RNA–Protein interactions for RNA: ENST00000575909.1

TOM1L1-222, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-222ENST00000575909 SHISA8B8ZZ34 492 aa9.33□□□□□ -0.92
TOM1L1-222ENST00000575909 NID1P14543 1247 aa9.33□□□□□ -0.92
TOM1L1-222ENST00000575909 AMPD1P23109 780 aa9.33□□□□□ -0.92
TOM1L1-222ENST00000575909 PDE3AQ14432 1141 aa9.33□□□□□ -0.92
TOM1L1-222ENST00000575909 LRRFIP1Q32MZ4 808 aaKnown RBP9.33□□□□□ -0.92
TOM1L1-222ENST00000575909 WIPI1Q5MNZ9 446 aaPredicted RBP9.33□□□□□ -0.92
TOM1L1-222ENST00000575909 LRP10Q7Z4F1 713 aa9.33□□□□□ -0.92
TOM1L1-222ENST00000575909 DTWD1Q8N5C7 304 aa9.33□□□□□ -0.92
TOM1L1-222ENST00000575909 FAM169BQ8N8A8 192 aa9.33□□□□□ -0.92
TOM1L1-222ENST00000575909 ZNF862O60290 1169 aa9.32□□□□□ -0.92
TOM1L1-222ENST00000575909 GRIN3BO60391 1043 aa9.32□□□□□ -0.92
TOM1L1-222ENST00000575909 SELPP16109 830 aa9.32□□□□□ -0.92
TOM1L1-222ENST00000575909 NLRP12P59046 1061 aa9.32□□□□□ -0.92
TOM1L1-222ENST00000575909 KIF4BQ2VIQ3 1234 aa9.32□□□□□ -0.92
TOM1L1-222ENST00000575909 LSRQ86X29 649 aaPredicted RBP9.32□□□□□ -0.92
TOM1L1-222ENST00000575909 DMRTC2Q8IXT2 367 aaPredicted RBP9.32□□□□□ -0.92
TOM1L1-222ENST00000575909 GALNT11Q8NCW6 608 aa9.32□□□□□ -0.92
TOM1L1-222ENST00000575909 PLPPR2Q96GM1 343 aa9.32□□□□□ -0.92
TOM1L1-222ENST00000575909 USP26Q9BXU7 913 aa9.32□□□□□ -0.92
TOM1L1-222ENST00000575909 ACTR10Q9NZ32 417 aa9.32□□□□□ -0.92
TOM1L1-222ENST00000575909 TBX22Q9Y458 520 aa9.32□□□□□ -0.92
TOM1L1-222ENST00000575909 CD68P34810 354 aaPredicted RBP9.31□□□□□ -0.92
TOM1L1-222ENST00000575909 CDK8P49336 464 aa9.31□□□□□ -0.92
TOM1L1-222ENST00000575909 COL9A3Q14050 684 aaPredicted RBP9.31□□□□□ -0.92
TOM1L1-222ENST00000575909 MLECQ14165 292 aa9.31□□□□□ -0.92
TOM1L1-222ENST00000575909 INPP5AQ14642 412 aa9.31□□□□□ -0.92
TOM1L1-222ENST00000575909 LRFN4Q6PJG9 635 aa9.31□□□□□ -0.92
TOM1L1-222ENST00000575909 ELMO3Q96BJ8 720 aa9.31□□□□□ -0.92
TOM1L1-222ENST00000575909 SYNGAP1Q96PV0 1343 aa9.31□□□□□ -0.92
TOM1L1-222ENST00000575909 LOC100289279A0A1B0GTE1 492 aa9.3□□□□□ -0.92
TOM1L1-222ENST00000575909 CTSBP07858 339 aa9.3□□□□□ -0.92
TOM1L1-222ENST00000575909 SLFN14P0C7P3 912 aa9.3□□□□□ -0.92
TOM1L1-222ENST00000575909 LIG1P18858 919 aa9.3□□□□□ -0.92
TOM1L1-222ENST00000575909 CASP7P55210 303 aa9.3□□□□□ -0.92
TOM1L1-222ENST00000575909 C19orf47Q8N9M1 422 aaKnown RBP9.3□□□□□ -0.92
TOM1L1-222ENST00000575909 WDR89Q96FK6 387 aaPredicted RBP9.3□□□□□ -0.92
TOM1L1-222ENST00000575909 PUS7Q96PZ0 661 aaKnown RBP9.3□□□□□ -0.92
TOM1L1-222ENST00000575909 SRPK1Q96SB4 655 aaKnown RBP9.3□□□□□ -0.92
TOM1L1-222ENST00000575909 MEIS3P2A8K0S8 358 aa9.29□□□□□ -0.92
TOM1L1-222ENST00000575909 HTR3BO95264 441 aa9.29□□□□□ -0.92
TOM1L1-222ENST00000575909 CELA2BP08218 269 aaPredicted RBP9.29□□□□□ -0.92
TOM1L1-222ENST00000575909 PDE4BQ07343 736 aa9.29□□□□□ -0.92
TOM1L1-222ENST00000575909 CYFIP1Q7L576 1253 aa9.29□□□□□ -0.92
TOM1L1-222ENST00000575909 ADAM11O75078 769 aa9.28□□□□□ -0.92
TOM1L1-222ENST00000575909 DEAF1O75398 565 aaPredicted RBP9.28□□□□□ -0.92
TOM1L1-222ENST00000575909 DGKGP49619 791 aa9.28□□□□□ -0.92
TOM1L1-222ENST00000575909 ZC3H12AQ5D1E8 599 aaKnown RBP9.28□□□□□ -0.92
TOM1L1-222ENST00000575909 SDE2Q6IQ49 451 aa9.28□□□□□ -0.92
TOM1L1-222ENST00000575909 LYPD4Q6UWN0 246 aa9.28□□□□□ -0.92
TOM1L1-222ENST00000575909 DEPDC7Q96QD5 511 aa9.28□□□□□ -0.92
TOM1L1-222ENST00000575909 TM9SF2Q99805 663 aa9.28□□□□□ -0.92
TOM1L1-222ENST00000575909 SNTG2Q9NY99 539 aa9.28□□□□□ -0.92
TOM1L1-222ENST00000575909 DDX3YO15523 660 aaKnown RBP9.27□□□□□ -0.93
TOM1L1-222ENST00000575909 AOC2O75106 756 aa9.27□□□□□ -0.93
TOM1L1-222ENST00000575909 FXNQ16595 210 aa9.27□□□□□ -0.93
TOM1L1-222ENST00000575909 DDR2Q16832 855 aa9.27□□□□□ -0.93
TOM1L1-222ENST00000575909 FOXD4L6Q3SYB3 417 aaPredicted RBP9.27□□□□□ -0.93
TOM1L1-222ENST00000575909 FOXD4L3Q6VB84 417 aaPredicted RBP9.27□□□□□ -0.93
TOM1L1-222ENST00000575909 TMEM40Q8WWA1 233 aa9.27□□□□□ -0.93
TOM1L1-222ENST00000575909 WDR18Q9BV38 432 aa9.27□□□□□ -0.93
TOM1L1-222ENST00000575909 CCDC113Q9H0I3 377 aa9.27□□□□□ -0.93
TOM1L1-222ENST00000575909 GMIPQ9P107 970 aa9.27□□□□□ -0.93
TOM1L1-222ENST00000575909 MSRB2Q9Y3D2 182 aa9.27□□□□□ -0.93
TOM1L1-222ENST00000575909 DCDC2CA8MYV0 355 aa9.26□□□□□ -0.93
TOM1L1-222ENST00000575909 HMGB1P09429 215 aaKnown RBP9.26□□□□□ -0.93
TOM1L1-222ENST00000575909 PLCG1P19174 1290 aa9.26□□□□□ -0.93
TOM1L1-222ENST00000575909 RASA3Q14644 834 aa9.26□□□□□ -0.93
TOM1L1-222ENST00000575909 EXOSC6Q5RKV6 272 aaKnown RBP9.26□□□□□ -0.93
TOM1L1-222ENST00000575909 TMEM201Q5SNT2 666 aa9.26□□□□□ -0.93
TOM1L1-222ENST00000575909 TRAPPC3LQ5T215 181 aa9.26□□□□□ -0.93
TOM1L1-222ENST00000575909 TAB3Q8N5C8 712 aaPredicted RBP9.26□□□□□ -0.93
TOM1L1-222ENST00000575909 CELF2-AS1Q8N7Q2 184 aa9.26□□□□□ -0.93
TOM1L1-222ENST00000575909 RAD18Q9NS91 495 aa9.26□□□□□ -0.93
TOM1L1-222ENST00000575909 REV1Q9UBZ9 1251 aa9.26□□□□□ -0.93
TOM1L1-222ENST00000575909 ADAM30Q9UKF2 790 aa9.26□□□□□ -0.93
TOM1L1-222ENST00000575909 PCDHGC5Q9Y5F6 944 aa9.26□□□□□ -0.93
TOM1L1-222ENST00000575909 CORINQ9Y5Q5 1042 aa9.26□□□□□ -0.93
TOM1L1-222ENST00000575909 DLGAP3O95886 979 aa9.25□□□□□ -0.93
TOM1L1-222ENST00000575909 GUCY2CP25092 1073 aa9.25□□□□□ -0.93
TOM1L1-222ENST00000575909 PPP2R5EQ16537 467 aa9.25□□□□□ -0.93
TOM1L1-222ENST00000575909 JAZF1Q86VZ6 243 aa9.25□□□□□ -0.93
TOM1L1-222ENST00000575909 FBXO11Q86XK2 927 aa9.25□□□□□ -0.93
TOM1L1-222ENST00000575909 NLGN1Q8N2Q7 840 aa9.25□□□□□ -0.93
TOM1L1-222ENST00000575909 TNKS2Q9H2K2 1166 aa9.25□□□□□ -0.93
TOM1L1-222ENST00000575909 ENAMQ9NRM1 1142 aa9.25□□□□□ -0.93
TOM1L1-222ENST00000575909 KCNK4Q9NYG8 393 aa9.25□□□□□ -0.93
TOM1L1-222ENST00000575909 HOXB4P17483 251 aaPredicted RBP9.24□□□□□ -0.93
TOM1L1-222ENST00000575909 RAC1P63000 192 aa9.24□□□□□ -0.93
TOM1L1-222ENST00000575909 ERVK-24P63145 666 aa9.24□□□□□ -0.93
TOM1L1-222ENST00000575909 RING1Q06587 406 aa9.24□□□□□ -0.93
TOM1L1-222ENST00000575909 DUOXA2Q1HG44 320 aa9.24□□□□□ -0.93
TOM1L1-222ENST00000575909 LARP1BQ659C4 914 aaKnown RBP9.24□□□□□ -0.93
TOM1L1-222ENST00000575909 INTS3Q68E01 1043 aaKnown RBP9.24□□□□□ -0.93
TOM1L1-222ENST00000575909 RUFY4Q6ZNE9 571 aa9.24□□□□□ -0.93
TOM1L1-222ENST00000575909 C12orf40Q86WS4 652 aa9.24□□□□□ -0.93
TOM1L1-222ENST00000575909 ZSCAN1Q8NBB4 408 aa9.24□□□□□ -0.93
TOM1L1-222ENST00000575909 ANTXR1Q9H6X2 564 aa9.24□□□□□ -0.93
TOM1L1-222ENST00000575909 SLC12A7Q9Y666 1083 aa9.24□□□□□ -0.93
TOM1L1-222ENST00000575909 A0A1W2PQH9 124 aa9.23□□□□□ -0.93
TOM1L1-222ENST00000575909 PRAMEF27A3QJZ7 478 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms