RNA–Protein interactions for RNA: ENST00000569990.2

HCCAT5-201, hepatocellular carcinoma associated transcript 5, humanhuman

TSL 1 (best) BASIC

Gene HCCAT5, Length 1,079 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCAT5-201ENST00000569990 PRKG1Q13976 671 aa11.64□□□□□ -0.55
HCCAT5-201ENST00000569990 TTLL12Q14166 644 aaPredicted RBP11.64□□□□□ -0.55
HCCAT5-201ENST00000569990 B4GALNT3Q6L9W6 998 aa11.64□□□□□ -0.55
HCCAT5-201ENST00000569990 CYP4F22Q6NT55 531 aa11.64□□□□□ -0.55
HCCAT5-201ENST00000569990 ARMC9Q7Z3E5 817 aa11.64□□□□□ -0.55
HCCAT5-201ENST00000569990 PI4K2BQ8TCG2 481 aa11.64□□□□□ -0.55
HCCAT5-201ENST00000569990 CAPNS2Q96L46 248 aa11.64□□□□□ -0.55
HCCAT5-201ENST00000569990 NOL10Q9BSC4 688 aaKnown RBP11.64□□□□□ -0.55
HCCAT5-201ENST00000569990 LNPKQ9C0E8 428 aa11.64□□□□□ -0.55
HCCAT5-201ENST00000569990 AATFQ9NY61 560 aaKnown RBP eCLIP11.64□□□□□ -0.55
HCCAT5-201ENST00000569990 FZD1Q9UP38 647 aa11.64□□□□□ -0.55
HCCAT5-201ENST00000569990 ERC2O15083 957 aa11.63□□□□□ -0.55
HCCAT5-201ENST00000569990 PPP1R12BO60237 982 aaPredicted RBP11.63□□□□□ -0.55
HCCAT5-201ENST00000569990 ENTPD3O75355 529 aa11.63□□□□□ -0.55
HCCAT5-201ENST00000569990 GLRX3O76003 335 aaKnown RBP11.63□□□□□ -0.55
HCCAT5-201ENST00000569990 PDE6AP16499 860 aa11.63□□□□□ -0.55
HCCAT5-201ENST00000569990 ECE1P42892 770 aa11.63□□□□□ -0.55
HCCAT5-201ENST00000569990 NUCB1Q02818 461 aa11.63□□□□□ -0.55
HCCAT5-201ENST00000569990 MAP3K11Q16584 847 aa11.63□□□□□ -0.55
HCCAT5-201ENST00000569990 LDLRAD1Q5T700 205 aa11.63□□□□□ -0.55
HCCAT5-201ENST00000569990 SLC9C2Q5TAH2 1124 aa11.63□□□□□ -0.55
HCCAT5-201ENST00000569990 RGMBQ6NW40 437 aa11.63□□□□□ -0.55
HCCAT5-201ENST00000569990 PAXIP1Q6ZW49 1069 aaPredicted RBP11.63□□□□□ -0.55
HCCAT5-201ENST00000569990 CHD1LQ86WJ1 897 aa11.63□□□□□ -0.55
HCCAT5-201ENST00000569990 ZFPM1Q8IX07 1006 aa11.63□□□□□ -0.55
HCCAT5-201ENST00000569990 JMYQ8N9B5 988 aa11.63□□□□□ -0.55
HCCAT5-201ENST00000569990 SH3RF3Q8TEJ3 882 aaPredicted RBP11.63□□□□□ -0.55
HCCAT5-201ENST00000569990 DDX4Q9NQI0 724 aaKnown RBP11.63□□□□□ -0.55
HCCAT5-201ENST00000569990 PLSCR2Q9NRY7 297 aa11.63□□□□□ -0.55
HCCAT5-201ENST00000569990 STAP2Q9UGK3 403 aa11.63□□□□□ -0.55
HCCAT5-201ENST00000569990 ANGEL1Q9UNK9 670 aaKnown RBP11.63□□□□□ -0.55
HCCAT5-201ENST00000569990 WDR33Q9C0J8 1336 aaKnown RBP11.62□□□□□ -0.55
HCCAT5-201ENST00000569990 TCRBV5S4A2TA0A5A2 114 aa11.62□□□□□ -0.55
HCCAT5-201ENST00000569990 USP2O75604 605 aaPredicted RBP11.62□□□□□ -0.55
HCCAT5-201ENST00000569990 PLCG2P16885 1265 aa11.62□□□□□ -0.55
HCCAT5-201ENST00000569990 ADD2P35612 726 aa11.62□□□□□ -0.55
HCCAT5-201ENST00000569990 MNX1P50219 401 aaPredicted RBP11.62□□□□□ -0.55
HCCAT5-201ENST00000569990 PDE1AP54750 535 aa11.62□□□□□ -0.55
HCCAT5-201ENST00000569990 DYNLL1P63167 89 aaKnown RBP11.62□□□□□ -0.55
HCCAT5-201ENST00000569990 PICALMQ13492 652 aa11.62□□□□□ -0.55
HCCAT5-201ENST00000569990 TEX11Q8IYF3 940 aa11.62□□□□□ -0.55
HCCAT5-201ENST00000569990 HOOK2Q96ED9 719 aa11.62□□□□□ -0.55
HCCAT5-201ENST00000569990 ZNF532Q9HCE3 1301 aa11.61□□□□□ -0.55
HCCAT5-201ENST00000569990 THSD7BQ9C0I4 1608 aa11.61□□□□□ -0.55
HCCAT5-201ENST00000569990 FAM155AB1AL88 458 aaPredicted RBP11.61□□□□□ -0.55
HCCAT5-201ENST00000569990 ZNF157P51786 506 aaPredicted RBP11.61□□□□□ -0.55
HCCAT5-201ENST00000569990 GRM1Q13255 1194 aa11.61□□□□□ -0.55
HCCAT5-201ENST00000569990 SH3BP5LQ7L8J4 393 aa11.61□□□□□ -0.55
HCCAT5-201ENST00000569990 RASAL3Q86YV0 1011 aa11.61□□□□□ -0.55
HCCAT5-201ENST00000569990 CERS3Q8IU89 383 aa11.61□□□□□ -0.55
HCCAT5-201ENST00000569990 KBTBD3Q8NAB2 608 aa11.61□□□□□ -0.55
HCCAT5-201ENST00000569990 MIGA1Q8NAN2 632 aa11.61□□□□□ -0.55
HCCAT5-201ENST00000569990 CCDC102AQ96A19 550 aa11.61□□□□□ -0.55
HCCAT5-201ENST00000569990 RIOK1Q9BRS2 568 aaKnown RBP11.61□□□□□ -0.55
HCCAT5-201ENST00000569990 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.61□□□□□ -0.55
HCCAT5-201ENST00000569990 ATRNL1Q5VV63 1379 aa11.61□□□□□ -0.55
HCCAT5-201ENST00000569990 PCNTO95613 3336 aa11.6□□□□□ -0.55
HCCAT5-201ENST00000569990 COL2A1P02458 1487 aaPredicted RBP11.6□□□□□ -0.55
HCCAT5-201ENST00000569990 DDTLA6NHG4 134 aaPredicted RBP11.6□□□□□ -0.55
HCCAT5-201ENST00000569990 UNCXA6NJT0 531 aa11.6□□□□□ -0.55
HCCAT5-201ENST00000569990 CHGBP05060 677 aa11.6□□□□□ -0.55
HCCAT5-201ENST00000569990 CENPBP07199 599 aaPredicted RBP11.6□□□□□ -0.55
HCCAT5-201ENST00000569990 SLC10A3P09131 477 aa11.6□□□□□ -0.55
HCCAT5-201ENST00000569990 IREB2P48200 963 aaKnown RBP11.6□□□□□ -0.55
HCCAT5-201ENST00000569990 UBE3CQ15386 1083 aa11.6□□□□□ -0.55
HCCAT5-201ENST00000569990 SLFNL1Q499Z3 407 aa11.6□□□□□ -0.55
HCCAT5-201ENST00000569990 DCAF15Q66K64 600 aa11.6□□□□□ -0.55
HCCAT5-201ENST00000569990 ZSCAN29Q8IWY8 852 aaPredicted RBP11.6□□□□□ -0.55
HCCAT5-201ENST00000569990 TGFBRAP1Q8WUH2 860 aa11.6□□□□□ -0.55
HCCAT5-201ENST00000569990 OTUD5Q96G74 571 aa11.6□□□□□ -0.55
HCCAT5-201ENST00000569990 CSRNP1Q96S65 589 aa11.6□□□□□ -0.55
HCCAT5-201ENST00000569990 OSBPL5Q9H0X9 879 aaPredicted RBP11.6□□□□□ -0.55
HCCAT5-201ENST00000569990 FLT1P17948 1338 aa11.6□□□□□ -0.55
HCCAT5-201ENST00000569990 MAGEB6P1A0A0J9YX57 407 aa11.59□□□□□ -0.55
HCCAT5-201ENST00000569990 AOC2O75106 756 aa11.59□□□□□ -0.55
HCCAT5-201ENST00000569990 MAP2K2P36507 400 aa11.59□□□□□ -0.55
HCCAT5-201ENST00000569990 NOGQ13253 232 aa11.59□□□□□ -0.55
HCCAT5-201ENST00000569990 ZSCAN25Q6NSZ9 544 aa11.59□□□□□ -0.55
HCCAT5-201ENST00000569990 MIGA2Q7L4E1 593 aa11.59□□□□□ -0.55
HCCAT5-201ENST00000569990 MAPKAPK5Q8IW41 473 aa11.59□□□□□ -0.55
HCCAT5-201ENST00000569990 ANKRD13AQ8IZ07 590 aa11.59□□□□□ -0.55
HCCAT5-201ENST00000569990 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.59□□□□□ -0.55
HCCAT5-201ENST00000569990 CLMNQ96JQ2 1002 aa11.59□□□□□ -0.55
HCCAT5-201ENST00000569990 POTEB2H3BUK9 544 aa11.58□□□□□ -0.56
HCCAT5-201ENST00000569990 MAP3K9P80192 1104 aa11.58□□□□□ -0.56
HCCAT5-201ENST00000569990 MAP3K10Q02779 954 aa11.58□□□□□ -0.56
HCCAT5-201ENST00000569990 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.58□□□□□ -0.56
HCCAT5-201ENST00000569990 PLEKHM2Q8IWE5 1019 aa11.58□□□□□ -0.56
HCCAT5-201ENST00000569990 LCORLQ8N3X6 602 aa11.58□□□□□ -0.56
HCCAT5-201ENST00000569990 WRNIP1Q96S55 665 aa11.58□□□□□ -0.56
HCCAT5-201ENST00000569990 ZIC5Q96T25 663 aa11.58□□□□□ -0.56
HCCAT5-201ENST00000569990 ZNF341Q9BYN7 854 aa11.58□□□□□ -0.56
HCCAT5-201ENST00000569990 OSBPL3Q9H4L5 887 aa11.58□□□□□ -0.56
HCCAT5-201ENST00000569990 FOCADQ5VW36 1801 aa11.58□□□□□ -0.56
HCCAT5-201ENST00000569990 OTOFQ9HC10 1997 aa11.58□□□□□ -0.56
HCCAT5-201ENST00000569990 CDK5RAP2Q96SN8 1893 aa11.57□□□□□ -0.56
HCCAT5-201ENST00000569990 MYH7P12883 1935 aa11.57□□□□□ -0.56
HCCAT5-201ENST00000569990 MBD4O95243 580 aa11.57□□□□□ -0.56
HCCAT5-201ENST00000569990 ZFYP08048 801 aaPredicted RBP11.57□□□□□ -0.56
HCCAT5-201ENST00000569990 SLURP2P0DP57 97 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms