RNA–Protein interactions for RNA: ENST00000571562.1

NPLOC4-205, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-205ENST00000571562 BEND7Q8N7W2 519 aaPredicted RBP6.47□□□□□ -1.37
NPLOC4-205ENST00000571562 NKD1Q969G9 470 aa6.47□□□□□ -1.37
NPLOC4-205ENST00000571562 TMPRSS13Q9BYE2 586 aa6.47□□□□□ -1.37
NPLOC4-205ENST00000571562 RNF208Q9H0X6 261 aa6.47□□□□□ -1.37
NPLOC4-205ENST00000571562 BRMS1Q9HCU9 246 aa6.47□□□□□ -1.37
NPLOC4-205ENST00000571562 PPP1R1BQ9UD71 204 aaPredicted RBP6.47□□□□□ -1.37
NPLOC4-205ENST00000571562 ADH5P11766 374 aa6.46□□□□□ -1.38
NPLOC4-205ENST00000571562 HP1BP3Q5SSJ5 553 aaPredicted RBP6.46□□□□□ -1.38
NPLOC4-205ENST00000571562 SCARA3Q6AZY7 606 aa6.46□□□□□ -1.38
NPLOC4-205ENST00000571562 IGF2-ASQ6U949 168 aa6.46□□□□□ -1.38
NPLOC4-205ENST00000571562 GK5Q6ZS86 529 aa6.46□□□□□ -1.38
NPLOC4-205ENST00000571562 ELMO3Q96BJ8 720 aa6.46□□□□□ -1.38
NPLOC4-205ENST00000571562 GMLQ99445 158 aa6.46□□□□□ -1.38
NPLOC4-205ENST00000571562 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.46□□□□□ -1.38
NPLOC4-205ENST00000571562 PPP1R9AQ9ULJ8 1098 aa6.46□□□□□ -1.38
NPLOC4-205ENST00000571562 CORINQ9Y5Q5 1042 aa6.46□□□□□ -1.38
NPLOC4-205ENST00000571562 F8W735 103 aaPredicted RBP6.45□□□□□ -1.38
NPLOC4-205ENST00000571562 MCM4P33991 863 aa6.45□□□□□ -1.38
NPLOC4-205ENST00000571562 PREPP48147 710 aa6.45□□□□□ -1.38
NPLOC4-205ENST00000571562 SOX9P48436 509 aa6.45□□□□□ -1.38
NPLOC4-205ENST00000571562 ID3Q02535 119 aa6.45□□□□□ -1.38
NPLOC4-205ENST00000571562 ZC3H12AQ5D1E8 599 aaKnown RBP6.45□□□□□ -1.38
NPLOC4-205ENST00000571562 PPM1JQ5JR12 505 aa6.45□□□□□ -1.38
NPLOC4-205ENST00000571562 C12orf40Q86WS4 652 aa6.45□□□□□ -1.38
NPLOC4-205ENST00000571562 DHX38Q92620 1227 aaKnown RBP6.45□□□□□ -1.38
NPLOC4-205ENST00000571562 SCARF2Q96GP6 870 aaPredicted RBP6.45□□□□□ -1.38
NPLOC4-205ENST00000571562 RAD18Q9NS91 495 aa6.45□□□□□ -1.38
NPLOC4-205ENST00000571562 USP21Q9UK80 565 aa6.45□□□□□ -1.38
NPLOC4-205ENST00000571562 GFRA2O00451 464 aa6.44□□□□□ -1.38
NPLOC4-205ENST00000571562 TIAF1O95411 115 aa6.44□□□□□ -1.38
NPLOC4-205ENST00000571562 DRD2P14416 443 aa6.44□□□□□ -1.38
NPLOC4-205ENST00000571562 NTF4P34130 210 aa6.44□□□□□ -1.38
NPLOC4-205ENST00000571562 HNRNPUQ00839 825 aaKnown RBP eCLIP6.44□□□□□ -1.38
NPLOC4-205ENST00000571562 CLCQ05315 142 aa6.44□□□□□ -1.38
NPLOC4-205ENST00000571562 EXOSC6Q5RKV6 272 aaKnown RBP6.44□□□□□ -1.38
NPLOC4-205ENST00000571562 NUTM2GQ5VZR2 741 aa6.44□□□□□ -1.38
NPLOC4-205ENST00000571562 FDX2Q6P4F2 183 aa6.44□□□□□ -1.38
NPLOC4-205ENST00000571562 UBE3DQ7Z6J8 389 aa6.44□□□□□ -1.38
NPLOC4-205ENST00000571562 DRC1Q96MC2 740 aa6.44□□□□□ -1.38
NPLOC4-205ENST00000571562 HIF3AQ9Y2N7 669 aa6.44□□□□□ -1.38
NPLOC4-205ENST00000571562 ROBO2Q9HCK4 1378 aa6.44□□□□□ -1.38
NPLOC4-205ENST00000571562 HTR3BO95264 441 aa6.43□□□□□ -1.38
NPLOC4-205ENST00000571562 NEFMP07197 916 aa6.43□□□□□ -1.38
NPLOC4-205ENST00000571562 HCLS1P14317 486 aaPredicted RBP6.43□□□□□ -1.38
NPLOC4-205ENST00000571562 GLB1P16278 677 aa6.43□□□□□ -1.38
NPLOC4-205ENST00000571562 NOS3P29474 1203 aa6.43□□□□□ -1.38
NPLOC4-205ENST00000571562 GTF2F1P35269 517 aaKnown RBP eCLIP6.43□□□□□ -1.38
NPLOC4-205ENST00000571562 MBTPS1Q14703 1052 aa6.43□□□□□ -1.38
NPLOC4-205ENST00000571562 Q6ZS46 218 aa6.43□□□□□ -1.38
NPLOC4-205ENST00000571562 HDXQ7Z353 690 aa6.43□□□□□ -1.38
NPLOC4-205ENST00000571562 SEC16BQ96JE7 1060 aa6.43□□□□□ -1.38
NPLOC4-205ENST00000571562 SPATA32Q96LK8 384 aa6.43□□□□□ -1.38
NPLOC4-205ENST00000571562 FERD3LQ96RJ6 166 aa6.43□□□□□ -1.38
NPLOC4-205ENST00000571562 DNAJC2Q99543 621 aaKnown RBP6.43□□□□□ -1.38
NPLOC4-205ENST00000571562 AKTIPQ9H8T0 292 aa6.43□□□□□ -1.38
NPLOC4-205ENST00000571562 SUGCTQ9HAC7 445 aa6.43□□□□□ -1.38
NPLOC4-205ENST00000571562 CRIM1Q9NZV1 1036 aa6.43□□□□□ -1.38
NPLOC4-205ENST00000571562 ZNRF3Q9ULT6 936 aa6.43□□□□□ -1.38
NPLOC4-205ENST00000571562 PCDHB14Q9Y5E9 798 aa6.43□□□□□ -1.38
NPLOC4-205ENST00000571562 ACTL7BQ9Y614 415 aa6.43□□□□□ -1.38
NPLOC4-205ENST00000571562 MRVI1Q9Y6F6 885 aa6.43□□□□□ -1.38
NPLOC4-205ENST00000571562 GRK4P32298 578 aa6.42□□□□□ -1.38
NPLOC4-205ENST00000571562 CHRNA4P43681 627 aa6.42□□□□□ -1.38
NPLOC4-205ENST00000571562 ERVK-24P63145 666 aa6.42□□□□□ -1.38
NPLOC4-205ENST00000571562 FBXW10Q5XX13 1052 aa6.42□□□□□ -1.38
NPLOC4-205ENST00000571562 CYFIP1Q7L576 1253 aa6.42□□□□□ -1.38
NPLOC4-205ENST00000571562 VPS37DQ86XT2 251 aa6.42□□□□□ -1.38
NPLOC4-205ENST00000571562 C2CD4AQ8NCU7 369 aaPredicted RBP6.42□□□□□ -1.38
NPLOC4-205ENST00000571562 SMG8Q8ND04 991 aaKnown RBP6.42□□□□□ -1.38
NPLOC4-205ENST00000571562 LENG1Q96BZ8 264 aaPredicted RBP6.42□□□□□ -1.38
NPLOC4-205ENST00000571562 FANCD2OSQ96PS1 177 aa6.42□□□□□ -1.38
NPLOC4-205ENST00000571562 SRRTQ9BXP5 876 aaKnown RBP6.42□□□□□ -1.38
NPLOC4-205ENST00000571562 ZNF408Q9H9D4 720 aa6.42□□□□□ -1.38
NPLOC4-205ENST00000571562 CYP4F12Q9HCS2 524 aa6.42□□□□□ -1.38
NPLOC4-205ENST00000571562 PICK1Q9NRD5 415 aa6.42□□□□□ -1.38
NPLOC4-205ENST00000571562 FAM105AQ9NUU6 356 aa6.42□□□□□ -1.38
NPLOC4-205ENST00000571562 MEGF11A6BM72 1044 aa6.41□□□□□ -1.38
NPLOC4-205ENST00000571562 DNAJA2O60884 412 aa6.41□□□□□ -1.38
NPLOC4-205ENST00000571562 APBA3O96018 575 aa6.41□□□□□ -1.38
NPLOC4-205ENST00000571562 SSBP05455 408 aaKnown RBP eCLIP6.41□□□□□ -1.38
NPLOC4-205ENST00000571562 SLFN14P0C7P3 912 aa6.41□□□□□ -1.38
NPLOC4-205ENST00000571562 ATP2B1P20020 1258 aa6.41□□□□□ -1.38
NPLOC4-205ENST00000571562 RAB6AP20340 208 aa6.41□□□□□ -1.38
NPLOC4-205ENST00000571562 IREB2P48200 963 aaKnown RBP6.41□□□□□ -1.38
NPLOC4-205ENST00000571562 ZNF165P49910 485 aa6.41□□□□□ -1.38
NPLOC4-205ENST00000571562 RING1Q06587 406 aa6.41□□□□□ -1.38
NPLOC4-205ENST00000571562 SOX4Q06945 474 aaPredicted RBP6.41□□□□□ -1.38
NPLOC4-205ENST00000571562 COL9A2Q14055 689 aaPredicted RBP6.41□□□□□ -1.38
NPLOC4-205ENST00000571562 TTLL4Q14679 1199 aa6.41□□□□□ -1.38
NPLOC4-205ENST00000571562 ZBTB37Q5TC79 503 aa6.41□□□□□ -1.38
NPLOC4-205ENST00000571562 DIEXFQ68CQ4 756 aaKnown RBP6.41□□□□□ -1.38
NPLOC4-205ENST00000571562 ANKRD34AQ69YU3 496 aa6.41□□□□□ -1.38
NPLOC4-205ENST00000571562 DYMQ7RTS9 669 aa6.41□□□□□ -1.38
NPLOC4-205ENST00000571562 LSRQ86X29 649 aaPredicted RBP6.41□□□□□ -1.38
NPLOC4-205ENST00000571562 FAM169BQ8N8A8 192 aa6.41□□□□□ -1.38
NPLOC4-205ENST00000571562 C12orf50Q8NA57 414 aaPredicted RBP6.41□□□□□ -1.38
NPLOC4-205ENST00000571562 UBXN4Q92575 508 aa6.41□□□□□ -1.38
NPLOC4-205ENST00000571562 ANAPC16Q96DE5 110 aa6.41□□□□□ -1.38
NPLOC4-205ENST00000571562 SHDQ96IW2 340 aa6.41□□□□□ -1.38
NPLOC4-205ENST00000571562 MEGF10Q96KG7 1140 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 183.8 ms