1235 aa17.48■□□□□ 0.39
SMARCD2-205ENST00000577686 SGPL1O95470 568 aa17.47■□□□□ 0.39
SMARCD2-205ENST00000577686 INHAP05111 366 aa17.47■□□□□ 0.39
SMARCD2-205ENST00000577686 ARID4AP29374 1257 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms