RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 SIGLEC1Q9BZZ2 1709 aa9.05□□□□□ -0.96
TOM1L1-220ENST00000575333 ADGBQ8N7X0 1667 aa9.05□□□□□ -0.96
TOM1L1-220ENST00000575333 KIF3BO15066 747 aa9.04□□□□□ -0.96
TOM1L1-220ENST00000575333 RNF40O75150 1001 aa9.04□□□□□ -0.96
TOM1L1-220ENST00000575333 SMNDC1O75940 238 aaKnown RBP eCLIP9.04□□□□□ -0.96
TOM1L1-220ENST00000575333 ZNF24P17028 368 aa9.04□□□□□ -0.96
TOM1L1-220ENST00000575333 ATP5JP18859 108 aa9.04□□□□□ -0.96
TOM1L1-220ENST00000575333 ACTN3Q08043 901 aaPredicted RBP9.04□□□□□ -0.96
TOM1L1-220ENST00000575333 PRPF4BQ13523 1007 aaKnown RBP9.04□□□□□ -0.96
TOM1L1-220ENST00000575333 SLC4A8Q2Y0W8 1093 aa9.04□□□□□ -0.96
TOM1L1-220ENST00000575333 LCE2DQ5TA82 110 aaPredicted RBP9.04□□□□□ -0.96
TOM1L1-220ENST00000575333 CCDC181Q5TID7 509 aa9.04□□□□□ -0.96
TOM1L1-220ENST00000575333 FOXD4L5Q5VV16 416 aaPredicted RBP9.04□□□□□ -0.96
TOM1L1-220ENST00000575333 PARP9Q8IXQ6 854 aa9.04□□□□□ -0.96
TOM1L1-220ENST00000575333 RNF168Q8IYW5 571 aaPredicted RBP9.04□□□□□ -0.96
TOM1L1-220ENST00000575333 LEO1Q8WVC0 666 aaPredicted RBP9.04□□□□□ -0.96
TOM1L1-220ENST00000575333 FOXD4L4Q8WXT5 416 aaPredicted RBP9.04□□□□□ -0.96
TOM1L1-220ENST00000575333 ARHGAP45Q92619 1136 aa9.04□□□□□ -0.96
TOM1L1-220ENST00000575333 ANKRD27Q96NW4 1050 aa9.04□□□□□ -0.96
TOM1L1-220ENST00000575333 FMNL2Q96PY5 1086 aa9.04□□□□□ -0.96
TOM1L1-220ENST00000575333 SPAG5Q96R06 1193 aa9.04□□□□□ -0.96
TOM1L1-220ENST00000575333 GORASP1Q9BQQ3 440 aa9.04□□□□□ -0.96
TOM1L1-220ENST00000575333 TNMDQ9H2S6 317 aa9.04□□□□□ -0.96
TOM1L1-220ENST00000575333 GDPD2Q9HCC8 539 aa9.04□□□□□ -0.96
TOM1L1-220ENST00000575333 PAPOLBQ9NRJ5 636 aaKnown RBP9.04□□□□□ -0.96
TOM1L1-220ENST00000575333 CNPY2Q9Y2B0 182 aa9.04□□□□□ -0.96
TOM1L1-220ENST00000575333 SSH2Q76I76 1423 aa9.04□□□□□ -0.96
TOM1L1-220ENST00000575333 ABCC11Q96J66 1382 aa9.04□□□□□ -0.96
TOM1L1-220ENST00000575333 A2MP01023 1474 aa9.03□□□□□ -0.96
TOM1L1-220ENST00000575333 ENO4A6NNW6 628 aa9.03□□□□□ -0.96
TOM1L1-220ENST00000575333 MYO1FO00160 1098 aa9.03□□□□□ -0.96
TOM1L1-220ENST00000575333 SFPQP23246 707 aaKnown RBP eCLIP9.03□□□□□ -0.96
TOM1L1-220ENST00000575333 EMP3P54852 163 aa9.03□□□□□ -0.96
TOM1L1-220ENST00000575333 PSMC1P62191 440 aaKnown RBP9.03□□□□□ -0.96
TOM1L1-220ENST00000575333 TMF1P82094 1093 aa9.03□□□□□ -0.96
TOM1L1-220ENST00000575333 CCDC15Q0P6D6 951 aa9.03□□□□□ -0.96
TOM1L1-220ENST00000575333 NEXNQ0ZGT2 675 aa9.03□□□□□ -0.96
TOM1L1-220ENST00000575333 VARS2Q5ST30 1063 aaKnown RBP9.03□□□□□ -0.96
TOM1L1-220ENST00000575333 CEP57Q86XR8 500 aa9.03□□□□□ -0.96
TOM1L1-220ENST00000575333 ITPRIPQ8IWB1 547 aa9.03□□□□□ -0.96
TOM1L1-220ENST00000575333 FAM76AQ8TAV0 307 aa9.03□□□□□ -0.96
TOM1L1-220ENST00000575333 CHAMP1Q96JM3 812 aa9.03□□□□□ -0.96
TOM1L1-220ENST00000575333 PRAM1Q96QH2 718 aa9.03□□□□□ -0.96
TOM1L1-220ENST00000575333 SLC39A2Q9NP94 309 aa9.03□□□□□ -0.96
TOM1L1-220ENST00000575333 SWAP70Q9UH65 585 aa9.03□□□□□ -0.96
TOM1L1-220ENST00000575333 HOOK1Q9UJC3 728 aaKnown RBP9.03□□□□□ -0.96
TOM1L1-220ENST00000575333 GMEB1Q9Y692 573 aa9.03□□□□□ -0.96
TOM1L1-220ENST00000575333 PPIP5K1Q6PFW1 1433 aa9.03□□□□□ -0.96
TOM1L1-220ENST00000575333 CDHR2Q9BYE9 1310 aa9.03□□□□□ -0.96
TOM1L1-220ENST00000575333 SRRM3A6NNA2 597 aaPredicted RBP9.03□□□□□ -0.96
TOM1L1-220ENST00000575333 EIF3HO15372 352 aaKnown RBP eCLIP9.03□□□□□ -0.96
TOM1L1-220ENST00000575333 CREB3O43889 395 aa9.03□□□□□ -0.96
TOM1L1-220ENST00000575333 KIF5CO60282 957 aa9.03□□□□□ -0.96
TOM1L1-220ENST00000575333 F13A1P00488 732 aa9.03□□□□□ -0.96
TOM1L1-220ENST00000575333 CASP8Q14790 479 aa9.03□□□□□ -0.96
TOM1L1-220ENST00000575333 TAF7Q15545 349 aaPredicted RBP9.03□□□□□ -0.96
TOM1L1-220ENST00000575333 KBTBD12Q3ZCT8 623 aa9.03□□□□□ -0.96
TOM1L1-220ENST00000575333 NUTM2GQ5VZR2 741 aa9.03□□□□□ -0.96
TOM1L1-220ENST00000575333 CRELD2Q6UXH1 353 aaPredicted RBP9.03□□□□□ -0.96
TOM1L1-220ENST00000575333 ATF7IPQ6VMQ6 1270 aa9.03□□□□□ -0.96
TOM1L1-220ENST00000575333 MPHOSPH6Q99547 160 aaKnown RBP9.03□□□□□ -0.96
TOM1L1-220ENST00000575333 TSC22D3Q99576 134 aa9.03□□□□□ -0.96
TOM1L1-220ENST00000575333 MOV10L1Q9BXT6 1211 aaKnown RBP9.03□□□□□ -0.96
TOM1L1-220ENST00000575333 FAM135BQ49AJ0 1406 aa9.02□□□□□ -0.97
TOM1L1-220ENST00000575333 RNF8O76064 485 aa9.02□□□□□ -0.97
TOM1L1-220ENST00000575333 PRPF6O94906 941 aaKnown RBP9.02□□□□□ -0.97
TOM1L1-220ENST00000575333 DESP17661 470 aa9.02□□□□□ -0.97
TOM1L1-220ENST00000575333 COL9A1P20849 921 aa9.02□□□□□ -0.97
TOM1L1-220ENST00000575333 ZBED6P86452 979 aa9.02□□□□□ -0.97
TOM1L1-220ENST00000575333 IFT88Q13099 833 aa9.02□□□□□ -0.97
TOM1L1-220ENST00000575333 PABPC4Q13310 644 aaKnown RBP eCLIP9.02□□□□□ -0.97
TOM1L1-220ENST00000575333 TTC22Q5TAA0 569 aa9.02□□□□□ -0.97
TOM1L1-220ENST00000575333 NUGGCQ68CJ6 796 aa9.02□□□□□ -0.97
TOM1L1-220ENST00000575333 BCAS4Q8TDM0 211 aa9.02□□□□□ -0.97
TOM1L1-220ENST00000575333 P3H4Q92791 437 aa9.02□□□□□ -0.97
TOM1L1-220ENST00000575333 CUL5Q93034 780 aa9.02□□□□□ -0.97
TOM1L1-220ENST00000575333 CLIC6Q96NY7 704 aa9.02□□□□□ -0.97
TOM1L1-220ENST00000575333 MTA3Q9BTC8 594 aa9.02□□□□□ -0.97
TOM1L1-220ENST00000575333 YIPF2Q9BWQ6 316 aa9.02□□□□□ -0.97
TOM1L1-220ENST00000575333 CLSTN2Q9H4D0 955 aa9.02□□□□□ -0.97
TOM1L1-220ENST00000575333 SPATA7Q9P0W8 599 aa9.02□□□□□ -0.97
TOM1L1-220ENST00000575333 ATP8A1Q9Y2Q0 1164 aa9.02□□□□□ -0.97
TOM1L1-220ENST00000575333 F8VZ95 297 aa9.01□□□□□ -0.97
TOM1L1-220ENST00000575333 CEP104O60308 925 aa9.01□□□□□ -0.97
TOM1L1-220ENST00000575333 HARSP12081 509 aaKnown RBP9.01□□□□□ -0.97
TOM1L1-220ENST00000575333 IRAK1P51617 712 aa9.01□□□□□ -0.97
TOM1L1-220ENST00000575333 PSMD7P51665 324 aa9.01□□□□□ -0.97
TOM1L1-220ENST00000575333 NEK4P51957 841 aa9.01□□□□□ -0.97
TOM1L1-220ENST00000575333 CCDC92Q53HC0 331 aaPredicted RBP9.01□□□□□ -0.97
TOM1L1-220ENST00000575333 SFMBT2Q5VUG0 894 aa9.01□□□□□ -0.97
TOM1L1-220ENST00000575333 TRIM65Q6PJ69 517 aa9.01□□□□□ -0.97
TOM1L1-220ENST00000575333 BZW1Q7L1Q6 419 aaKnown RBP9.01□□□□□ -0.97
TOM1L1-220ENST00000575333 IQCF2Q8IXL9 164 aa9.01□□□□□ -0.97
TOM1L1-220ENST00000575333 PPP1R14BQ96C90 147 aa9.01□□□□□ -0.97
TOM1L1-220ENST00000575333 ACSBG1Q96GR2 724 aa9.01□□□□□ -0.97
TOM1L1-220ENST00000575333 EBF2Q9HAK2 575 aa9.01□□□□□ -0.97
TOM1L1-220ENST00000575333 SLC40A1Q9NP59 571 aa9.01□□□□□ -0.97
TOM1L1-220ENST00000575333 TMEM98Q9Y2Y6 226 aa9.01□□□□□ -0.97
TOM1L1-220ENST00000575333 FAM205CA6NFA0 338 aa9.01□□□□□ -0.97
TOM1L1-220ENST00000575333 STX6O43752 255 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms