RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 PI4K2BQ8TCG2 481 aa9.35□□□□□ -0.91
CHD9-220ENST00000569794 PCOLCE2Q9UKZ9 415 aa9.35□□□□□ -0.91
CHD9-220ENST00000569794 FARP2O94887 1054 aaPredicted RBP9.34□□□□□ -0.91
CHD9-220ENST00000569794 NEFMP07197 916 aa9.34□□□□□ -0.91
CHD9-220ENST00000569794 AOC3Q16853 763 aa9.34□□□□□ -0.91
CHD9-220ENST00000569794 EPS8L3Q8TE67 593 aaKnown RBP9.34□□□□□ -0.91
CHD9-220ENST00000569794 TMEM40Q8WWA1 233 aa9.34□□□□□ -0.91
CHD9-220ENST00000569794 HRASLS5Q96KN8 279 aa9.34□□□□□ -0.91
CHD9-220ENST00000569794 TMEM39AQ9NV64 488 aa9.34□□□□□ -0.91
CHD9-220ENST00000569794 PLAGL2Q9UPG8 496 aa9.34□□□□□ -0.91
CHD9-220ENST00000569794 PPP2R3AQ06190 1150 aa9.33□□□□□ -0.92
CHD9-220ENST00000569794 DTHD1Q6ZMT9 781 aa9.33□□□□□ -0.92
CHD9-220ENST00000569794 ARHGAP27Q6ZUM4 889 aa9.33□□□□□ -0.92
CHD9-220ENST00000569794 TMC1Q8TDI8 760 aa9.33□□□□□ -0.92
CHD9-220ENST00000569794 CSRNP1Q96S65 589 aa9.33□□□□□ -0.92
CHD9-220ENST00000569794 TMEM265A0A087WTH1 108 aa9.32□□□□□ -0.92
CHD9-220ENST00000569794 DBX1A6NMT0 343 aa9.32□□□□□ -0.92
CHD9-220ENST00000569794 KCNB2Q92953 911 aa9.32□□□□□ -0.92
CHD9-220ENST00000569794 ISL2Q96A47 359 aa9.32□□□□□ -0.92
CHD9-220ENST00000569794 GPN3Q9UHW5 284 aaPredicted RBP9.32□□□□□ -0.92
CHD9-220ENST00000569794 FCGRTP55899 365 aa9.31□□□□□ -0.92
CHD9-220ENST00000569794 ZC3H12AQ5D1E8 599 aaKnown RBP9.31□□□□□ -0.92
CHD9-220ENST00000569794 TOP6BLQ8N6T0 577 aa9.31□□□□□ -0.92
CHD9-220ENST00000569794 STK35Q8TDR2 534 aa9.31□□□□□ -0.92
CHD9-220ENST00000569794 KRTAP4-9Q9BYQ8 210 aa9.31□□□□□ -0.92
CHD9-220ENST00000569794 ANGEL2Q5VTE6 544 aaKnown RBP9.3□□□□□ -0.92
CHD9-220ENST00000569794 SULF2Q8IWU5 870 aa9.3□□□□□ -0.92
CHD9-220ENST00000569794 ALKBH8Q96BT7 664 aaKnown RBP9.3□□□□□ -0.92
CHD9-220ENST00000569794 TNKS2Q9H2K2 1166 aa9.3□□□□□ -0.92
CHD9-220ENST00000569794 ITIH2P19823 946 aa9.29□□□□□ -0.92
CHD9-220ENST00000569794 ERVK-24P63145 666 aa9.29□□□□□ -0.92
CHD9-220ENST00000569794 PKN1Q16512 942 aa9.29□□□□□ -0.92
CHD9-220ENST00000569794 LCE4AQ5TA78 99 aa9.29□□□□□ -0.92
CHD9-220ENST00000569794 SLC23A3Q6PIS1 610 aa9.29□□□□□ -0.92
CHD9-220ENST00000569794 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.29□□□□□ -0.92
CHD9-220ENST00000569794 RNF214Q8ND24 703 aa9.29□□□□□ -0.92
CHD9-220ENST00000569794 DMRTB1Q96MA1 342 aa9.29□□□□□ -0.92
CHD9-220ENST00000569794 HEXIM2Q96MH2 286 aaKnown RBP9.29□□□□□ -0.92
CHD9-220ENST00000569794 SSU72Q9NP77 194 aaKnown RBP9.29□□□□□ -0.92
CHD9-220ENST00000569794 XRCC5P13010 732 aaKnown RBP9.28□□□□□ -0.92
CHD9-220ENST00000569794 ARNTP27540 789 aa9.28□□□□□ -0.92
CHD9-220ENST00000569794 PI16Q6UXB8 463 aa9.28□□□□□ -0.92
CHD9-220ENST00000569794 KSR1Q8IVT5 923 aa9.28□□□□□ -0.92
CHD9-220ENST00000569794 FLAD1Q8NFF5 587 aa9.28□□□□□ -0.92
CHD9-220ENST00000569794 SNX11Q9Y5W9 270 aa9.28□□□□□ -0.92
CHD9-220ENST00000569794 FAM214BQ7L5A3 538 aa9.27□□□□□ -0.93
CHD9-220ENST00000569794 TXNDC2Q86VQ3 553 aa9.27□□□□□ -0.93
CHD9-220ENST00000569794 RBCK1Q9BYM8 510 aa9.27□□□□□ -0.93
CHD9-220ENST00000569794 PPP4R2Q9NY27 417 aa9.27□□□□□ -0.93
CHD9-220ENST00000569794 MAP1SQ66K74 1059 aaPredicted RBP9.26□□□□□ -0.93
CHD9-220ENST00000569794 SPOCD1Q6ZMY3 1216 aa9.26□□□□□ -0.93
CHD9-220ENST00000569794 BCO2Q9BYV7 579 aa9.26□□□□□ -0.93
CHD9-220ENST00000569794 NLRP2Q9NX02 1062 aa9.26□□□□□ -0.93
CHD9-220ENST00000569794 ZNF252P-AS1Q0IIN9 211 aa9.25□□□□□ -0.93
CHD9-220ENST00000569794 GPBAR1Q8TDU6 330 aa9.25□□□□□ -0.93
CHD9-220ENST00000569794 PRDM7Q9NQW5 492 aa9.25□□□□□ -0.93
CHD9-220ENST00000569794 CACNA2D2Q9NY47 1150 aa9.25□□□□□ -0.93
CHD9-220ENST00000569794 NME2P22392 152 aa9.24□□□□□ -0.93
CHD9-220ENST00000569794 MESP2Q0VG99 397 aa9.24□□□□□ -0.93
CHD9-220ENST00000569794 FBLN7Q53RD9 439 aa9.24□□□□□ -0.93
CHD9-220ENST00000569794 SLC38A3Q99624 504 aa9.24□□□□□ -0.93
CHD9-220ENST00000569794 IGF2BP3O00425 579 aaKnown RBP eCLIP9.23□□□□□ -0.93
CHD9-220ENST00000569794 ZSWIM9Q86XI8 627 aa9.23□□□□□ -0.93
CHD9-220ENST00000569794 SPACA3Q8IXA5 215 aa9.23□□□□□ -0.93
CHD9-220ENST00000569794 ASB11Q8WXH4 323 aa9.23□□□□□ -0.93
CHD9-220ENST00000569794 EMILIN2Q9BXX0 1053 aa9.23□□□□□ -0.93
CHD9-220ENST00000569794 PRDM10Q9NQV6 1147 aa9.23□□□□□ -0.93
CHD9-220ENST00000569794 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.23□□□□□ -0.93
CHD9-220ENST00000569794 GTF2IRD1Q9UHL9 959 aa9.23□□□□□ -0.93
CHD9-220ENST00000569794 AKAP2Q9Y2D5 859 aa9.23□□□□□ -0.93
CHD9-220ENST00000569794 NTF4P34130 210 aa9.22□□□□□ -0.93
CHD9-220ENST00000569794 IKZF1Q13422 519 aa9.22□□□□□ -0.93
CHD9-220ENST00000569794 ACSBG1Q96GR2 724 aa9.22□□□□□ -0.93
CHD9-220ENST00000569794 FAM84AQ96KN4 292 aa9.22□□□□□ -0.93
CHD9-220ENST00000569794 GTF3C3Q9Y5Q9 886 aa9.22□□□□□ -0.93
CHD9-220ENST00000569794 ZNF503-AS2A6NEH8 195 aa9.21□□□□□ -0.94
CHD9-220ENST00000569794 LRRC10BA6NIK2 292 aa9.21□□□□□ -0.94
CHD9-220ENST00000569794 ZP2Q05996 745 aa9.21□□□□□ -0.94
CHD9-220ENST00000569794 PPM1JQ5JR12 505 aa9.21□□□□□ -0.94
CHD9-220ENST00000569794 MPRIPQ6WCQ1 1025 aa9.21□□□□□ -0.94
CHD9-220ENST00000569794 NKPD1Q17RQ9 610 aa9.2□□□□□ -0.94
CHD9-220ENST00000569794 NXPE4Q6UWF7 544 aa9.2□□□□□ -0.94
CHD9-220ENST00000569794 TMC7Q7Z402 723 aa9.2□□□□□ -0.94
CHD9-220ENST00000569794 UBE3DQ7Z6J8 389 aa9.2□□□□□ -0.94
CHD9-220ENST00000569794 BHLHE22Q8NFJ8 381 aaPredicted RBP9.2□□□□□ -0.94
CHD9-220ENST00000569794 CBX8Q9HC52 389 aa9.2□□□□□ -0.94
CHD9-220ENST00000569794 FAM53CQ9NYF3 392 aa9.2□□□□□ -0.94
CHD9-220ENST00000569794 CSADQ9Y600 493 aa9.2□□□□□ -0.94
CHD9-220ENST00000569794 RING1Q06587 406 aa9.19□□□□□ -0.94
CHD9-220ENST00000569794 KCNMB1Q16558 191 aa9.19□□□□□ -0.94
CHD9-220ENST00000569794 C3orf58Q8NDZ4 430 aa9.19□□□□□ -0.94
CHD9-220ENST00000569794 NECAB3Q96P71 396 aaPredicted RBP9.19□□□□□ -0.94
CHD9-220ENST00000569794 CTNND2Q9UQB3 1225 aa9.19□□□□□ -0.94
CHD9-220ENST00000569794 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.18□□□□□ -0.94
CHD9-220ENST00000569794 GRIN3AQ8TCU5 1115 aa9.18□□□□□ -0.94
CHD9-220ENST00000569794 PITPNM2Q9BZ72 1349 aa9.18□□□□□ -0.94
CHD9-220ENST00000569794 EOMESO95936 686 aa9.17□□□□□ -0.94
CHD9-220ENST00000569794 BMP6P22004 513 aa9.17□□□□□ -0.94
CHD9-220ENST00000569794 CLCN7P51798 805 aa9.17□□□□□ -0.94
CHD9-220ENST00000569794 MLANAQ16655 118 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms