RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 COG6Q9Y2V7 657 aa16.9■□□□□ 0.3
RAB40B-204ENST00000571554 TRIM17Q9Y577 477 aa16.9■□□□□ 0.3
RAB40B-204ENST00000571554 GPR75-ASB3A0A0A6YYF3 556 aa16.89■□□□□ 0.29
RAB40B-204ENST00000571554 ENTPD3O75355 529 aa16.89■□□□□ 0.29
RAB40B-204ENST00000571554 RHBDL3P58872 404 aa16.89■□□□□ 0.29
RAB40B-204ENST00000571554 CAP1Q01518 475 aa16.89■□□□□ 0.29
RAB40B-204ENST00000571554 PPIL2Q13356 520 aa16.89■□□□□ 0.29
RAB40B-204ENST00000571554 CCDC158Q5M9N0 1113 aa16.89■□□□□ 0.29
RAB40B-204ENST00000571554 ZNF112Q9UJU3 913 aa16.89■□□□□ 0.29
RAB40B-204ENST00000571554 DBNLQ9UJU6 430 aaKnown RBP16.89■□□□□ 0.29
RAB40B-204ENST00000571554 NOP58Q9Y2X3 529 aaKnown RBP16.89■□□□□ 0.29
RAB40B-204ENST00000571554 MAST2Q6P0Q8 1798 aa16.89■□□□□ 0.29
RAB40B-204ENST00000571554 ATRNL1Q5VV63 1379 aa16.89■□□□□ 0.29
RAB40B-204ENST00000571554 FAM196BA6NMK8 535 aa16.88■□□□□ 0.29
RAB40B-204ENST00000571554 BTBD19C9JJ37 291 aa16.88■□□□□ 0.29
RAB40B-204ENST00000571554 APBB1O00213 710 aa16.88■□□□□ 0.29
RAB40B-204ENST00000571554 ECM2O94769 699 aaPredicted RBP16.88■□□□□ 0.29
RAB40B-204ENST00000571554 CETPP11597 493 aa16.88■□□□□ 0.29
RAB40B-204ENST00000571554 ZAP70P43403 619 aa16.88■□□□□ 0.29
RAB40B-204ENST00000571554 GSTO1P78417 241 aa16.88■□□□□ 0.29
RAB40B-204ENST00000571554 MLLT1Q03111 559 aaPredicted RBP16.88■□□□□ 0.29
RAB40B-204ENST00000571554 SNAPC2Q13487 334 aa16.88■□□□□ 0.29
RAB40B-204ENST00000571554 PKN2Q16513 984 aaKnown RBP16.88■□□□□ 0.29
RAB40B-204ENST00000571554 FBXO46Q6PJ61 603 aaPredicted RBP16.88■□□□□ 0.29
RAB40B-204ENST00000571554 OTOP1Q7RTM1 612 aa16.88■□□□□ 0.29
RAB40B-204ENST00000571554 EAF2Q96CJ1 260 aaPredicted RBP16.88■□□□□ 0.29
RAB40B-204ENST00000571554 RCAN3Q9UKA8 241 aa16.88■□□□□ 0.29
RAB40B-204ENST00000571554 NDUFB9Q9Y6M9 179 aa16.88■□□□□ 0.29
RAB40B-204ENST00000571554 ZSWIM8A7E2V4 1837 aa16.88■□□□□ 0.29
RAB40B-204ENST00000571554 CYP2E1P05181 493 aaPredicted RBP16.87■□□□□ 0.29
RAB40B-204ENST00000571554 LDHCP07864 332 aa16.87■□□□□ 0.29
RAB40B-204ENST00000571554 SP3Q02447 781 aa16.87■□□□□ 0.29
RAB40B-204ENST00000571554 PPATQ06203 517 aa16.87■□□□□ 0.29
RAB40B-204ENST00000571554 ZFYVE28Q9HCC9 887 aa16.87■□□□□ 0.29
RAB40B-204ENST00000571554 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.87■□□□□ 0.29
RAB40B-204ENST00000571554 PHF20L1A8MW92 1017 aa16.86■□□□□ 0.29
RAB40B-204ENST00000571554 RGS19P49795 217 aa16.86■□□□□ 0.29
RAB40B-204ENST00000571554 NAA16Q6N069 864 aaPredicted RBP16.86■□□□□ 0.29
RAB40B-204ENST00000571554 CCDC84Q86UT8 332 aaPredicted RBP16.86■□□□□ 0.29
RAB40B-204ENST00000571554 SH3RF3Q8TEJ3 882 aaPredicted RBP16.86■□□□□ 0.29
RAB40B-204ENST00000571554 ERO1AQ96HE7 468 aa16.86■□□□□ 0.29
RAB40B-204ENST00000571554 IL1RAPL2Q9NP60 686 aa16.86■□□□□ 0.29
RAB40B-204ENST00000571554 PIH1D3Q9NQM4 214 aaKnown RBP16.86■□□□□ 0.29
RAB40B-204ENST00000571554 AATFQ9NY61 560 aaKnown RBP eCLIP16.86■□□□□ 0.29
RAB40B-204ENST00000571554 DOCK1Q14185 1865 aa16.85■□□□□ 0.29
RAB40B-204ENST00000571554 NOL9Q5SY16 702 aaKnown RBP16.85■□□□□ 0.29
RAB40B-204ENST00000571554 ADGRA1Q86SQ6 560 aa16.85■□□□□ 0.29
RAB40B-204ENST00000571554 AACSQ86V21 672 aa16.85■□□□□ 0.29
RAB40B-204ENST00000571554 TEX11Q8IYF3 940 aa16.85■□□□□ 0.29
RAB40B-204ENST00000571554 MS4A1P11836 297 aa16.84■□□□□ 0.29
RAB40B-204ENST00000571554 C20orf194Q5TEA3 1177 aa16.84■□□□□ 0.29
RAB40B-204ENST00000571554 SCYL3Q8IZE3 742 aa16.84■□□□□ 0.29
RAB40B-204ENST00000571554 NOL10Q9BSC4 688 aaKnown RBP16.84■□□□□ 0.29
RAB40B-204ENST00000571554 EFCC1Q9HA90 598 aa16.84■□□□□ 0.29
RAB40B-204ENST00000571554 HTTP42858 3142 aa16.84■□□□□ 0.29
RAB40B-204ENST00000571554 CDK5RAP2Q96SN8 1893 aa16.84■□□□□ 0.29
RAB40B-204ENST00000571554 SIRT2Q8IXJ6 389 aa16.83■□□□□ 0.28
RAB40B-204ENST00000571554 ARHGAP39Q9C0H5 1083 aa16.83■□□□□ 0.28
RAB40B-204ENST00000571554 OSBPL5Q9H0X9 879 aaPredicted RBP16.83■□□□□ 0.28
RAB40B-204ENST00000571554 PICK1Q9NRD5 415 aa16.83■□□□□ 0.28
RAB40B-204ENST00000571554 DDX19BQ9UMR2 479 aa16.83■□□□□ 0.28
RAB40B-204ENST00000571554 KCNH4Q9UQ05 1017 aa16.83■□□□□ 0.28
RAB40B-204ENST00000571554 ZHX2Q9Y6X8 837 aa16.83■□□□□ 0.28
RAB40B-204ENST00000571554 PHIPQ8WWQ0 1821 aa16.82■□□□□ 0.28
RAB40B-204ENST00000571554 PDHXO00330 501 aa16.82■□□□□ 0.28
RAB40B-204ENST00000571554 IDH1O75874 414 aaKnown RBP16.82■□□□□ 0.28
RAB40B-204ENST00000571554 PTPRAP18433 802 aa16.82■□□□□ 0.28
RAB40B-204ENST00000571554 MOGSQ13724 837 aa16.82■□□□□ 0.28
RAB40B-204ENST00000571554 ERC1Q8IUD2 1116 aa16.82■□□□□ 0.28
RAB40B-204ENST00000571554 RHPN1Q8TCX5 695 aa16.82■□□□□ 0.28
RAB40B-204ENST00000571554 ANTXR1Q9H6X2 564 aa16.82■□□□□ 0.28
RAB40B-204ENST00000571554 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.82■□□□□ 0.28
RAB40B-204ENST00000571554 ZBTB40Q9NUA8 1239 aa16.82■□□□□ 0.28
RAB40B-204ENST00000571554 CPA4Q9UI42 421 aa16.82■□□□□ 0.28
RAB40B-204ENST00000571554 PTPN22Q9Y2R2 807 aa16.82■□□□□ 0.28
RAB40B-204ENST00000571554 SIPA1L1O43166 1804 aa16.82■□□□□ 0.28
RAB40B-204ENST00000571554 ATAD5Q96QE3 1844 aa16.82■□□□□ 0.28
RAB40B-204ENST00000571554 TNRC18O15417 2968 aaPredicted RBP16.81■□□□□ 0.28
RAB40B-204ENST00000571554 TLR2O60603 784 aa16.81■□□□□ 0.28
RAB40B-204ENST00000571554 DYNLL1P63167 89 aaKnown RBP16.81■□□□□ 0.28
RAB40B-204ENST00000571554 SLC4A8Q2Y0W8 1093 aa16.81■□□□□ 0.28
RAB40B-204ENST00000571554 MAPKAPK5Q8IW41 473 aa16.81■□□□□ 0.28
RAB40B-204ENST00000571554 TGFBRAP1Q8WUH2 860 aa16.81■□□□□ 0.28
RAB40B-204ENST00000571554 ZNF512BQ96KM6 892 aaPredicted RBP16.81■□□□□ 0.28
RAB40B-204ENST00000571554 PTPRFP10586 1907 aa16.8■□□□□ 0.28
RAB40B-204ENST00000571554 FOCADQ5VW36 1801 aa16.8■□□□□ 0.28
RAB40B-204ENST00000571554 TRIM75PA6NK02 468 aa16.8■□□□□ 0.28
RAB40B-204ENST00000571554 BAG3O95817 575 aa16.8■□□□□ 0.28
RAB40B-204ENST00000571554 CYP7A1P22680 504 aa16.8■□□□□ 0.28
RAB40B-204ENST00000571554 MAP3K10Q02779 954 aa16.8■□□□□ 0.28
RAB40B-204ENST00000571554 GADL1Q6ZQY3 521 aa16.8■□□□□ 0.28
RAB40B-204ENST00000571554 ANKRD23Q86SG2 305 aa16.8■□□□□ 0.28
RAB40B-204ENST00000571554 MIGA1Q8NAN2 632 aa16.8■□□□□ 0.28
RAB40B-204ENST00000571554 SAP30BPQ9UHR5 308 aaKnown RBP16.8■□□□□ 0.28
RAB40B-204ENST00000571554 FLT1P17948 1338 aa16.79■□□□□ 0.28
RAB40B-204ENST00000571554 CTNND1O60716 968 aaKnown RBP16.79■□□□□ 0.28
RAB40B-204ENST00000571554 NPM3O75607 178 aaKnown RBP16.79■□□□□ 0.28
RAB40B-204ENST00000571554 CYP2C8P10632 490 aa16.79■□□□□ 0.28
RAB40B-204ENST00000571554 RRP1BQ14684 758 aaKnown RBP16.79■□□□□ 0.28
RAB40B-204ENST00000571554 HSP90AB4PQ58FF6 505 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms