RNA–Protein interactions for RNA: ENST00000575338.1

SMG6-217, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-217ENST00000575338 CRAMP1Q96RY5 1269 aa7.92□□□□□ -1.14
SMG6-217ENST00000575338 PPP1R9BQ96SB3 815 aa7.92□□□□□ -1.14
SMG6-217ENST00000575338 NUP62CLQ9H1M0 184 aa7.92□□□□□ -1.14
SMG6-217ENST00000575338 RBM28Q9NW13 759 aaKnown RBP7.92□□□□□ -1.14
SMG6-217ENST00000575338 RBM27Q9P2N5 1060 aaKnown RBP7.92□□□□□ -1.14
SMG6-217ENST00000575338 CDK5RAP2Q96SN8 1893 aa7.92□□□□□ -1.14
SMG6-217ENST00000575338 KDM4AO75164 1064 aa7.91□□□□□ -1.14
SMG6-217ENST00000575338 GADD45BO75293 160 aaPredicted RBP7.91□□□□□ -1.14
SMG6-217ENST00000575338 CTDNEP1O95476 244 aa7.91□□□□□ -1.14
SMG6-217ENST00000575338 GYS1P13807 737 aa7.91□□□□□ -1.14
SMG6-217ENST00000575338 TM4SF1P30408 202 aa7.91□□□□□ -1.14
SMG6-217ENST00000575338 KCNQ4P56696 695 aa7.91□□□□□ -1.14
SMG6-217ENST00000575338 RTN1Q16799 776 aa7.91□□□□□ -1.14
SMG6-217ENST00000575338 SBK1Q52WX2 424 aa7.91□□□□□ -1.14
SMG6-217ENST00000575338 PRR5LQ6MZQ0 368 aa7.91□□□□□ -1.14
SMG6-217ENST00000575338 GAS2L3Q86XJ1 694 aa7.91□□□□□ -1.14
SMG6-217ENST00000575338 IGDCC4Q8TDY8 1250 aa7.91□□□□□ -1.14
SMG6-217ENST00000575338 NSUN4Q96CB9 384 aaKnown RBP7.91□□□□□ -1.14
SMG6-217ENST00000575338 RIOK1Q9BRS2 568 aaKnown RBP7.91□□□□□ -1.14
SMG6-217ENST00000575338 TNMDQ9H2S6 317 aa7.91□□□□□ -1.14
SMG6-217ENST00000575338 LY9Q9HBG7 655 aa7.91□□□□□ -1.14
SMG6-217ENST00000575338 EPB41L4AQ9HCS5 686 aaPredicted RBP7.91□□□□□ -1.14
SMG6-217ENST00000575338 POLR3EQ9NVU0 708 aa7.91□□□□□ -1.14
SMG6-217ENST00000575338 PODXL2Q9NZ53 605 aa7.91□□□□□ -1.14
SMG6-217ENST00000575338 ZSWIM5Q9P217 1185 aa7.91□□□□□ -1.14
SMG6-217ENST00000575338 GGA1Q9UJY5 639 aa7.91□□□□□ -1.14
SMG6-217ENST00000575338 RCOR1Q9UKL0 485 aa7.91□□□□□ -1.14
SMG6-217ENST00000575338 BRPF3Q9ULD4 1205 aa7.91□□□□□ -1.14
SMG6-217ENST00000575338 SUGT1Q9Y2Z0 365 aa7.91□□□□□ -1.14
SMG6-217ENST00000575338 NEDD4P46934 1319 aa7.91□□□□□ -1.14
SMG6-217ENST00000575338 MYH1P12882 1939 aa7.91□□□□□ -1.14
SMG6-217ENST00000575338 COL1A1P02452 1464 aaPredicted RBP7.9□□□□□ -1.14
SMG6-217ENST00000575338 A0A1W2PQ27 194 aa7.9□□□□□ -1.14
SMG6-217ENST00000575338 A0A1W2PQ64 194 aa7.9□□□□□ -1.14
SMG6-217ENST00000575338 A0A1W2PQD8 194 aa7.9□□□□□ -1.14
SMG6-217ENST00000575338 MINDY4BA8MYZ0 360 aa7.9□□□□□ -1.14
SMG6-217ENST00000575338 ORC4O43929 436 aa7.9□□□□□ -1.14
SMG6-217ENST00000575338 KINO60870 393 aaKnown RBP7.9□□□□□ -1.14
SMG6-217ENST00000575338 DDAH1O94760 285 aa7.9□□□□□ -1.14
SMG6-217ENST00000575338 DEXIO95424 95 aa7.9□□□□□ -1.14
SMG6-217ENST00000575338 FGRP09769 529 aa7.9□□□□□ -1.14
SMG6-217ENST00000575338 IFNAR1P17181 557 aa7.9□□□□□ -1.14
SMG6-217ENST00000575338 ALDH1B1P30837 517 aa7.9□□□□□ -1.14
SMG6-217ENST00000575338 HOXA10P31260 410 aaPredicted RBP7.9□□□□□ -1.14
SMG6-217ENST00000575338 PDE6BP35913 854 aa7.9□□□□□ -1.14
SMG6-217ENST00000575338 MECOMQ03112 1051 aa7.9□□□□□ -1.14
SMG6-217ENST00000575338 CTDSPL2Q05D32 466 aa7.9□□□□□ -1.14
SMG6-217ENST00000575338 STK38Q15208 465 aa7.9□□□□□ -1.14
SMG6-217ENST00000575338 ZRSR1Q15695 479 aaKnown RBP7.9□□□□□ -1.14
SMG6-217ENST00000575338 TXNRD1Q16881 649 aa7.9□□□□□ -1.14
SMG6-217ENST00000575338 RRP12Q5JTH9 1297 aaKnown RBP7.9□□□□□ -1.14
SMG6-217ENST00000575338 SASS6Q6UVJ0 657 aa7.9□□□□□ -1.14
SMG6-217ENST00000575338 C3orf67Q6ZVT6 689 aa7.9□□□□□ -1.14
SMG6-217ENST00000575338 CYB5R4Q7L1T6 521 aa7.9□□□□□ -1.14
SMG6-217ENST00000575338 CATIPQ7Z7H3 387 aa7.9□□□□□ -1.14
SMG6-217ENST00000575338 MICU3Q86XE3 530 aa7.9□□□□□ -1.14
SMG6-217ENST00000575338 MIGA1Q8NAN2 632 aa7.9□□□□□ -1.14
SMG6-217ENST00000575338 CCDC34Q96HJ3 373 aa7.9□□□□□ -1.14
SMG6-217ENST00000575338 ALG1Q9BT22 464 aa7.9□□□□□ -1.14
SMG6-217ENST00000575338 RNF26Q9BY78 433 aaPredicted RBP7.9□□□□□ -1.14
SMG6-217ENST00000575338 NCOA5Q9HCD5 579 aaKnown RBP7.9□□□□□ -1.14
SMG6-217ENST00000575338 BRMS1Q9HCU9 246 aa7.9□□□□□ -1.14
SMG6-217ENST00000575338 RTEL1Q9NZ71 1219 aa7.9□□□□□ -1.14
SMG6-217ENST00000575338 RGS17Q9UGC6 210 aaPredicted RBP7.9□□□□□ -1.14
SMG6-217ENST00000575338 CEP131Q9UPN4 1083 aa7.9□□□□□ -1.14
SMG6-217ENST00000575338 HPS5Q9UPZ3 1129 aa7.9□□□□□ -1.14
SMG6-217ENST00000575338 ANKRD31Q8N7Z5 1873 aa7.89□□□□□ -1.15
SMG6-217ENST00000575338 LTBP1Q14766 1721 aa7.89□□□□□ -1.15
SMG6-217ENST00000575338 COL4A1P02462 1669 aa7.89□□□□□ -1.15
SMG6-217ENST00000575338 KLRG2A4D1S0 409 aaPredicted RBP7.89□□□□□ -1.15
SMG6-217ENST00000575338 SNAP23O00161 211 aa7.89□□□□□ -1.15
SMG6-217ENST00000575338 TRIM37O94972 964 aa7.89□□□□□ -1.15
SMG6-217ENST00000575338 FMNL1O95466 1100 aaPredicted RBP7.89□□□□□ -1.15
SMG6-217ENST00000575338 TPM3P06753 285 aa7.89□□□□□ -1.15
SMG6-217ENST00000575338 MSNP26038 577 aaKnown RBP7.89□□□□□ -1.15
SMG6-217ENST00000575338 KIF5BP33176 963 aa7.89□□□□□ -1.15
SMG6-217ENST00000575338 USP5P45974 858 aa7.89□□□□□ -1.15
SMG6-217ENST00000575338 PPP4CP60510 307 aa7.89□□□□□ -1.15
SMG6-217ENST00000575338 CHAF1AQ13111 956 aaPredicted RBP7.89□□□□□ -1.15
SMG6-217ENST00000575338 FAM182BQ5T319 152 aa7.89□□□□□ -1.15
SMG6-217ENST00000575338 IFIT1BQ5T764 474 aaKnown RBP7.89□□□□□ -1.15
SMG6-217ENST00000575338 ADALQ6DHV7 355 aa7.89□□□□□ -1.15
SMG6-217ENST00000575338 PTF1AQ7RTS3 328 aa7.89□□□□□ -1.15
SMG6-217ENST00000575338 ZNF654Q8IZM8 581 aa7.89□□□□□ -1.15
SMG6-217ENST00000575338 FAM177A1Q8N128 213 aaPredicted RBP7.89□□□□□ -1.15
SMG6-217ENST00000575338 TDRD7Q8NHU6 1098 aaKnown RBP7.89□□□□□ -1.15
SMG6-217ENST00000575338 MAP3K14Q99558 947 aa7.89□□□□□ -1.15
SMG6-217ENST00000575338 NBPF3Q9H094 633 aa7.89□□□□□ -1.15
SMG6-217ENST00000575338 RBSNQ9H1K0 784 aa7.89□□□□□ -1.15
SMG6-217ENST00000575338 CLSTN2Q9H4D0 955 aa7.89□□□□□ -1.15
SMG6-217ENST00000575338 LRRC4BQ9NT99 713 aa7.89□□□□□ -1.15
SMG6-217ENST00000575338 TFCP2L1Q9NZI6 479 aa7.89□□□□□ -1.15
SMG6-217ENST00000575338 CCDC39Q9UFE4 941 aa7.89□□□□□ -1.15
SMG6-217ENST00000575338 NSFL1CQ9UNZ2 370 aaKnown RBP7.89□□□□□ -1.15
SMG6-217ENST00000575338 IQSEC3Q9UPP2 1182 aaPredicted RBP7.89□□□□□ -1.15
SMG6-217ENST00000575338 TNS1Q9HBL0 1735 aaKnown RBP7.89□□□□□ -1.15
SMG6-217ENST00000575338 TNKSO95271 1327 aa7.88□□□□□ -1.15
SMG6-217ENST00000575338 IRS2Q9Y4H2 1338 aa7.88□□□□□ -1.15
SMG6-217ENST00000575338 A0A0G2JLW4 131 aa7.88□□□□□ -1.15
SMG6-217ENST00000575338 GOLGA6L6A8MZA4 724 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms