RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 CDK5RAP2Q96SN8 1893 aa14.75□□□□□ -0.05
TSEN54-204ENST00000577197 COL2A1P02458 1487 aaPredicted RBP14.75□□□□□ -0.05
TSEN54-204ENST00000577197 GOLGB1Q14789 3259 aaKnown RBP14.74□□□□□ -0.05
TSEN54-204ENST00000577197 NAV1Q8NEY1 1877 aa14.74□□□□□ -0.05
TSEN54-204ENST00000577197 DDNO94850 711 aaPredicted RBP14.74□□□□□ -0.05
TSEN54-204ENST00000577197 SLC3A2P08195 630 aaKnown RBP14.74□□□□□ -0.05
TSEN54-204ENST00000577197 USP17L8P0C7I0 530 aa14.74□□□□□ -0.05
TSEN54-204ENST00000577197 BTDP43251 543 aa14.74□□□□□ -0.05
TSEN54-204ENST00000577197 GMPSP49915 693 aaPredicted RBP14.74□□□□□ -0.05
TSEN54-204ENST00000577197 RHBDL3P58872 404 aa14.74□□□□□ -0.05
TSEN54-204ENST00000577197 EXOSC10Q01780 885 aaKnown RBP14.74□□□□□ -0.05
TSEN54-204ENST00000577197 DIXDC1Q155Q3 683 aa14.74□□□□□ -0.05
TSEN54-204ENST00000577197 KIAA0825Q8IV33 1275 aa14.74□□□□□ -0.05
TSEN54-204ENST00000577197 AMOTL1Q8IY63 956 aa14.74□□□□□ -0.05
TSEN54-204ENST00000577197 OGFOD1Q8N543 542 aa14.74□□□□□ -0.05
TSEN54-204ENST00000577197 MTMR14Q8NCE2 650 aa14.74□□□□□ -0.05
TSEN54-204ENST00000577197 L3MBTL3Q96JM7 780 aaPredicted RBP14.74□□□□□ -0.05
TSEN54-204ENST00000577197 KRT23Q9C075 422 aa14.74□□□□□ -0.05
TSEN54-204ENST00000577197 PDRG1Q9NUG6 133 aa14.74□□□□□ -0.05
TSEN54-204ENST00000577197 LIMCH1Q9UPQ0 1083 aa14.74□□□□□ -0.05
TSEN54-204ENST00000577197 ZBTB12Q9Y330 459 aaPredicted RBP14.74□□□□□ -0.05
TSEN54-204ENST00000577197 LMOD1P29536 600 aaPredicted RBP14.73□□□□□ -0.05
TSEN54-204ENST00000577197 MCM5P33992 734 aa14.73□□□□□ -0.05
TSEN54-204ENST00000577197 EVCP57679 992 aa14.73□□□□□ -0.05
TSEN54-204ENST00000577197 DYNLL1P63167 89 aaKnown RBP14.73□□□□□ -0.05
TSEN54-204ENST00000577197 PPARAQ07869 468 aa14.73□□□□□ -0.05
TSEN54-204ENST00000577197 CUL4AQ13619 759 aa14.73□□□□□ -0.05
TSEN54-204ENST00000577197 GRIK5Q16478 980 aa14.73□□□□□ -0.05
TSEN54-204ENST00000577197 AKNAD1Q5T1N1 836 aa14.73□□□□□ -0.05
TSEN54-204ENST00000577197 RALYLQ86SE5 291 aaKnown RBP14.73□□□□□ -0.05
TSEN54-204ENST00000577197 MB21D2Q8IYB1 491 aaPredicted RBP14.73□□□□□ -0.05
TSEN54-204ENST00000577197 UPF3BQ9BZI7 483 aaKnown RBP14.73□□□□□ -0.05
TSEN54-204ENST00000577197 GPRC5DQ9NZD1 345 aa14.73□□□□□ -0.05
TSEN54-204ENST00000577197 ECM29Q5VYK3 1845 aa14.73□□□□□ -0.05
TSEN54-204ENST00000577197 F8W031 263 aaPredicted RBP14.72□□□□□ -0.05
TSEN54-204ENST00000577197 PRKAB2O43741 272 aa14.72□□□□□ -0.05
TSEN54-204ENST00000577197 ORC4O43929 436 aa14.72□□□□□ -0.05
TSEN54-204ENST00000577197 CD2BP2O95400 341 aaKnown RBP14.72□□□□□ -0.05
TSEN54-204ENST00000577197 PDIA4P13667 645 aaKnown RBP14.72□□□□□ -0.05
TSEN54-204ENST00000577197 SCNN1DP51172 638 aa14.72□□□□□ -0.05
TSEN54-204ENST00000577197 ZNF280AP59817 542 aaPredicted RBP14.72□□□□□ -0.05
TSEN54-204ENST00000577197 STOX1Q6ZVD7 989 aa14.72□□□□□ -0.05
TSEN54-204ENST00000577197 TMEM87BQ96K49 555 aa14.72□□□□□ -0.05
TSEN54-204ENST00000577197 NBPF3Q9H094 633 aa14.72□□□□□ -0.05
TSEN54-204ENST00000577197 ZNF287Q9HBT7 754 aa14.72□□□□□ -0.05
TSEN54-204ENST00000577197 CNOT7Q9UIV1 285 aaKnown RBP14.72□□□□□ -0.05
TSEN54-204ENST00000577197 IQCA1LA6NCM1 817 aa14.71□□□□□ -0.05
TSEN54-204ENST00000577197 H7C1D1 291 aa14.71□□□□□ -0.05
TSEN54-204ENST00000577197 CRKP46108 304 aa14.71□□□□□ -0.05
TSEN54-204ENST00000577197 AK2P54819 239 aa14.71□□□□□ -0.05
TSEN54-204ENST00000577197 FKBP1CQ5VVH2 108 aa14.71□□□□□ -0.05
TSEN54-204ENST00000577197 APOBEC3HQ6NTF7 200 aaKnown RBP14.71□□□□□ -0.05
TSEN54-204ENST00000577197 CTR9Q6PD62 1173 aa14.71□□□□□ -0.05
TSEN54-204ENST00000577197 MFSD6Q6ZSS7 791 aa14.71□□□□□ -0.05
TSEN54-204ENST00000577197 MICALL2Q8IY33 904 aa14.71□□□□□ -0.05
TSEN54-204ENST00000577197 SDR42E1Q8WUS8 393 aa14.71□□□□□ -0.05
TSEN54-204ENST00000577197 IDI2Q9BXS1 227 aa14.71□□□□□ -0.05
TSEN54-204ENST00000577197 CWC22Q9HCG8 908 aaKnown RBP14.71□□□□□ -0.05
TSEN54-204ENST00000577197 CIZ1Q9ULV3 898 aaPredicted RBP14.71□□□□□ -0.05
TSEN54-204ENST00000577197 BAZ2AQ9UIF9 1905 aaKnown RBP14.7□□□□□ -0.06
TSEN54-204ENST00000577197 WDR90Q96KV7 1748 aa14.7□□□□□ -0.06
TSEN54-204ENST00000577197 USP5P45974 858 aa14.7□□□□□ -0.06
TSEN54-204ENST00000577197 RCAN1P53805 252 aa14.7□□□□□ -0.06
TSEN54-204ENST00000577197 C12orf60Q5U649 245 aa14.7□□□□□ -0.06
TSEN54-204ENST00000577197 TBC1D10CQ8IV04 446 aa14.7□□□□□ -0.06
TSEN54-204ENST00000577197 TEX11Q8IYF3 940 aa14.7□□□□□ -0.06
TSEN54-204ENST00000577197 SH3RF3Q8TEJ3 882 aaPredicted RBP14.7□□□□□ -0.06
TSEN54-204ENST00000577197 TMX3Q96JJ7 454 aa14.7□□□□□ -0.06
TSEN54-204ENST00000577197 HACL1Q9UJ83 578 aa14.7□□□□□ -0.06
TSEN54-204ENST00000577197 TAF6LQ9Y6J9 622 aa14.7□□□□□ -0.06
TSEN54-204ENST00000577197 FLT1P17948 1338 aa14.69□□□□□ -0.06
TSEN54-204ENST00000577197 LIFRP42702 1097 aa14.69□□□□□ -0.06
TSEN54-204ENST00000577197 PDE4BQ07343 736 aa14.69□□□□□ -0.06
TSEN54-204ENST00000577197 CCDC178Q5BJE1 867 aa14.69□□□□□ -0.06
TSEN54-204ENST00000577197 TMTC2Q8N394 836 aa14.69□□□□□ -0.06
TSEN54-204ENST00000577197 ESR2Q92731 530 aa14.69□□□□□ -0.06
TSEN54-204ENST00000577197 DHX36Q9H2U1 1008 aaKnown RBP14.69□□□□□ -0.06
TSEN54-204ENST00000577197 MYOZ2Q9NPC6 264 aa14.69□□□□□ -0.06
TSEN54-204ENST00000577197 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.69□□□□□ -0.06
TSEN54-204ENST00000577197 MYH1P12882 1939 aa14.68□□□□□ -0.06
TSEN54-204ENST00000577197 USP17L12C9JPN9 530 aa14.68□□□□□ -0.06
TSEN54-204ENST00000577197 USP17L21D6R901 530 aa14.68□□□□□ -0.06
TSEN54-204ENST00000577197 HAND2P61296 217 aa14.68□□□□□ -0.06
TSEN54-204ENST00000577197 TOB2Q14106 344 aaPredicted RBP14.68□□□□□ -0.06
TSEN54-204ENST00000577197 SART3Q15020 963 aaKnown RBP14.68□□□□□ -0.06
TSEN54-204ENST00000577197 DLGAP5Q15398 846 aa14.68□□□□□ -0.06
TSEN54-204ENST00000577197 CFAP100Q494V2 611 aa14.68□□□□□ -0.06
TSEN54-204ENST00000577197 TTC6Q86TZ1 520 aa14.68□□□□□ -0.06
TSEN54-204ENST00000577197 SGMS1Q86VZ5 419 aa14.68□□□□□ -0.06
TSEN54-204ENST00000577197 ZNF274Q96GC6 653 aaPredicted RBP14.68□□□□□ -0.06
TSEN54-204ENST00000577197 EHD4Q9H223 541 aa14.68□□□□□ -0.06
TSEN54-204ENST00000577197 ADARB2Q9NS39 739 aaKnown RBP14.68□□□□□ -0.06
TSEN54-204ENST00000577197 MCM9Q9NXL9 1143 aa14.68□□□□□ -0.06
TSEN54-204ENST00000577197 ATRNL1Q5VV63 1379 aa14.68□□□□□ -0.06
TSEN54-204ENST00000577197 SCN4AP35499 1836 aa14.67□□□□□ -0.06
TSEN54-204ENST00000577197 SPDYE2BA6NHP3 402 aa14.67□□□□□ -0.06
TSEN54-204ENST00000577197 ENTPD3O75355 529 aa14.67□□□□□ -0.06
TSEN54-204ENST00000577197 WDHD1O75717 1129 aaPredicted RBP14.67□□□□□ -0.06
TSEN54-204ENST00000577197 HSP90AA1P07900 732 aaKnown RBP14.67□□□□□ -0.06
TSEN54-204ENST00000577197 SPDYE6P0CI01 402 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms