RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 OS9Q13438 667 aaPredicted RBP12.96□□□□□ -0.33
LITAF-216ENST00000574848 CNKSR2Q8WXI2 1034 aa12.96□□□□□ -0.33
LITAF-216ENST00000574848 BRI3BPQ8WY22 251 aa12.96□□□□□ -0.33
LITAF-216ENST00000574848 PTPN18Q99952 460 aa12.96□□□□□ -0.33
LITAF-216ENST00000574848 R3HDMLQ9H3Y0 253 aa12.96□□□□□ -0.33
LITAF-216ENST00000574848 ZCCHC17Q9NP64 241 aaKnown RBP12.96□□□□□ -0.33
LITAF-216ENST00000574848 ZBTB40Q9NUA8 1239 aa12.96□□□□□ -0.33
LITAF-216ENST00000574848 DBNLQ9UJU6 430 aaKnown RBP12.96□□□□□ -0.33
LITAF-216ENST00000574848 MYO5AQ9Y4I1 1855 aaKnown RBP12.95□□□□□ -0.34
LITAF-216ENST00000574848 FKTNO75072 461 aa12.95□□□□□ -0.34
LITAF-216ENST00000574848 PPIL2Q13356 520 aa12.95□□□□□ -0.34
LITAF-216ENST00000574848 PKN2Q16513 984 aaKnown RBP12.95□□□□□ -0.34
LITAF-216ENST00000574848 CCDC158Q5M9N0 1113 aa12.95□□□□□ -0.34
LITAF-216ENST00000574848 OTUD7BQ6GQQ9 843 aa12.95□□□□□ -0.34
LITAF-216ENST00000574848 ERC1Q8IUD2 1116 aa12.95□□□□□ -0.34
LITAF-216ENST00000574848 OTUD5Q96G74 571 aa12.95□□□□□ -0.34
LITAF-216ENST00000574848 DDX4Q9NQI0 724 aaKnown RBP12.95□□□□□ -0.34
LITAF-216ENST00000574848 COG6Q9Y2V7 657 aa12.95□□□□□ -0.34
LITAF-216ENST00000574848 AK9Q5TCS8 1911 aa12.95□□□□□ -0.34
LITAF-216ENST00000574848 SIPA1L1O43166 1804 aa12.95□□□□□ -0.34
LITAF-216ENST00000574848 HTTP42858 3142 aa12.94□□□□□ -0.34
LITAF-216ENST00000574848 CCL15-CCL14A0A0B4J2E2 113 aa12.94□□□□□ -0.34
LITAF-216ENST00000574848 LDHCP07864 332 aa12.94□□□□□ -0.34
LITAF-216ENST00000574848 INPP5BP32019 993 aa12.94□□□□□ -0.34
LITAF-216ENST00000574848 PPATQ06203 517 aa12.94□□□□□ -0.34
LITAF-216ENST00000574848 CRHR2Q13324 411 aa12.94□□□□□ -0.34
LITAF-216ENST00000574848 CCL15Q16663 113 aa12.94□□□□□ -0.34
LITAF-216ENST00000574848 HSP90AB4PQ58FF6 505 aa12.94□□□□□ -0.34
LITAF-216ENST00000574848 TTC39AQ5SRH9 613 aa12.94□□□□□ -0.34
LITAF-216ENST00000574848 TBC1D9Q6ZT07 1266 aa12.94□□□□□ -0.34
LITAF-216ENST00000574848 SH3BP5LQ7L8J4 393 aa12.94□□□□□ -0.34
LITAF-216ENST00000574848 ZFPM1Q8IX07 1006 aa12.94□□□□□ -0.34
LITAF-216ENST00000574848 RPAP2Q8IXW5 612 aaPredicted RBP12.94□□□□□ -0.34
LITAF-216ENST00000574848 ZKSCAN4Q969J2 545 aaPredicted RBP12.94□□□□□ -0.34
LITAF-216ENST00000574848 EAF2Q96CJ1 260 aaPredicted RBP12.94□□□□□ -0.34
LITAF-216ENST00000574848 TLR7Q9NYK1 1049 aaKnown RBP12.94□□□□□ -0.34
LITAF-216ENST00000574848 PHIPQ8WWQ0 1821 aa12.94□□□□□ -0.34
LITAF-216ENST00000574848 PTPRFP10586 1907 aa12.94□□□□□ -0.34
LITAF-216ENST00000574848 PHF20L1A8MW92 1017 aa12.93□□□□□ -0.34
LITAF-216ENST00000574848 IRF6O14896 467 aa12.93□□□□□ -0.34
LITAF-216ENST00000574848 CYP2E1P05181 493 aaPredicted RBP12.93□□□□□ -0.34
LITAF-216ENST00000574848 CETPP11597 493 aa12.93□□□□□ -0.34
LITAF-216ENST00000574848 RGS19P49795 217 aa12.93□□□□□ -0.34
LITAF-216ENST00000574848 SNAPC2Q13487 334 aa12.93□□□□□ -0.34
LITAF-216ENST00000574848 MIGA2Q7L4E1 593 aa12.93□□□□□ -0.34
LITAF-216ENST00000574848 RAI14Q9P0K7 980 aa12.93□□□□□ -0.34
LITAF-216ENST00000574848 KCNH4Q9UQ05 1017 aa12.93□□□□□ -0.34
LITAF-216ENST00000574848 EXOC6BQ9Y2D4 811 aa12.93□□□□□ -0.34
LITAF-216ENST00000574848 DDTLA6NHG4 134 aaPredicted RBP12.92□□□□□ -0.34
LITAF-216ENST00000574848 DDX60LQ5H9U9 1706 aaKnown RBP12.92□□□□□ -0.34
LITAF-216ENST00000574848 TMED8Q6PL24 325 aaPredicted RBP12.92□□□□□ -0.34
LITAF-216ENST00000574848 SIRT2Q8IXJ6 389 aa12.92□□□□□ -0.34
LITAF-216ENST00000574848 FAM43AQ8N2R8 423 aa12.92□□□□□ -0.34
LITAF-216ENST00000574848 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.92□□□□□ -0.34
LITAF-216ENST00000574848 LRP2BPQ9P2M1 347 aa12.92□□□□□ -0.34
LITAF-216ENST00000574848 ATAD5Q96QE3 1844 aa12.92□□□□□ -0.34
LITAF-216ENST00000574848 CCDC85CA6NKD9 419 aa12.91□□□□□ -0.34
LITAF-216ENST00000574848 TBC1D12O60347 775 aa12.91□□□□□ -0.34
LITAF-216ENST00000574848 HMMRO75330 724 aa12.91□□□□□ -0.34
LITAF-216ENST00000574848 ZAP70P43403 619 aa12.91□□□□□ -0.34
LITAF-216ENST00000574848 PPP4CP60510 307 aa12.91□□□□□ -0.34
LITAF-216ENST00000574848 FBXO46Q6PJ61 603 aaPredicted RBP12.91□□□□□ -0.34
LITAF-216ENST00000574848 SCYL3Q8IZE3 742 aa12.91□□□□□ -0.34
LITAF-216ENST00000574848 RHPN1Q8TCX5 695 aa12.91□□□□□ -0.34
LITAF-216ENST00000574848 OSBPL5Q9H0X9 879 aaPredicted RBP12.91□□□□□ -0.34
LITAF-216ENST00000574848 SNRKQ9NRH2 765 aa12.91□□□□□ -0.34
LITAF-216ENST00000574848 HPS5Q9UPZ3 1129 aa12.91□□□□□ -0.34
LITAF-216ENST00000574848 LOC285556D6RIA3 1793 aa12.9□□□□□ -0.34
LITAF-216ENST00000574848 RBBP6Q7Z6E9 1792 aaKnown RBP12.9□□□□□ -0.34
LITAF-216ENST00000574848 PLCG2P16885 1265 aa12.9□□□□□ -0.34
LITAF-216ENST00000574848 PICALMQ13492 652 aa12.9□□□□□ -0.34
LITAF-216ENST00000574848 MOGSQ13724 837 aa12.9□□□□□ -0.34
LITAF-216ENST00000574848 TAF1CQ15572 869 aaPredicted RBP12.9□□□□□ -0.34
LITAF-216ENST00000574848 NAA16Q6N069 864 aaPredicted RBP12.9□□□□□ -0.34
LITAF-216ENST00000574848 ADGRA1Q86SQ6 560 aa12.9□□□□□ -0.34
LITAF-216ENST00000574848 KIF1BPQ96EK5 621 aa12.9□□□□□ -0.34
LITAF-216ENST00000574848 ERO1AQ96HE7 468 aa12.9□□□□□ -0.34
LITAF-216ENST00000574848 CCDC8Q9H0W5 538 aaPredicted RBP12.9□□□□□ -0.34
LITAF-216ENST00000574848 RWDD1Q9H446 243 aaPredicted RBP12.9□□□□□ -0.34
LITAF-216ENST00000574848 PIH1D3Q9NQM4 214 aaKnown RBP12.9□□□□□ -0.34
LITAF-216ENST00000574848 BTBD19C9JJ37 291 aa12.89□□□□□ -0.35
LITAF-216ENST00000574848 CTNND1O60716 968 aaKnown RBP12.89□□□□□ -0.35
LITAF-216ENST00000574848 BAG3O95817 575 aa12.89□□□□□ -0.35
LITAF-216ENST00000574848 OTOP1Q7RTM1 612 aa12.89□□□□□ -0.35
LITAF-216ENST00000574848 ANKRD23Q86SG2 305 aa12.89□□□□□ -0.35
LITAF-216ENST00000574848 AACSQ86V21 672 aa12.89□□□□□ -0.35
LITAF-216ENST00000574848 ZSCAN29Q8IWY8 852 aaPredicted RBP12.89□□□□□ -0.35
LITAF-216ENST00000574848 TEX11Q8IYF3 940 aa12.89□□□□□ -0.35
LITAF-216ENST00000574848 SH3RF3Q8TEJ3 882 aaPredicted RBP12.89□□□□□ -0.35
LITAF-216ENST00000574848 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.89□□□□□ -0.35
LITAF-216ENST00000574848 ZFYVE28Q9HCC9 887 aa12.89□□□□□ -0.35
LITAF-216ENST00000574848 ADGRA2Q96PE1 1338 aa12.88□□□□□ -0.35
LITAF-216ENST00000574848 CXCL11O14625 94 aa12.88□□□□□ -0.35
LITAF-216ENST00000574848 TLR2O60603 784 aa12.88□□□□□ -0.35
LITAF-216ENST00000574848 RAB11FIP3O75154 756 aa12.88□□□□□ -0.35
LITAF-216ENST00000574848 PTPRAP18433 802 aa12.88□□□□□ -0.35
LITAF-216ENST00000574848 SP3Q02447 781 aa12.88□□□□□ -0.35
LITAF-216ENST00000574848 CERS3Q8IU89 383 aa12.88□□□□□ -0.35
LITAF-216ENST00000574848 NOL10Q9BSC4 688 aaKnown RBP12.88□□□□□ -0.35
LITAF-216ENST00000574848 FLT1P17948 1338 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms