RNA–Protein interactions for RNA: ENST00000569829.1

RPAP1-212, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 597 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-212ENST00000569829 TBC1D22AQ8WUA7 517 aa12.71□□□□□ -0.37
RPAP1-212ENST00000569829 PARK7Q99497 189 aaKnown RBP12.71□□□□□ -0.37
RPAP1-212ENST00000569829 SRCIN1Q9C0H9 1055 aa12.71□□□□□ -0.37
RPAP1-212ENST00000569829 ZHX2Q9Y6X8 837 aa12.71□□□□□ -0.37
RPAP1-212ENST00000569829 RPAP1Q9BWH6 1393 aaPredicted RBP12.7□□□□□ -0.38
RPAP1-212ENST00000569829 FGFR2P21802 821 aa12.7□□□□□ -0.38
RPAP1-212ENST00000569829 ALDH1L2Q3SY69 923 aa12.7□□□□□ -0.38
RPAP1-212ENST00000569829 FKBP1CQ5VVH2 108 aa12.7□□□□□ -0.38
RPAP1-212ENST00000569829 HHIPL2Q6UWX4 724 aa12.7□□□□□ -0.38
RPAP1-212ENST00000569829 SH3BP5LQ7L8J4 393 aa12.7□□□□□ -0.38
RPAP1-212ENST00000569829 C7orf61Q8IZ16 206 aa12.7□□□□□ -0.38
RPAP1-212ENST00000569829 CDCA7LQ96GN5 454 aa12.7□□□□□ -0.38
RPAP1-212ENST00000569829 MRIQ9BWK5 157 aa12.7□□□□□ -0.38
RPAP1-212ENST00000569829 ATRNL1Q5VV63 1379 aa12.69□□□□□ -0.38
RPAP1-212ENST00000569829 PTPRCP08575 1304 aa12.69□□□□□ -0.38
RPAP1-212ENST00000569829 A0A0G2JLL6 359 aaPredicted RBP12.69□□□□□ -0.38
RPAP1-212ENST00000569829 PHF20L1A8MW92 1017 aa12.69□□□□□ -0.38
RPAP1-212ENST00000569829 CT47B1P0C2W7 299 aaPredicted RBP12.69□□□□□ -0.38
RPAP1-212ENST00000569829 RABL6Q3YEC7 729 aaPredicted RBP12.69□□□□□ -0.38
RPAP1-212ENST00000569829 NOL9Q5SY16 702 aaKnown RBP12.69□□□□□ -0.38
RPAP1-212ENST00000569829 PRRT2Q7Z6L0 340 aaPredicted RBP12.69□□□□□ -0.38
RPAP1-212ENST00000569829 SSH1Q8WYL5 1049 aa12.69□□□□□ -0.38
RPAP1-212ENST00000569829 GDF15Q99988 308 aa12.69□□□□□ -0.38
RPAP1-212ENST00000569829 PAK6Q9NQU5 681 aaPredicted RBP12.69□□□□□ -0.38
RPAP1-212ENST00000569829 USP40Q9NVE5 1235 aa12.69□□□□□ -0.38
RPAP1-212ENST00000569829 PRUNE2Q8WUY3 3088 aa12.69□□□□□ -0.38
RPAP1-212ENST00000569829 CDH23Q9H251 3354 aa12.69□□□□□ -0.38
RPAP1-212ENST00000569829 DNAH12Q6ZR08 3092 aa12.68□□□□□ -0.38
RPAP1-212ENST00000569829 TNPO2O14787 897 aaKnown RBP12.68□□□□□ -0.38
RPAP1-212ENST00000569829 PEX10O60683 326 aa12.68□□□□□ -0.38
RPAP1-212ENST00000569829 PTPRAP18433 802 aa12.68□□□□□ -0.38
RPAP1-212ENST00000569829 MNX1P50219 401 aaPredicted RBP12.68□□□□□ -0.38
RPAP1-212ENST00000569829 TREML2Q5T2D2 321 aa12.68□□□□□ -0.38
RPAP1-212ENST00000569829 DEFB123Q8N688 67 aa12.68□□□□□ -0.38
RPAP1-212ENST00000569829 ANKRD13CQ8N6S4 541 aa12.68□□□□□ -0.38
RPAP1-212ENST00000569829 HOOK2Q96ED9 719 aa12.68□□□□□ -0.38
RPAP1-212ENST00000569829 CRISPLD2Q9H0B8 497 aa12.68□□□□□ -0.38
RPAP1-212ENST00000569829 AFG3L2Q9Y4W6 797 aa12.68□□□□□ -0.38
RPAP1-212ENST00000569829 PTPRFP10586 1907 aa12.68□□□□□ -0.38
RPAP1-212ENST00000569829 MYH13Q9UKX3 1938 aa12.67□□□□□ -0.38
RPAP1-212ENST00000569829 DDTLA6NHG4 134 aaPredicted RBP12.67□□□□□ -0.38
RPAP1-212ENST00000569829 TRIM75PA6NK02 468 aa12.67□□□□□ -0.38
RPAP1-212ENST00000569829 FAM196BA6NMK8 535 aa12.67□□□□□ -0.38
RPAP1-212ENST00000569829 CXCL11O14625 94 aa12.67□□□□□ -0.38
RPAP1-212ENST00000569829 PHIPQ8WWQ0 1821 aa12.67□□□□□ -0.38
RPAP1-212ENST00000569829 A0A1W2PPC1 479 aa12.66□□□□□ -0.38
RPAP1-212ENST00000569829 RFX5P48382 616 aaPredicted RBP12.66□□□□□ -0.38
RPAP1-212ENST00000569829 RGS3P49796 1198 aa12.66□□□□□ -0.38
RPAP1-212ENST00000569829 SCYL3Q8IZE3 742 aa12.66□□□□□ -0.38
RPAP1-212ENST00000569829 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.66□□□□□ -0.38
RPAP1-212ENST00000569829 DDX4Q9NQI0 724 aaKnown RBP12.66□□□□□ -0.38
RPAP1-212ENST00000569829 MAST3O60307 1309 aa12.65□□□□□ -0.38
RPAP1-212ENST00000569829 IFIT1P09914 478 aaKnown RBP12.65□□□□□ -0.38
RPAP1-212ENST00000569829 MAGEA10P43363 369 aaPredicted RBP12.65□□□□□ -0.38
RPAP1-212ENST00000569829 IRF5Q13568 498 aa12.65□□□□□ -0.38
RPAP1-212ENST00000569829 PUM3Q15397 648 aaKnown RBP12.65□□□□□ -0.38
RPAP1-212ENST00000569829 NECAB2Q7Z6G3 386 aa12.65□□□□□ -0.38
RPAP1-212ENST00000569829 PXYLP1Q8TE99 480 aa12.65□□□□□ -0.38
RPAP1-212ENST00000569829 SMCR8Q8TEV9 937 aaPredicted RBP12.65□□□□□ -0.38
RPAP1-212ENST00000569829 COL25A1Q9BXS0 654 aaPredicted RBP12.65□□□□□ -0.38
RPAP1-212ENST00000569829 USP44Q9H0E7 712 aa12.65□□□□□ -0.38
RPAP1-212ENST00000569829 SUGT1Q9Y2Z0 365 aa12.65□□□□□ -0.38
RPAP1-212ENST00000569829 DOCK2Q92608 1830 aa12.65□□□□□ -0.39
RPAP1-212ENST00000569829 PICALMQ13492 652 aa12.64□□□□□ -0.39
RPAP1-212ENST00000569829 RRP1BQ14684 758 aaKnown RBP12.64□□□□□ -0.39
RPAP1-212ENST00000569829 FASTKD5Q7L8L6 764 aaKnown RBP12.64□□□□□ -0.39
RPAP1-212ENST00000569829 ATG9AQ7Z3C6 839 aa12.64□□□□□ -0.39
RPAP1-212ENST00000569829 WDR66Q8TBY9 1149 aa12.64□□□□□ -0.39
RPAP1-212ENST00000569829 SIL1Q9H173 461 aa12.64□□□□□ -0.39
RPAP1-212ENST00000569829 PICK1Q9NRD5 415 aa12.64□□□□□ -0.39
RPAP1-212ENST00000569829 MTMR10Q9NXD2 777 aa12.64□□□□□ -0.39
RPAP1-212ENST00000569829 DDX60LQ5H9U9 1706 aaKnown RBP12.63□□□□□ -0.39
RPAP1-212ENST00000569829 MYH2Q9UKX2 1941 aa12.63□□□□□ -0.39
RPAP1-212ENST00000569829 EYA2O00167 538 aa12.63□□□□□ -0.39
RPAP1-212ENST00000569829 ADORA1P30542 326 aa12.63□□□□□ -0.39
RPAP1-212ENST00000569829 BMP8BP34820 402 aa12.63□□□□□ -0.39
RPAP1-212ENST00000569829 PHKA1P46020 1223 aa12.63□□□□□ -0.39
RPAP1-212ENST00000569829 ZSCAN29Q8IWY8 852 aaPredicted RBP12.63□□□□□ -0.39
RPAP1-212ENST00000569829 GJD2Q9UKL4 321 aa12.63□□□□□ -0.39
RPAP1-212ENST00000569829 LRRFIP2Q9Y608 721 aaKnown RBP12.63□□□□□ -0.39
RPAP1-212ENST00000569829 PFASO15067 1338 aa12.62□□□□□ -0.39
RPAP1-212ENST00000569829 PLXNB2O15031 1838 aa12.62□□□□□ -0.39
RPAP1-212ENST00000569829 DOCK1Q14185 1865 aa12.62□□□□□ -0.39
RPAP1-212ENST00000569829 RFX7Q2KHR2 1363 aa12.62□□□□□ -0.39
RPAP1-212ENST00000569829 LDHBP07195 334 aaKnown RBP12.62□□□□□ -0.39
RPAP1-212ENST00000569829 SLC5A1P13866 664 aa12.62□□□□□ -0.39
RPAP1-212ENST00000569829 LPIN2Q92539 896 aa12.62□□□□□ -0.39
RPAP1-212ENST00000569829 COA7Q96BR5 231 aa12.62□□□□□ -0.39
RPAP1-212ENST00000569829 FAM161BQ96MY7 647 aa12.62□□□□□ -0.39
RPAP1-212ENST00000569829 CYP2B6P20813 491 aa12.61□□□□□ -0.39
RPAP1-212ENST00000569829 RARSP54136 660 aaKnown RBP12.61□□□□□ -0.39
RPAP1-212ENST00000569829 SPP2Q13103 211 aa12.61□□□□□ -0.39
RPAP1-212ENST00000569829 TDHQ8IZJ6 230 aa12.61□□□□□ -0.39
RPAP1-212ENST00000569829 TRIB2Q92519 343 aa12.61□□□□□ -0.39
RPAP1-212ENST00000569829 ARHGAP45Q92619 1136 aa12.61□□□□□ -0.39
RPAP1-212ENST00000569829 IDI2Q9BXS1 227 aa12.61□□□□□ -0.39
RPAP1-212ENST00000569829 C11orf49Q9H6J7 331 aa12.61□□□□□ -0.39
RPAP1-212ENST00000569829 SMC4Q9NTJ3 1288 aa12.61□□□□□ -0.39
RPAP1-212ENST00000569829 AGTPBP1Q9UPW5 1226 aa12.61□□□□□ -0.39
RPAP1-212ENST00000569829 STXBP5LQ9Y2K9 1186 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms