RNA–Protein interactions for RNA: ENST00000570146.3

TCF4-244, Transcript of transcription factor 4, humanhuman

TSL 2

Gene TCF4, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-244ENST00000570146 PRDM6Q9NQX0 595 aa13□□□□□ -0.33
TCF4-244ENST00000570146 PICK1Q9NRD5 415 aa13□□□□□ -0.33
TCF4-244ENST00000570146 SLC45A1Q9Y2W3 748 aa13□□□□□ -0.33
TCF4-244ENST00000570146 SUGT1Q9Y2Z0 365 aa13□□□□□ -0.33
TCF4-244ENST00000570146 LAMA2P24043 3122 aaKnown RBP13□□□□□ -0.33
TCF4-244ENST00000570146 ATMINO43313 823 aaPredicted RBP12.99□□□□□ -0.33
TCF4-244ENST00000570146 SYN1P17600 705 aa12.99□□□□□ -0.33
TCF4-244ENST00000570146 FLIIQ13045 1269 aa12.99□□□□□ -0.33
TCF4-244ENST00000570146 NOL9Q5SY16 702 aaKnown RBP12.99□□□□□ -0.33
TCF4-244ENST00000570146 FAM109BQ6ICB4 259 aaPredicted RBP12.99□□□□□ -0.33
TCF4-244ENST00000570146 LMBR1LQ6UX01 489 aa12.99□□□□□ -0.33
TCF4-244ENST00000570146 DIS3LQ8TF46 1054 aaKnown RBP12.99□□□□□ -0.33
TCF4-244ENST00000570146 FAM151AQ8WW52 585 aa12.99□□□□□ -0.33
TCF4-244ENST00000570146 HMX1Q9NP08 348 aaPredicted RBP12.99□□□□□ -0.33
TCF4-244ENST00000570146 ZNF112Q9UJU3 913 aa12.99□□□□□ -0.33
TCF4-244ENST00000570146 ZSWIM8A7E2V4 1837 aa12.98□□□□□ -0.33
TCF4-244ENST00000570146 HMGCRP04035 888 aa12.98□□□□□ -0.33
TCF4-244ENST00000570146 FOXO4P98177 505 aa12.98□□□□□ -0.33
TCF4-244ENST00000570146 MOGSQ13724 837 aa12.98□□□□□ -0.33
TCF4-244ENST00000570146 GPAT2Q6NUI2 795 aa12.98□□□□□ -0.33
TCF4-244ENST00000570146 GADL1Q6ZQY3 521 aa12.98□□□□□ -0.33
TCF4-244ENST00000570146 TSPYL6Q8N831 410 aa12.98□□□□□ -0.33
TCF4-244ENST00000570146 SLC39A7Q92504 469 aa12.98□□□□□ -0.33
TCF4-244ENST00000570146 PNMA3Q9UL41 463 aa12.98□□□□□ -0.33
TCF4-244ENST00000570146 MROH5Q6ZUA9 1318 aa12.97□□□□□ -0.33
TCF4-244ENST00000570146 TWISTNBQ3B726 338 aaPredicted RBP12.97□□□□□ -0.33
TCF4-244ENST00000570146 APOBEC3HQ6NTF7 200 aaKnown RBP12.97□□□□□ -0.33
TCF4-244ENST00000570146 HHIPL2Q6UWX4 724 aa12.97□□□□□ -0.33
TCF4-244ENST00000570146 SYMPKQ92797 1274 aaKnown RBP12.97□□□□□ -0.33
TCF4-244ENST00000570146 ZNF594Q96JF6 807 aaPredicted RBP12.97□□□□□ -0.33
TCF4-244ENST00000570146 ZHX2Q9Y6X8 837 aa12.97□□□□□ -0.33
TCF4-244ENST00000570146 ARAP2Q8WZ64 1704 aa12.96□□□□□ -0.33
TCF4-244ENST00000570146 A0A0G2JLL6 359 aaPredicted RBP12.96□□□□□ -0.33
TCF4-244ENST00000570146 APAF1O14727 1248 aa12.96□□□□□ -0.33
TCF4-244ENST00000570146 ZEB1P37275 1124 aaPredicted RBP12.96□□□□□ -0.33
TCF4-244ENST00000570146 TCP10Q12799 353 aa12.96□□□□□ -0.33
TCF4-244ENST00000570146 ZNF697Q5TEC3 545 aa12.96□□□□□ -0.33
TCF4-244ENST00000570146 G2E3Q7L622 706 aa12.96□□□□□ -0.33
TCF4-244ENST00000570146 PRRT2Q7Z6L0 340 aaPredicted RBP12.96□□□□□ -0.33
TCF4-244ENST00000570146 IQSEC3Q9UPP2 1182 aaPredicted RBP12.96□□□□□ -0.33
TCF4-244ENST00000570146 POTEMA6NI47 508 aa12.95□□□□□ -0.34
TCF4-244ENST00000570146 C7P10643 843 aa12.95□□□□□ -0.34
TCF4-244ENST00000570146 FBXO33Q7Z6M2 555 aa12.95□□□□□ -0.34
TCF4-244ENST00000570146 SCYL3Q8IZE3 742 aa12.95□□□□□ -0.34
TCF4-244ENST00000570146 ANKRD13CQ8N6S4 541 aa12.95□□□□□ -0.34
TCF4-244ENST00000570146 LBHD1Q9BQE6 289 aaPredicted RBP12.95□□□□□ -0.34
TCF4-244ENST00000570146 TSPYL2Q9H2G4 693 aaPredicted RBP12.95□□□□□ -0.34
TCF4-244ENST00000570146 EYSQ5T1H1 3165 aa12.94□□□□□ -0.34
TCF4-244ENST00000570146 GRIK5Q16478 980 aa12.94□□□□□ -0.34
TCF4-244ENST00000570146 FAM110CQ1W6H9 321 aa12.94□□□□□ -0.34
TCF4-244ENST00000570146 C9orf78Q9NZ63 289 aaPredicted RBP12.94□□□□□ -0.34
TCF4-244ENST00000570146 LRRFIP2Q9Y608 721 aaKnown RBP12.94□□□□□ -0.34
TCF4-244ENST00000570146 SPTBN5Q9NRC6 3674 aaKnown RBP12.93□□□□□ -0.34
TCF4-244ENST00000570146 GRM8O00222 908 aa12.93□□□□□ -0.34
TCF4-244ENST00000570146 PTPRAP18433 802 aa12.93□□□□□ -0.34
TCF4-244ENST00000570146 PABPC4Q13310 644 aaKnown RBP eCLIP12.93□□□□□ -0.34
TCF4-244ENST00000570146 METTL24Q5JXM2 366 aa12.93□□□□□ -0.34
TCF4-244ENST00000570146 WDR66Q8TBY9 1149 aa12.93□□□□□ -0.34
TCF4-244ENST00000570146 TSR2Q969E8 191 aaKnown RBP12.93□□□□□ -0.34
TCF4-244ENST00000570146 FAM161BQ96MY7 647 aa12.93□□□□□ -0.34
TCF4-244ENST00000570146 GUCD1Q96NT3 240 aa12.93□□□□□ -0.34
TCF4-244ENST00000570146 OGDHLQ9ULD0 1010 aa12.93□□□□□ -0.34
TCF4-244ENST00000570146 AGTPBP1Q9UPW5 1226 aa12.93□□□□□ -0.34
TCF4-244ENST00000570146 GCLCP48506 637 aaPredicted RBP12.92□□□□□ -0.34
TCF4-244ENST00000570146 MDM2Q00987 491 aaPredicted RBP12.92□□□□□ -0.34
TCF4-244ENST00000570146 MAFAQ8NHW3 353 aaPredicted RBP12.92□□□□□ -0.34
TCF4-244ENST00000570146 AFG3L2Q9Y4W6 797 aa12.92□□□□□ -0.34
TCF4-244ENST00000570146 PRUNE2Q8WUY3 3088 aa12.91□□□□□ -0.34
TCF4-244ENST00000570146 TRIM75PA6NK02 468 aa12.91□□□□□ -0.34
TCF4-244ENST00000570146 IFIT1P09914 478 aaKnown RBP12.91□□□□□ -0.34
TCF4-244ENST00000570146 CDC42EP5Q6NZY7 148 aa12.91□□□□□ -0.34
TCF4-244ENST00000570146 ZSCAN29Q8IWY8 852 aaPredicted RBP12.91□□□□□ -0.34
TCF4-244ENST00000570146 TRMT44Q8IYL2 757 aaKnown RBP12.91□□□□□ -0.34
TCF4-244ENST00000570146 USP40Q9NVE5 1235 aa12.91□□□□□ -0.34
TCF4-244ENST00000570146 PRKAG2Q9UGJ0 569 aa12.91□□□□□ -0.34
TCF4-244ENST00000570146 CTNND1O60716 968 aaKnown RBP12.9□□□□□ -0.34
TCF4-244ENST00000570146 EPHA10Q5JZY3 1008 aa12.9□□□□□ -0.34
TCF4-244ENST00000570146 BEND3Q5T5X7 828 aa12.9□□□□□ -0.34
TCF4-244ENST00000570146 KIF16BQ96L93 1317 aa12.89□□□□□ -0.35
TCF4-244ENST00000570146 PHF20L1A8MW92 1017 aa12.89□□□□□ -0.35
TCF4-244ENST00000570146 PDE8BO95263 885 aa12.89□□□□□ -0.35
TCF4-244ENST00000570146 COL9A1P20849 921 aa12.89□□□□□ -0.35
TCF4-244ENST00000570146 NFIAQ12857 509 aa12.89□□□□□ -0.35
TCF4-244ENST00000570146 POTEGQ6S5H5 508 aa12.89□□□□□ -0.35
TCF4-244ENST00000570146 PROCA1Q8NCQ7 364 aaPredicted RBP12.89□□□□□ -0.35
TCF4-244ENST00000570146 SOCS4Q8WXH5 440 aa12.89□□□□□ -0.35
TCF4-244ENST00000570146 CDX2Q99626 313 aaPredicted RBP12.89□□□□□ -0.35
TCF4-244ENST00000570146 PUS3Q9BZE2 481 aaKnown RBP12.89□□□□□ -0.35
TCF4-244ENST00000570146 DAGLAQ9Y4D2 1042 aa12.89□□□□□ -0.35
TCF4-244ENST00000570146 DNAH12Q6ZR08 3092 aa12.88□□□□□ -0.35
TCF4-244ENST00000570146 PDE3AQ14432 1141 aa12.88□□□□□ -0.35
TCF4-244ENST00000570146 PUM3Q15397 648 aaKnown RBP12.88□□□□□ -0.35
TCF4-244ENST00000570146 CCAR1Q8IX12 1150 aaKnown RBP12.88□□□□□ -0.35
TCF4-244ENST00000570146 TBC1D2Q9BYX2 928 aa12.88□□□□□ -0.35
TCF4-244ENST00000570146 FAM198AQ9UFP1 575 aa12.88□□□□□ -0.35
TCF4-244ENST00000570146 PFASO15067 1338 aa12.88□□□□□ -0.35
TCF4-244ENST00000570146 F6X3S4 739 aa12.87□□□□□ -0.35
TCF4-244ENST00000570146 ENTPD3O75355 529 aa12.87□□□□□ -0.35
TCF4-244ENST00000570146 ALDH1L1O75891 902 aa12.87□□□□□ -0.35
TCF4-244ENST00000570146 LDHBP07195 334 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms