RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 IL2RBP14784 551 aa13.89□□□□□ -0.19
PCDHGA9-201ENST00000573521 FERP16591 822 aa13.89□□□□□ -0.19
PCDHGA9-201ENST00000573521 CMA1P23946 247 aa13.89□□□□□ -0.19
PCDHGA9-201ENST00000573521 PUM3Q15397 648 aaKnown RBP13.89□□□□□ -0.19
PCDHGA9-201ENST00000573521 UTP14CQ5TAP6 766 aaKnown RBP13.89□□□□□ -0.19
PCDHGA9-201ENST00000573521 GBP6Q6ZN66 633 aa13.89□□□□□ -0.19
PCDHGA9-201ENST00000573521 TDRD7Q8NHU6 1098 aaKnown RBP13.89□□□□□ -0.19
PCDHGA9-201ENST00000573521 CCDC110Q8TBZ0 833 aa13.89□□□□□ -0.19
PCDHGA9-201ENST00000573521 TMEM63CQ9P1W3 806 aa13.89□□□□□ -0.19
PCDHGA9-201ENST00000573521 DKC1O60832 514 aaKnown RBP eCLIP13.89□□□□□ -0.19
PCDHGA9-201ENST00000573521 GBP1P32455 592 aa13.89□□□□□ -0.19
PCDHGA9-201ENST00000573521 CCDC144CPQ8IYA2 1237 aa13.89□□□□□ -0.19
PCDHGA9-201ENST00000573521 KIAA1468Q9P260 1216 aa13.89□□□□□ -0.19
PCDHGA9-201ENST00000573521 PARP2Q9UGN5 583 aa13.89□□□□□ -0.19
PCDHGA9-201ENST00000573521 GPTP24298 496 aa13.89□□□□□ -0.19
PCDHGA9-201ENST00000573521 SMC6Q96SB8 1091 aa13.89□□□□□ -0.19
PCDHGA9-201ENST00000573521 FEZ2Q9UHY8 353 aaPredicted RBP13.89□□□□□ -0.19
PCDHGA9-201ENST00000573521 CEP83Q9Y592 693 aa13.89□□□□□ -0.19
PCDHGA9-201ENST00000573521 ARAP3Q8WWN8 1544 aa13.89□□□□□ -0.19
PCDHGA9-201ENST00000573521 WDHD1O75717 1129 aaPredicted RBP13.89□□□□□ -0.19
PCDHGA9-201ENST00000573521 ETF1P62495 437 aaKnown RBP13.89□□□□□ -0.19
PCDHGA9-201ENST00000573521 MICALL1Q8N3F8 863 aa13.89□□□□□ -0.19
PCDHGA9-201ENST00000573521 CCDC114Q96M63 670 aa13.89□□□□□ -0.19
PCDHGA9-201ENST00000573521 C19orf44Q9H6X5 657 aa13.89□□□□□ -0.19
PCDHGA9-201ENST00000573521 STIM2Q9P246 746 aa13.89□□□□□ -0.19
PCDHGA9-201ENST00000573521 YEATS2Q9ULM3 1422 aa13.88□□□□□ -0.19
PCDHGA9-201ENST00000573521 LIG1P18858 919 aa13.88□□□□□ -0.19
PCDHGA9-201ENST00000573521 CCDC6Q16204 474 aa13.88□□□□□ -0.19
PCDHGA9-201ENST00000573521 SLC9C1Q4G0N8 1177 aa13.88□□□□□ -0.19
PCDHGA9-201ENST00000573521 ISM2Q6H9L7 571 aa13.88□□□□□ -0.19
PCDHGA9-201ENST00000573521 HEATR3Q7Z4Q2 680 aa13.88□□□□□ -0.19
PCDHGA9-201ENST00000573521 TCEANC2Q96MN5 208 aa13.88□□□□□ -0.19
PCDHGA9-201ENST00000573521 LRRC2Q9BYS8 371 aa13.88□□□□□ -0.19
PCDHGA9-201ENST00000573521 PA2G4Q9UQ80 394 aaKnown RBP13.88□□□□□ -0.19
PCDHGA9-201ENST00000573521 KDRP35968 1356 aa13.88□□□□□ -0.19
PCDHGA9-201ENST00000573521 PLEKHG1Q9ULL1 1385 aa13.88□□□□□ -0.19
PCDHGA9-201ENST00000573521 ARID4AP29374 1257 aaPredicted RBP13.88□□□□□ -0.19
PCDHGA9-201ENST00000573521 SEL1L2Q5TEA6 688 aa13.88□□□□□ -0.19
PCDHGA9-201ENST00000573521 WDR78Q5VTH9 848 aa13.88□□□□□ -0.19
PCDHGA9-201ENST00000573521 C8orf74Q6P047 294 aa13.88□□□□□ -0.19
PCDHGA9-201ENST00000573521 A0A1B0GVL5 298 aa13.88□□□□□ -0.19
PCDHGA9-201ENST00000573521 CEBPAP49715 358 aaPredicted RBP13.88□□□□□ -0.19
PCDHGA9-201ENST00000573521 ZNF790Q6PG37 636 aa13.88□□□□□ -0.19
PCDHGA9-201ENST00000573521 SECISBP2LQ93073 1101 aaKnown RBP13.88□□□□□ -0.19
PCDHGA9-201ENST00000573521 PRDM15P57071 1507 aaPredicted RBP13.88□□□□□ -0.19
PCDHGA9-201ENST00000573521 POSTNQ15063 836 aa13.87□□□□□ -0.19
PCDHGA9-201ENST00000573521 LZTFL1Q9NQ48 299 aa13.87□□□□□ -0.19
PCDHGA9-201ENST00000573521 SPDYE3A6NKU9 549 aa13.87□□□□□ -0.19
PCDHGA9-201ENST00000573521 IKBKBO14920 756 aa13.87□□□□□ -0.19
PCDHGA9-201ENST00000573521 NBPF6Q5VWK0 638 aa13.87□□□□□ -0.19
PCDHGA9-201ENST00000573521 TAOK1Q7L7X3 1001 aa13.87□□□□□ -0.19
PCDHGA9-201ENST00000573521 KIFAP3Q92845 792 aa13.87□□□□□ -0.19
PCDHGA9-201ENST00000573521 VTI1AQ96AJ9 217 aa13.87□□□□□ -0.19
PCDHGA9-201ENST00000573521 NBPF4Q96M43 638 aa13.87□□□□□ -0.19
PCDHGA9-201ENST00000573521 NOC4LQ9BVI4 516 aaKnown RBP13.87□□□□□ -0.19
PCDHGA9-201ENST00000573521 HAUS4Q9H6D7 363 aa13.87□□□□□ -0.19
PCDHGA9-201ENST00000573521 MROH5Q6ZUA9 1318 aa13.87□□□□□ -0.19
PCDHGA9-201ENST00000573521 CPSF1Q10570 1443 aaKnown RBP13.87□□□□□ -0.19
PCDHGA9-201ENST00000573521 IRS4O14654 1257 aaPredicted RBP13.87□□□□□ -0.19
PCDHGA9-201ENST00000573521 GCP02774 474 aa13.87□□□□□ -0.19
PCDHGA9-201ENST00000573521 EPB41P11171 864 aaKnown RBP13.87□□□□□ -0.19
PCDHGA9-201ENST00000573521 SF3B2Q13435 895 aaKnown RBP13.87□□□□□ -0.19
PCDHGA9-201ENST00000573521 PPFIBP2Q8ND30 876 aa13.87□□□□□ -0.19
PCDHGA9-201ENST00000573521 SH2D4AQ9H788 454 aa13.87□□□□□ -0.19
PCDHGA9-201ENST00000573521 NKIRAS1Q9NYS0 192 aa13.87□□□□□ -0.19
PCDHGA9-201ENST00000573521 ZFYVE16Q7Z3T8 1539 aa13.87□□□□□ -0.19
PCDHGA9-201ENST00000573521 STX10O60499 249 aa13.87□□□□□ -0.19
PCDHGA9-201ENST00000573521 CFAP221Q4G0U5 840 aa13.87□□□□□ -0.19
PCDHGA9-201ENST00000573521 MYSM1Q5VVJ2 828 aa13.87□□□□□ -0.19
PCDHGA9-201ENST00000573521 TMEM87AQ8NBN3 555 aa13.87□□□□□ -0.19
PCDHGA9-201ENST00000573521 TRIM58Q8NG06 486 aa13.87□□□□□ -0.19
PCDHGA9-201ENST00000573521 CETN3O15182 167 aa13.86□□□□□ -0.19
PCDHGA9-201ENST00000573521 FAM13AO94988 1023 aa13.86□□□□□ -0.19
PCDHGA9-201ENST00000573521 DIS3L2Q8IYB7 885 aaKnown RBP13.86□□□□□ -0.19
PCDHGA9-201ENST00000573521 LPIN2Q92539 896 aa13.86□□□□□ -0.19
PCDHGA9-201ENST00000573521 MAST3O60307 1309 aa13.86□□□□□ -0.19
PCDHGA9-201ENST00000573521 GOLGA6CA6NDK9 693 aa13.86□□□□□ -0.19
PCDHGA9-201ENST00000573521 GOLGA6DP0CG33 693 aa13.86□□□□□ -0.19
PCDHGA9-201ENST00000573521 TPTE2Q6XPS3 522 aa13.86□□□□□ -0.19
PCDHGA9-201ENST00000573521 GOLGA6AQ9NYA3 693 aa13.86□□□□□ -0.19
PCDHGA9-201ENST00000573521 MTMR6Q9Y217 621 aa13.86□□□□□ -0.19
PCDHGA9-201ENST00000573521 ERCC6L2Q5T890 1561 aa13.86□□□□□ -0.19
PCDHGA9-201ENST00000573521 CALUO43852 315 aaPredicted RBP13.86□□□□□ -0.19
PCDHGA9-201ENST00000573521 NBPF5PQ86XG9 351 aaPredicted RBP13.86□□□□□ -0.19
PCDHGA9-201ENST00000573521 PPP1R14CQ8TAE6 165 aa13.86□□□□□ -0.19
PCDHGA9-201ENST00000573521 CUEDC2Q9H467 287 aa13.86□□□□□ -0.19
PCDHGA9-201ENST00000573521 NFE2L3Q9Y4A8 694 aa13.86□□□□□ -0.19
PCDHGA9-201ENST00000573521 MBD5Q9P267 1494 aa13.86□□□□□ -0.19
PCDHGA9-201ENST00000573521 PDE8AO60658 829 aa13.86□□□□□ -0.19
PCDHGA9-201ENST00000573521 MYL1P05976 194 aa13.86□□□□□ -0.19
PCDHGA9-201ENST00000573521 UBE4AQ14139 1066 aa13.86□□□□□ -0.19
PCDHGA9-201ENST00000573521 GCKRQ14397 625 aa13.86□□□□□ -0.19
PCDHGA9-201ENST00000573521 RABGGTAQ92696 567 aa13.86□□□□□ -0.19
PCDHGA9-201ENST00000573521 SETDB2Q96T68 719 aa13.86□□□□□ -0.19
PCDHGA9-201ENST00000573521 ERCC5P28715 1186 aaPredicted RBP13.85□□□□□ -0.19
PCDHGA9-201ENST00000573521 KARSQ15046 597 aaKnown RBP13.85□□□□□ -0.19
PCDHGA9-201ENST00000573521 TTC38Q5R3I4 469 aa13.85□□□□□ -0.19
PCDHGA9-201ENST00000573521 UBL4BQ8N7F7 174 aa13.85□□□□□ -0.19
PCDHGA9-201ENST00000573521 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.85□□□□□ -0.19
PCDHGA9-201ENST00000573521 FLOT1O75955 427 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms