RNA–Protein interactions for RNA: ENST00000576484.1

CDC27-219, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-219ENST00000576484 SYNGAP1Q96PV0 1343 aa8.24□□□□□ -1.09
CDC27-219ENST00000576484 EIF4A3P38919 411 aaKnown RBP8.23□□□□□ -1.09
CDC27-219ENST00000576484 CDK8P49336 464 aa8.23□□□□□ -1.09
CDC27-219ENST00000576484 HNRNPUQ00839 825 aaKnown RBP eCLIP8.23□□□□□ -1.09
CDC27-219ENST00000576484 SNAP47Q5SQN1 464 aa8.23□□□□□ -1.09
CDC27-219ENST00000576484 FBXL19Q6PCT2 694 aa8.23□□□□□ -1.09
CDC27-219ENST00000576484 GOLM1Q8NBJ4 401 aa8.23□□□□□ -1.09
CDC27-219ENST00000576484 C2CD4AQ8NCU7 369 aaPredicted RBP8.23□□□□□ -1.09
CDC27-219ENST00000576484 UTP4Q969X6 686 aaKnown RBP8.23□□□□□ -1.09
CDC27-219ENST00000576484 FAM46AQ96IP4 442 aaKnown RBP8.23□□□□□ -1.09
CDC27-219ENST00000576484 KCNQ5Q9NR82 932 aa8.23□□□□□ -1.09
CDC27-219ENST00000576484 F13A1P00488 732 aa8.22□□□□□ -1.09
CDC27-219ENST00000576484 H2AFB1P0C5Y9 115 aa8.22□□□□□ -1.09
CDC27-219ENST00000576484 H2AFB2P0C5Z0 115 aa8.22□□□□□ -1.09
CDC27-219ENST00000576484 ID3Q02535 119 aa8.22□□□□□ -1.09
CDC27-219ENST00000576484 INPP5AQ14642 412 aa8.22□□□□□ -1.09
CDC27-219ENST00000576484 ZC3H12AQ5D1E8 599 aaKnown RBP8.22□□□□□ -1.09
CDC27-219ENST00000576484 LRFN4Q6PJG9 635 aa8.22□□□□□ -1.09
CDC27-219ENST00000576484 JARID2Q92833 1246 aaPredicted RBP8.22□□□□□ -1.09
CDC27-219ENST00000576484 CRIM1Q9NZV1 1036 aa8.22□□□□□ -1.09
CDC27-219ENST00000576484 ACTL7BQ9Y614 415 aa8.22□□□□□ -1.09
CDC27-219ENST00000576484 FAM221AA4D161 298 aa8.21□□□□□ -1.1
CDC27-219ENST00000576484 DCDC2CA8MYV0 355 aa8.21□□□□□ -1.1
CDC27-219ENST00000576484 GAS2O43903 313 aaKnown RBP8.21□□□□□ -1.1
CDC27-219ENST00000576484 SLFN14P0C7P3 912 aa8.21□□□□□ -1.1
CDC27-219ENST00000576484 ERCC5P28715 1186 aaPredicted RBP8.21□□□□□ -1.1
CDC27-219ENST00000576484 PRSS36Q5K4E3 855 aa8.21□□□□□ -1.1
CDC27-219ENST00000576484 PRR23CQ6ZRP0 262 aa8.21□□□□□ -1.1
CDC27-219ENST00000576484 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.21□□□□□ -1.1
CDC27-219ENST00000576484 CCDC84Q86UT8 332 aaPredicted RBP8.21□□□□□ -1.1
CDC27-219ENST00000576484 ARMC10Q8N2F6 343 aa8.21□□□□□ -1.1
CDC27-219ENST00000576484 ZNF296Q8WUU4 475 aaPredicted RBP8.21□□□□□ -1.1
CDC27-219ENST00000576484 PLPPR2Q96GM1 343 aa8.21□□□□□ -1.1
CDC27-219ENST00000576484 KCNF1Q9H3M0 494 aa8.21□□□□□ -1.1
CDC27-219ENST00000576484 CSADQ9Y600 493 aa8.21□□□□□ -1.1
CDC27-219ENST00000576484 DHX15O43143 795 aaKnown RBP8.2□□□□□ -1.1
CDC27-219ENST00000576484 UVSSAQ2YD98 709 aa8.2□□□□□ -1.1
CDC27-219ENST00000576484 WIPI1Q5MNZ9 446 aaPredicted RBP8.2□□□□□ -1.1
CDC27-219ENST00000576484 DYMQ7RTS9 669 aa8.2□□□□□ -1.1
CDC27-219ENST00000576484 ZNF654Q8IZM8 581 aa8.2□□□□□ -1.1
CDC27-219ENST00000576484 GATAD2BQ8WXI9 593 aa8.2□□□□□ -1.1
CDC27-219ENST00000576484 FANCD2OSQ96PS1 177 aa8.2□□□□□ -1.1
CDC27-219ENST00000576484 TGIF2Q9GZN2 237 aa8.2□□□□□ -1.1
CDC27-219ENST00000576484 GSX1Q9H4S2 264 aaPredicted RBP8.2□□□□□ -1.1
CDC27-219ENST00000576484 FAM105AQ9NUU6 356 aa8.2□□□□□ -1.1
CDC27-219ENST00000576484 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.2□□□□□ -1.1
CDC27-219ENST00000576484 SUPT16HQ9Y5B9 1047 aaKnown RBP8.2□□□□□ -1.1
CDC27-219ENST00000576484 GREM1O60565 184 aa8.19□□□□□ -1.1
CDC27-219ENST00000576484 CILPO75339 1184 aa8.19□□□□□ -1.1
CDC27-219ENST00000576484 BMP3P12645 472 aa8.19□□□□□ -1.1
CDC27-219ENST00000576484 ITGB7P26010 798 aa8.19□□□□□ -1.1
CDC27-219ENST00000576484 ERVK-24P63145 666 aa8.19□□□□□ -1.1
CDC27-219ENST00000576484 FAM196AQ6ZSG2 479 aa8.19□□□□□ -1.1
CDC27-219ENST00000576484 C12orf40Q86WS4 652 aa8.19□□□□□ -1.1
CDC27-219ENST00000576484 KIAA0825Q8IV33 1275 aa8.19□□□□□ -1.1
CDC27-219ENST00000576484 FBXO27Q8NI29 283 aa8.19□□□□□ -1.1
CDC27-219ENST00000576484 MYRFLQ96LU7 910 aa8.19□□□□□ -1.1
CDC27-219ENST00000576484 SPON2Q9BUD6 331 aa8.19□□□□□ -1.1
CDC27-219ENST00000576484 DISC1Q9NRI5 854 aa8.19□□□□□ -1.1
CDC27-219ENST00000576484 STOML1Q9UBI4 398 aa8.19□□□□□ -1.1
CDC27-219ENST00000576484 RXRBP28702 533 aa8.18□□□□□ -1.1
CDC27-219ENST00000576484 CRKP46108 304 aa8.18□□□□□ -1.1
CDC27-219ENST00000576484 RPL6Q02878 288 aaKnown RBP8.18□□□□□ -1.1
CDC27-219ENST00000576484 SGO2Q562F6 1265 aa8.18□□□□□ -1.1
CDC27-219ENST00000576484 PPM1JQ5JR12 505 aa8.18□□□□□ -1.1
CDC27-219ENST00000576484 ELMO3Q96BJ8 720 aa8.18□□□□□ -1.1
CDC27-219ENST00000576484 EAF1Q96JC9 268 aaPredicted RBP8.18□□□□□ -1.1
CDC27-219ENST00000576484 ATXN3LQ9H3M9 355 aa8.18□□□□□ -1.1
CDC27-219ENST00000576484 ACBD3Q9H3P7 528 aa8.18□□□□□ -1.1
CDC27-219ENST00000576484 UBP1Q9NZI7 540 aa8.18□□□□□ -1.1
CDC27-219ENST00000576484 HIF3AQ9Y2N7 669 aa8.18□□□□□ -1.1
CDC27-219ENST00000576484 RAXQ9Y2V3 346 aa8.18□□□□□ -1.1
CDC27-219ENST00000576484 PRAMEF27A3QJZ7 478 aa8.17□□□□□ -1.1
CDC27-219ENST00000576484 GFRA2O00451 464 aa8.17□□□□□ -1.1
CDC27-219ENST00000576484 TLR3O15455 904 aaKnown RBP8.17□□□□□ -1.1
CDC27-219ENST00000576484 NEFMP07197 916 aa8.17□□□□□ -1.1
CDC27-219ENST00000576484 RAB6AP20340 208 aa8.17□□□□□ -1.1
CDC27-219ENST00000576484 NTF4P34130 210 aa8.17□□□□□ -1.1
CDC27-219ENST00000576484 ASPAP45381 313 aa8.17□□□□□ -1.1
CDC27-219ENST00000576484 USP11P51784 963 aa8.17□□□□□ -1.1
CDC27-219ENST00000576484 RING1Q06587 406 aa8.17□□□□□ -1.1
CDC27-219ENST00000576484 TTLL4Q14679 1199 aa8.17□□□□□ -1.1
CDC27-219ENST00000576484 CDPF1Q6NVV7 123 aa8.17□□□□□ -1.1
CDC27-219ENST00000576484 CYFIP1Q7L576 1253 aa8.17□□□□□ -1.1
CDC27-219ENST00000576484 CCSER2Q9H7U1 834 aa8.17□□□□□ -1.1
CDC27-219ENST00000576484 BPNT1O95861 308 aa8.16□□□□□ -1.1
CDC27-219ENST00000576484 HCLS1P14317 486 aaPredicted RBP8.16□□□□□ -1.1
CDC27-219ENST00000576484 PAK2Q13177 524 aa8.16□□□□□ -1.1
CDC27-219ENST00000576484 MPP2Q14168 576 aa8.16□□□□□ -1.1
CDC27-219ENST00000576484 HDXQ7Z353 690 aa8.16□□□□□ -1.1
CDC27-219ENST00000576484 FAM20CQ8IXL6 584 aa8.16□□□□□ -1.1
CDC27-219ENST00000576484 LRRC3Q9BY71 257 aa8.16□□□□□ -1.1
CDC27-219ENST00000576484 ACSS3Q9H6R3 686 aa8.16□□□□□ -1.1
CDC27-219ENST00000576484 SNCAIPQ9Y6H5 919 aa8.16□□□□□ -1.1
CDC27-219ENST00000576484 HMX2A2RU54 273 aa8.15□□□□□ -1.1
CDC27-219ENST00000576484 FSTP19883 344 aa8.15□□□□□ -1.1
CDC27-219ENST00000576484 TNNI2P48788 182 aa8.15□□□□□ -1.1
CDC27-219ENST00000576484 BEND4Q6ZU67 534 aa8.15□□□□□ -1.1
CDC27-219ENST00000576484 REC114Q7Z4M0 266 aa8.15□□□□□ -1.1
CDC27-219ENST00000576484 RNF214Q8ND24 703 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms