RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 DDTLA6NHG4 134 aaPredicted RBP21.74■■□□□ 1.07
CTDNEP1-207ENST00000572043 SPDYE5A6NIY4 337 aa21.74■■□□□ 1.07
CTDNEP1-207ENST00000572043 GPR25O00155 361 aa21.74■■□□□ 1.07
CTDNEP1-207ENST00000572043 ALDH1A1P00352 501 aa21.74■■□□□ 1.07
CTDNEP1-207ENST00000572043 CLASRPQ8N2M8 674 aaKnown RBP21.74■■□□□ 1.07
CTDNEP1-207ENST00000572043 KIF1BPQ96EK5 621 aa21.74■■□□□ 1.07
CTDNEP1-207ENST00000572043 PTPN18Q99952 460 aa21.74■■□□□ 1.07
CTDNEP1-207ENST00000572043 NOL10Q9BSC4 688 aaKnown RBP21.74■■□□□ 1.07
CTDNEP1-207ENST00000572043 AATFQ9NY61 560 aaKnown RBP eCLIP21.74■■□□□ 1.07
CTDNEP1-207ENST00000572043 CCL15-CCL14A0A0B4J2E2 113 aa21.73■■□□□ 1.07
CTDNEP1-207ENST00000572043 IDH1O75874 414 aaKnown RBP21.73■■□□□ 1.07
CTDNEP1-207ENST00000572043 CCL15Q16663 113 aa21.73■■□□□ 1.07
CTDNEP1-207ENST00000572043 ERO1BQ86YB8 467 aa21.73■■□□□ 1.07
CTDNEP1-207ENST00000572043 SH3RF3Q8TEJ3 882 aaPredicted RBP21.73■■□□□ 1.07
CTDNEP1-207ENST00000572043 MS4A4AQ96JQ5 239 aa21.73■■□□□ 1.07
CTDNEP1-207ENST00000572043 OTOFQ9HC10 1997 aa21.72■■□□□ 1.07
CTDNEP1-207ENST00000572043 IFIT2P09913 472 aaKnown RBP21.72■■□□□ 1.07
CTDNEP1-207ENST00000572043 ADGRA1Q86SQ6 560 aa21.72■■□□□ 1.07
CTDNEP1-207ENST00000572043 TEX11Q8IYF3 940 aa21.72■■□□□ 1.07
CTDNEP1-207ENST00000572043 BRI3BPQ8WY22 251 aa21.72■■□□□ 1.07
CTDNEP1-207ENST00000572043 ANTXR1Q9H6X2 564 aa21.72■■□□□ 1.07
CTDNEP1-207ENST00000572043 TESPA1A2RU30 521 aaPredicted RBP21.71■■□□□ 1.07
CTDNEP1-207ENST00000572043 CCDC85CA6NKD9 419 aa21.71■■□□□ 1.07
CTDNEP1-207ENST00000572043 RAB11FIP3O75154 756 aa21.71■■□□□ 1.07
CTDNEP1-207ENST00000572043 GTF2A2P52657 109 aa21.71■■□□□ 1.07
CTDNEP1-207ENST00000572043 OTUD7BQ6GQQ9 843 aa21.71■■□□□ 1.07
CTDNEP1-207ENST00000572043 ZNF112Q9UJU3 913 aa21.71■■□□□ 1.07
CTDNEP1-207ENST00000572043 IRF6O14896 467 aa21.7■■□□□ 1.06
CTDNEP1-207ENST00000572043 BAG3O95817 575 aa21.7■■□□□ 1.06
CTDNEP1-207ENST00000572043 ATRNL1Q5VV63 1379 aa21.7■■□□□ 1.06
CTDNEP1-207ENST00000572043 MYH2Q9UKX2 1941 aa21.7■■□□□ 1.06
CTDNEP1-207ENST00000572043 AKAP11Q9UKA4 1901 aa21.69■■□□□ 1.06
CTDNEP1-207ENST00000572043 CASP8AP2Q9UKL3 1982 aa21.69■■□□□ 1.06
CTDNEP1-207ENST00000572043 FAM196BA6NMK8 535 aa21.69■■□□□ 1.06
CTDNEP1-207ENST00000572043 FKTNO75072 461 aa21.69■■□□□ 1.06
CTDNEP1-207ENST00000572043 CYP7A1P22680 504 aa21.69■■□□□ 1.06
CTDNEP1-207ENST00000572043 CRHR2Q13324 411 aa21.69■■□□□ 1.06
CTDNEP1-207ENST00000572043 CTU1Q7Z7A3 348 aaKnown RBP21.69■■□□□ 1.06
CTDNEP1-207ENST00000572043 CFHR5Q9BXR6 569 aa21.69■■□□□ 1.06
CTDNEP1-207ENST00000572043 OSBPL5Q9H0X9 879 aaPredicted RBP21.69■■□□□ 1.06
CTDNEP1-207ENST00000572043 RRP1P56182 461 aaKnown RBP21.68■■□□□ 1.06
CTDNEP1-207ENST00000572043 DYNLL1P63167 89 aaKnown RBP21.68■■□□□ 1.06
CTDNEP1-207ENST00000572043 PPIL2Q13356 520 aa21.68■■□□□ 1.06
CTDNEP1-207ENST00000572043 SNAPC2Q13487 334 aa21.68■■□□□ 1.06
CTDNEP1-207ENST00000572043 FAM43AQ8N2R8 423 aa21.68■■□□□ 1.06
CTDNEP1-207ENST00000572043 MAGEB6Q8N7X4 407 aa21.68■■□□□ 1.06
CTDNEP1-207ENST00000572043 MIGA1Q8NAN2 632 aa21.68■■□□□ 1.06
CTDNEP1-207ENST00000572043 DNAJC2Q99543 621 aaKnown RBP21.68■■□□□ 1.06
CTDNEP1-207ENST00000572043 PHF20L1A8MW92 1017 aa21.67■■□□□ 1.06
CTDNEP1-207ENST00000572043 SMARCA5O60264 1052 aaPredicted RBP21.67■■□□□ 1.06
CTDNEP1-207ENST00000572043 CETPP11597 493 aa21.67■■□□□ 1.06
CTDNEP1-207ENST00000572043 PPATQ06203 517 aa21.67■■□□□ 1.06
CTDNEP1-207ENST00000572043 MAPKAPK5Q8IW41 473 aa21.67■■□□□ 1.06
CTDNEP1-207ENST00000572043 TGFBRAP1Q8WUH2 860 aa21.67■■□□□ 1.06
CTDNEP1-207ENST00000572043 MAP4K4O95819 1239 aaPredicted RBP21.66■■□□□ 1.06
CTDNEP1-207ENST00000572043 TAF1CQ15572 869 aaPredicted RBP21.66■■□□□ 1.06
CTDNEP1-207ENST00000572043 NOL9Q5SY16 702 aaKnown RBP21.66■■□□□ 1.06
CTDNEP1-207ENST00000572043 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.66■■□□□ 1.06
CTDNEP1-207ENST00000572043 PICK1Q9NRD5 415 aa21.66■■□□□ 1.06
CTDNEP1-207ENST00000572043 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.66■■□□□ 1.06
CTDNEP1-207ENST00000572043 BTBD19C9JJ37 291 aa21.65■■□□□ 1.06
CTDNEP1-207ENST00000572043 GOLIM4O00461 696 aa21.65■■□□□ 1.06
CTDNEP1-207ENST00000572043 NPM3O75607 178 aaKnown RBP21.65■■□□□ 1.06
CTDNEP1-207ENST00000572043 PLCG2P16885 1265 aa21.65■■□□□ 1.06
CTDNEP1-207ENST00000572043 PPP4CP60510 307 aa21.65■■□□□ 1.06
CTDNEP1-207ENST00000572043 MAP3K12Q12852 859 aa21.65■■□□□ 1.06
CTDNEP1-207ENST00000572043 NOM1Q5C9Z4 860 aaKnown RBP21.65■■□□□ 1.06
CTDNEP1-207ENST00000572043 SCYL3Q8IZE3 742 aa21.65■■□□□ 1.06
CTDNEP1-207ENST00000572043 LRRCC1Q9C099 1032 aa21.65■■□□□ 1.06
CTDNEP1-207ENST00000572043 SLC4A8Q2Y0W8 1093 aa21.64■■□□□ 1.05
CTDNEP1-207ENST00000572043 CCDC84Q86UT8 332 aaPredicted RBP21.64■■□□□ 1.05
CTDNEP1-207ENST00000572043 EDC3Q96F86 508 aaKnown RBP21.64■■□□□ 1.05
CTDNEP1-207ENST00000572043 BOLA2Q9H3K6 86 aa21.64■■□□□ 1.05
CTDNEP1-207ENST00000572043 SAP30BPQ9UHR5 308 aaKnown RBP21.64■■□□□ 1.05
CTDNEP1-207ENST00000572043 ZHX2Q9Y6X8 837 aa21.64■■□□□ 1.05
CTDNEP1-207ENST00000572043 FLT1P17948 1338 aa21.63■■□□□ 1.05
CTDNEP1-207ENST00000572043 MAP3K10Q02779 954 aa21.63■■□□□ 1.05
CTDNEP1-207ENST00000572043 ZFYVE28Q9HCC9 887 aa21.63■■□□□ 1.05
CTDNEP1-207ENST00000572043 PTPRAP18433 802 aa21.62■■□□□ 1.05
CTDNEP1-207ENST00000572043 TTF1Q15361 905 aaPredicted RBP21.62■■□□□ 1.05
CTDNEP1-207ENST00000572043 CD99L2Q8TCZ2 262 aa21.62■■□□□ 1.05
CTDNEP1-207ENST00000572043 CRBNQ96SW2 442 aa21.62■■□□□ 1.05
CTDNEP1-207ENST00000572043 MAST2Q6P0Q8 1798 aa21.61■■□□□ 1.05
CTDNEP1-207ENST00000572043 CTNND1O60716 968 aaKnown RBP21.61■■□□□ 1.05
CTDNEP1-207ENST00000572043 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.61■■□□□ 1.05
CTDNEP1-207ENST00000572043 PALD1Q9ULE6 856 aa21.61■■□□□ 1.05
CTDNEP1-207ENST00000572043 KCNH4Q9UQ05 1017 aa21.61■■□□□ 1.05
CTDNEP1-207ENST00000572043 TRIM17Q9Y577 477 aa21.61■■□□□ 1.05
CTDNEP1-207ENST00000572043 PCDHB15Q9Y5E8 787 aa21.61■■□□□ 1.05
CTDNEP1-207ENST00000572043 TBC1D12O60347 775 aa21.6■■□□□ 1.05
CTDNEP1-207ENST00000572043 IGSF3O75054 1194 aa21.6■■□□□ 1.05
CTDNEP1-207ENST00000572043 USP5P45974 858 aa21.6■■□□□ 1.05
CTDNEP1-207ENST00000572043 SLC9C2Q5TAH2 1124 aa21.6■■□□□ 1.05
CTDNEP1-207ENST00000572043 PI4KBQ9UBF8 816 aa21.6■■□□□ 1.05
CTDNEP1-207ENST00000572043 DOCK2Q92608 1830 aa21.59■■□□□ 1.05
CTDNEP1-207ENST00000572043 COL2A1P02458 1487 aaPredicted RBP21.59■■□□□ 1.05
CTDNEP1-207ENST00000572043 AK9Q5TCS8 1911 aa21.59■■□□□ 1.05
CTDNEP1-207ENST00000572043 ECM2O94769 699 aaPredicted RBP21.59■■□□□ 1.05
CTDNEP1-207ENST00000572043 PDE6AP16499 860 aa21.59■■□□□ 1.05
CTDNEP1-207ENST00000572043 SP3Q02447 781 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms