RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 CTU1Q7Z7A3 348 aaKnown RBP13.35□□□□□ -0.27
CHD3-216ENST00000573936 FAM151AQ8WW52 585 aa13.35□□□□□ -0.27
CHD3-216ENST00000573936 HOOK2Q96ED9 719 aa13.35□□□□□ -0.27
CHD3-216ENST00000573936 PPP1R12BO60237 982 aaPredicted RBP13.34□□□□□ -0.27
CHD3-216ENST00000573936 ENTPD3O75355 529 aa13.34□□□□□ -0.27
CHD3-216ENST00000573936 NPM3O75607 178 aaKnown RBP13.34□□□□□ -0.27
CHD3-216ENST00000573936 CACNB3P54284 484 aa13.34□□□□□ -0.27
CHD3-216ENST00000573936 PRAMEF18Q5VWM3 479 aa13.34□□□□□ -0.27
CHD3-216ENST00000573936 TSHZ3Q63HK5 1081 aa13.34□□□□□ -0.27
CHD3-216ENST00000573936 ARMC9Q7Z3E5 817 aa13.34□□□□□ -0.27
CHD3-216ENST00000573936 RASAL3Q86YV0 1011 aa13.34□□□□□ -0.27
CHD3-216ENST00000573936 PI4K2BQ8TCG2 481 aa13.34□□□□□ -0.27
CHD3-216ENST00000573936 OTUD7AQ8TE49 926 aaPredicted RBP13.34□□□□□ -0.27
CHD3-216ENST00000573936 EDC3Q96F86 508 aaKnown RBP13.34□□□□□ -0.27
CHD3-216ENST00000573936 CSRNP1Q96S65 589 aa13.34□□□□□ -0.27
CHD3-216ENST00000573936 PDE6AP16499 860 aa13.33□□□□□ -0.28
CHD3-216ENST00000573936 RHBDL3P58872 404 aa13.33□□□□□ -0.28
CHD3-216ENST00000573936 UBE3CQ15386 1083 aa13.33□□□□□ -0.28
CHD3-216ENST00000573936 MOB2Q70IA6 237 aa13.33□□□□□ -0.28
CHD3-216ENST00000573936 TEX11Q8IYF3 940 aa13.33□□□□□ -0.28
CHD3-216ENST00000573936 KBTBD3Q8NAB2 608 aa13.33□□□□□ -0.28
CHD3-216ENST00000573936 OSBPL3Q9H4L5 887 aa13.33□□□□□ -0.28
CHD3-216ENST00000573936 AATFQ9NY61 560 aaKnown RBP eCLIP13.33□□□□□ -0.28
CHD3-216ENST00000573936 MYH2Q9UKX2 1941 aa13.33□□□□□ -0.28
CHD3-216ENST00000573936 RPAP1Q9BWH6 1393 aaPredicted RBP13.32□□□□□ -0.28
CHD3-216ENST00000573936 MAGEB6P1A0A0J9YX57 407 aa13.32□□□□□ -0.28
CHD3-216ENST00000573936 UNCXA6NJT0 531 aa13.32□□□□□ -0.28
CHD3-216ENST00000573936 ZFYP08048 801 aaPredicted RBP13.32□□□□□ -0.28
CHD3-216ENST00000573936 ADD2P35612 726 aa13.32□□□□□ -0.28
CHD3-216ENST00000573936 RGS3P49796 1198 aa13.32□□□□□ -0.28
CHD3-216ENST00000573936 TCP10Q12799 353 aa13.32□□□□□ -0.28
CHD3-216ENST00000573936 TTLL12Q14166 644 aaPredicted RBP13.32□□□□□ -0.28
CHD3-216ENST00000573936 PKN2Q16513 984 aaKnown RBP13.32□□□□□ -0.28
CHD3-216ENST00000573936 NBPF12Q5TAG4 269 aaPredicted RBP13.32□□□□□ -0.28
CHD3-216ENST00000573936 CENPQQ7L2Z9 268 aaPredicted RBP13.32□□□□□ -0.28
CHD3-216ENST00000573936 TEPSINQ96N21 525 aa13.32□□□□□ -0.28
CHD3-216ENST00000573936 TMEM39BQ9GZU3 492 aa13.32□□□□□ -0.28
CHD3-216ENST00000573936 FAM198AQ9UFP1 575 aa13.32□□□□□ -0.28
CHD3-216ENST00000573936 ZNF532Q9HCE3 1301 aa13.32□□□□□ -0.28
CHD3-216ENST00000573936 MAST2Q6P0Q8 1798 aa13.32□□□□□ -0.28
CHD3-216ENST00000573936 HTTP42858 3142 aa13.31□□□□□ -0.28
CHD3-216ENST00000573936 TCRBV5S4A2TA0A5A2 114 aa13.31□□□□□ -0.28
CHD3-216ENST00000573936 WDHD1O75717 1129 aaPredicted RBP13.31□□□□□ -0.28
CHD3-216ENST00000573936 IREB2P48200 963 aaKnown RBP13.31□□□□□ -0.28
CHD3-216ENST00000573936 NFIAQ12857 509 aa13.31□□□□□ -0.28
CHD3-216ENST00000573936 PICALMQ13492 652 aa13.31□□□□□ -0.28
CHD3-216ENST00000573936 MAP3K11Q16584 847 aa13.31□□□□□ -0.28
CHD3-216ENST00000573936 PRPF38BQ5VTL8 546 aaKnown RBP13.31□□□□□ -0.28
CHD3-216ENST00000573936 DCAF15Q66K64 600 aa13.31□□□□□ -0.28
CHD3-216ENST00000573936 ADGRA1Q86SQ6 560 aa13.31□□□□□ -0.28
CHD3-216ENST00000573936 TICAM2Q86XR7 235 aa13.31□□□□□ -0.28
CHD3-216ENST00000573936 PLEKHM2Q8IWE5 1019 aa13.31□□□□□ -0.28
CHD3-216ENST00000573936 SH3RF3Q8TEJ3 882 aaPredicted RBP13.31□□□□□ -0.28
CHD3-216ENST00000573936 EVI5LQ96CN4 794 aa13.31□□□□□ -0.28
CHD3-216ENST00000573936 CCDC136Q96JN2 1154 aa13.31□□□□□ -0.28
CHD3-216ENST00000573936 GTF3C3Q9Y5Q9 886 aa13.31□□□□□ -0.28
CHD3-216ENST00000573936 DOCK2Q92608 1830 aa13.3□□□□□ -0.28
CHD3-216ENST00000573936 RNF113AO15541 343 aaKnown RBP13.3□□□□□ -0.28
CHD3-216ENST00000573936 DYNLL1P63167 89 aaKnown RBP13.3□□□□□ -0.28
CHD3-216ENST00000573936 ZSCAN29Q8IWY8 852 aaPredicted RBP13.3□□□□□ -0.28
CHD3-216ENST00000573936 MIGA1Q8NAN2 632 aa13.3□□□□□ -0.28
CHD3-216ENST00000573936 FSD1Q9BTV5 496 aa13.3□□□□□ -0.28
CHD3-216ENST00000573936 ANGEL1Q9UNK9 670 aaKnown RBP13.3□□□□□ -0.28
CHD3-216ENST00000573936 UBE2Q2LH0YL09 131 aa13.29□□□□□ -0.28
CHD3-216ENST00000573936 USP5P45974 858 aa13.29□□□□□ -0.28
CHD3-216ENST00000573936 PRKG1Q13976 671 aa13.29□□□□□ -0.28
CHD3-216ENST00000573936 TGFBRAP1Q8WUH2 860 aa13.29□□□□□ -0.28
CHD3-216ENST00000573936 RIOK1Q9BRS2 568 aaKnown RBP13.29□□□□□ -0.28
CHD3-216ENST00000573936 CRNKL1Q9BZJ0 848 aaKnown RBP13.29□□□□□ -0.28
CHD3-216ENST00000573936 OSBPL5Q9H0X9 879 aaPredicted RBP13.29□□□□□ -0.28
CHD3-216ENST00000573936 DHX36Q9H2U1 1008 aaKnown RBP13.29□□□□□ -0.28
CHD3-216ENST00000573936 DDX4Q9NQI0 724 aaKnown RBP13.29□□□□□ -0.28
CHD3-216ENST00000573936 HPS5Q9UPZ3 1129 aa13.29□□□□□ -0.28
CHD3-216ENST00000573936 RFX7Q2KHR2 1363 aa13.29□□□□□ -0.28
CHD3-216ENST00000573936 TRIM6-TRIM34B2RNG4 842 aa13.28□□□□□ -0.28
CHD3-216ENST00000573936 USP2O75604 605 aaPredicted RBP13.28□□□□□ -0.28
CHD3-216ENST00000573936 MKRN3Q13064 507 aaKnown RBP13.28□□□□□ -0.28
CHD3-216ENST00000573936 ZFPM1Q8IX07 1006 aa13.28□□□□□ -0.28
CHD3-216ENST00000573936 APPBP2Q92624 585 aa13.28□□□□□ -0.28
CHD3-216ENST00000573936 ZNF341Q9BYN7 854 aa13.28□□□□□ -0.28
CHD3-216ENST00000573936 CENPFP49454 3210 aa13.28□□□□□ -0.28
CHD3-216ENST00000573936 TBC1D8O95759 1140 aa13.27□□□□□ -0.29
CHD3-216ENST00000573936 MAP3K9P80192 1104 aa13.27□□□□□ -0.29
CHD3-216ENST00000573936 LDLRAD1Q5T700 205 aa13.27□□□□□ -0.29
CHD3-216ENST00000573936 MAPKAPK5Q8IW41 473 aa13.27□□□□□ -0.29
CHD3-216ENST00000573936 ANKRD13AQ8IZ07 590 aa13.27□□□□□ -0.29
CHD3-216ENST00000573936 RILPL2Q969X0 211 aa13.27□□□□□ -0.29
CHD3-216ENST00000573936 PPP4R2Q9NY27 417 aa13.27□□□□□ -0.29
CHD3-216ENST00000573936 FLT1P17948 1338 aa13.27□□□□□ -0.29
CHD3-216ENST00000573936 ATRNL1Q5VV63 1379 aa13.27□□□□□ -0.29
CHD3-216ENST00000573936 COL2A1P02458 1487 aaPredicted RBP13.27□□□□□ -0.29
CHD3-216ENST00000573936 SSC5DA1L4H1 1573 aa13.26□□□□□ -0.29
CHD3-216ENST00000573936 DDTLA6NHG4 134 aaPredicted RBP13.26□□□□□ -0.29
CHD3-216ENST00000573936 TBC1D12O60347 775 aa13.26□□□□□ -0.29
CHD3-216ENST00000573936 MBD4O95243 580 aa13.26□□□□□ -0.29
CHD3-216ENST00000573936 HLA-DOAP06340 250 aa13.26□□□□□ -0.29
CHD3-216ENST00000573936 PDE4AP27815 886 aa13.26□□□□□ -0.29
CHD3-216ENST00000573936 MAP3K10Q02779 954 aa13.26□□□□□ -0.29
CHD3-216ENST00000573936 CDAN1Q8IWY9 1227 aa13.26□□□□□ -0.29
CHD3-216ENST00000573936 ZNF296Q8WUU4 475 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms