RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, human

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPLOC4-215	ENST00000574095	CRHR2	Q13324	411 aa		31.95	■■■□□ 2.71
NPLOC4-215	ENST00000574095	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	31.95	■■■□□ 2.71
NPLOC4-215	ENST00000574095	DOCK2	Q92608	1830 aa		31.95	■■■□□ 2.7
NPLOC4-215	ENST00000574095	ZBTB40	Q9NUA8	1239 aa		31.94	■■■□□ 2.7
NPLOC4-215	ENST00000574095	MYO5A	Q9Y4I1	1855 aa	Known RBP	31.93	■■■□□ 2.7
NPLOC4-215	ENST00000574095	DDTL	A6NHG4	134 aa	Predicted RBP	31.93	■■■□□ 2.7
NPLOC4-215	ENST00000574095	IRF6	O14896	467 aa		31.93	■■■□□ 2.7
NPLOC4-215	ENST00000574095	CYP2E1	P05181	493 aa	Predicted RBP	31.93	■■■□□ 2.7
NPLOC4-215	ENST00000574095	ZNF512B	Q96KM6	892 aa	Predicted RBP	31.93	■■■□□ 2.7
NPLOC4-215	ENST00000574095	ZAP70	P43403	619 aa		31.92	■■■□□ 2.7
NPLOC4-215	ENST00000574095	PPIL2	Q13356	520 aa		31.92	■■■□□ 2.7
NPLOC4-215	ENST00000574095	ERC1	Q8IUD2	1116 aa		31.92	■■■□□ 2.7
NPLOC4-215	ENST00000574095	RPAP2	Q8IXW5	612 aa	Predicted RBP	31.92	■■■□□ 2.7
NPLOC4-215	ENST00000574095	SLURP2	P0DP57	97 aa		31.91	■■■□□ 2.7
NPLOC4-215	ENST00000574095	PPAT	Q06203	517 aa		31.91	■■■□□ 2.7
NPLOC4-215	ENST00000574095	FAM43A	Q8N2R8	423 aa		31.91	■■■□□ 2.7
NPLOC4-215	ENST00000574095	ATRNL1	Q5VV63	1379 aa		31.91	■■■□□ 2.7
NPLOC4-215	ENST00000574095	C20orf194	Q5TEA3	1177 aa		31.9	■■■□□ 2.7
NPLOC4-215	ENST00000574095	NAA16	Q6N069	864 aa	Predicted RBP	31.9	■■■□□ 2.7
NPLOC4-215	ENST00000574095	SIRT2	Q8IXJ6	389 aa		31.9	■■■□□ 2.7
NPLOC4-215	ENST00000574095	CETP	P11597	493 aa		31.89	■■■□□ 2.7
NPLOC4-215	ENST00000574095	SNAPC2	Q13487	334 aa		31.89	■■■□□ 2.7
NPLOC4-215	ENST00000574095	PKN2	Q16513	984 aa	Known RBP	31.89	■■■□□ 2.7
NPLOC4-215	ENST00000574095	AACS	Q86V21	672 aa		31.89	■■■□□ 2.7
NPLOC4-215	ENST00000574095	IL1RAPL2	Q9NP60	686 aa		31.89	■■■□□ 2.7
NPLOC4-215	ENST00000574095	HSP90AB4P	Q58FF6	505 aa		31.88	■■■□□ 2.69
NPLOC4-215	ENST00000574095	NOL9	Q5SY16	702 aa	Known RBP	31.88	■■■□□ 2.69
NPLOC4-215	ENST00000574095	RHPN1	Q8TCX5	695 aa		31.88	■■■□□ 2.69
NPLOC4-215	ENST00000574095	PIH1D3	Q9NQM4	214 aa	Known RBP	31.88	■■■□□ 2.69
NPLOC4-215	ENST00000574095	PHF20L1	A8MW92	1017 aa		31.87	■■■□□ 2.69
NPLOC4-215	ENST00000574095	APBB1	O00213	710 aa		31.87	■■■□□ 2.69
NPLOC4-215	ENST00000574095	MAP4K4	O95819	1239 aa	Predicted RBP	31.87	■■■□□ 2.69
NPLOC4-215	ENST00000574095	TAF1C	Q15572	869 aa	Predicted RBP	31.87	■■■□□ 2.69
NPLOC4-215	ENST00000574095	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	31.87	■■■□□ 2.69
NPLOC4-215	ENST00000574095	NOL10	Q9BSC4	688 aa	Known RBP	31.87	■■■□□ 2.69
NPLOC4-215	ENST00000574095	MAST2	Q6P0Q8	1798 aa		31.86	■■■□□ 2.69
NPLOC4-215	ENST00000574095	HMMR	O75330	724 aa		31.86	■■■□□ 2.69
NPLOC4-215	ENST00000574095	NPM3	O75607	178 aa	Known RBP	31.86	■■■□□ 2.69
NPLOC4-215	ENST00000574095	MAP3K10	Q02779	954 aa		31.86	■■■□□ 2.69
NPLOC4-215	ENST00000574095	TEX11	Q8IYF3	940 aa		31.86	■■■□□ 2.69
NPLOC4-215	ENST00000574095	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	31.86	■■■□□ 2.69
NPLOC4-215	ENST00000574095	CHMP4B	Q9H444	224 aa	Known RBP	31.86	■■■□□ 2.69
NPLOC4-215	ENST00000574095	ZFYVE28	Q9HCC9	887 aa		31.86	■■■□□ 2.69
NPLOC4-215	ENST00000574095	AATF	Q9NY61	560 aa	Known RBP eCLIP	31.86	■■■□□ 2.69
NPLOC4-215	ENST00000574095	HPS5	Q9UPZ3	1129 aa		31.86	■■■□□ 2.69
NPLOC4-215	ENST00000574095	BTBD19	C9JJ37	291 aa		31.85	■■■□□ 2.69
NPLOC4-215	ENST00000574095	NDUFB9	Q9Y6M9	179 aa		31.85	■■■□□ 2.69
NPLOC4-215	ENST00000574095	PDE3A	Q14432	1141 aa		31.84	■■■□□ 2.69
NPLOC4-215	ENST00000574095	ADGRA1	Q86SQ6	560 aa		31.84	■■■□□ 2.69
NPLOC4-215	ENST00000574095	CD99L2	Q8TCZ2	262 aa		31.84	■■■□□ 2.69
NPLOC4-215	ENST00000574095	TRIM17	Q9Y577	477 aa		31.84	■■■□□ 2.69
NPLOC4-215	ENST00000574095	BAG3	O95817	575 aa		31.83	■■■□□ 2.69
NPLOC4-215	ENST00000574095	SP3	Q02447	781 aa		31.83	■■■□□ 2.69
NPLOC4-215	ENST00000574095	FBXO46	Q6PJ61	603 aa	Predicted RBP	31.83	■■■□□ 2.69
NPLOC4-215	ENST00000574095	SCYL3	Q8IZE3	742 aa		31.83	■■■□□ 2.69
NPLOC4-215	ENST00000574095	OSBPL5	Q9H0X9	879 aa	Predicted RBP	31.83	■■■□□ 2.69
NPLOC4-215	ENST00000574095	BCL11A	Q9H165	835 aa		31.83	■■■□□ 2.69
NPLOC4-215	ENST00000574095	KCNH4	Q9UQ05	1017 aa		31.83	■■■□□ 2.69
NPLOC4-215	ENST00000574095	KIF1BP	Q96EK5	621 aa		31.82	■■■□□ 2.68
NPLOC4-215	ENST00000574095	ERO1A	Q96HE7	468 aa		31.82	■■■□□ 2.68
NPLOC4-215	ENST00000574095	FAM196B	A6NMK8	535 aa		31.81	■■■□□ 2.68
NPLOC4-215	ENST00000574095	PPP4C	P60510	307 aa		31.81	■■■□□ 2.68
NPLOC4-215	ENST00000574095	OTOP1	Q7RTM1	612 aa		31.81	■■■□□ 2.68
NPLOC4-215	ENST00000574095	ANTXR1	Q9H6X2	564 aa		31.81	■■■□□ 2.68
NPLOC4-215	ENST00000574095	IDH1	O75874	414 aa	Known RBP	31.8	■■■□□ 2.68
NPLOC4-215	ENST00000574095	RGS19	P49795	217 aa		31.8	■■■□□ 2.68
NPLOC4-215	ENST00000574095	CLASRP	Q8N2M8	674 aa	Known RBP	31.8	■■■□□ 2.68
NPLOC4-215	ENST00000574095	PICK1	Q9NRD5	415 aa		31.8	■■■□□ 2.68
NPLOC4-215	ENST00000574095	ZHX2	Q9Y6X8	837 aa		31.8	■■■□□ 2.68
NPLOC4-215	ENST00000574095	TBC1D12	O60347	775 aa		31.79	■■■□□ 2.68
NPLOC4-215	ENST00000574095	CYP7A1	P22680	504 aa		31.79	■■■□□ 2.68
NPLOC4-215	ENST00000574095	CAP1	Q01518	475 aa		31.79	■■■□□ 2.68
NPLOC4-215	ENST00000574095	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	31.79	■■■□□ 2.68
NPLOC4-215	ENST00000574095	ZCCHC17	Q9NP64	241 aa	Known RBP	31.79	■■■□□ 2.68
NPLOC4-215	ENST00000574095	CDK5RAP2	Q96SN8	1893 aa		31.78	■■■□□ 2.68
NPLOC4-215	ENST00000574095	CTNND1	O60716	968 aa	Known RBP	31.78	■■■□□ 2.68
NPLOC4-215	ENST00000574095	IGSF3	O75054	1194 aa		31.78	■■■□□ 2.68
NPLOC4-215	ENST00000574095	PLCG2	P16885	1265 aa		31.78	■■■□□ 2.68
NPLOC4-215	ENST00000574095	PTPRA	P18433	802 aa		31.78	■■■□□ 2.68
NPLOC4-215	ENST00000574095	SOX10	P56693	466 aa		31.78	■■■□□ 2.68
NPLOC4-215	ENST00000574095	TGFBRAP1	Q8WUH2	860 aa		31.78	■■■□□ 2.68
NPLOC4-215	ENST00000574095	DOCK1	Q14185	1865 aa		31.78	■■■□□ 2.68
NPLOC4-215	ENST00000574095	COL2A1	P02458	1487 aa	Predicted RBP	31.78	■■■□□ 2.68
NPLOC4-215	ENST00000574095	DYNLL1	P63167	89 aa	Known RBP	31.77	■■■□□ 2.68
NPLOC4-215	ENST00000574095	MOGS	Q13724	837 aa		31.77	■■■□□ 2.68
NPLOC4-215	ENST00000574095	CXCL11	O14625	94 aa		31.76	■■■□□ 2.67
NPLOC4-215	ENST00000574095	TLR2	O60603	784 aa		31.76	■■■□□ 2.67
NPLOC4-215	ENST00000574095	RAB11FIP3	O75154	756 aa		31.76	■■■□□ 2.67
NPLOC4-215	ENST00000574095	ANKRD23	Q86SG2	305 aa		31.76	■■■□□ 2.67
NPLOC4-215	ENST00000574095	MAPKAPK5	Q8IW41	473 aa		31.76	■■■□□ 2.67
NPLOC4-215	ENST00000574095	MAGEB6	Q8N7X4	407 aa		31.76	■■■□□ 2.67
NPLOC4-215	ENST00000574095	EFCC1	Q9HA90	598 aa		31.76	■■■□□ 2.67
NPLOC4-215	ENST00000574095	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	31.76	■■■□□ 2.67
NPLOC4-215	ENST00000574095	PDHX	O00330	501 aa		31.75	■■■□□ 2.67
NPLOC4-215	ENST00000574095	IFIT2	P09913	472 aa	Known RBP	31.75	■■■□□ 2.67
NPLOC4-215	ENST00000574095	AFG3L2	Q9Y4W6	797 aa		31.75	■■■□□ 2.67
NPLOC4-215	ENST00000574095	MLLT1	Q03111	559 aa	Predicted RBP	31.74	■■■□□ 2.67
NPLOC4-215	ENST00000574095	CCDC84	Q86UT8	332 aa	Predicted RBP	31.74	■■■□□ 2.67
NPLOC4-215	ENST00000574095	MIGA1	Q8NAN2	632 aa		31.74	■■■□□ 2.67
NPLOC4-215	ENST00000574095	FOCAD	Q5VW36	1801 aa		31.74	■■■□□ 2.67

Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms