RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 COL4A5P29400 1685 aa12.89□□□□□ -0.35
PDXDC1-216ENST00000569715 PPFIA3O75145 1194 aa12.89□□□□□ -0.35
PDXDC1-216ENST00000569715 SYT1P21579 422 aa12.89□□□□□ -0.35
PDXDC1-216ENST00000569715 PPP4CP60510 307 aa12.89□□□□□ -0.35
PDXDC1-216ENST00000569715 ZKSCAN3Q9BRR0 538 aa12.89□□□□□ -0.35
PDXDC1-216ENST00000569715 DAGLAQ9Y4D2 1042 aa12.89□□□□□ -0.35
PDXDC1-216ENST00000569715 GPR75-ASB3A0A0A6YYF3 556 aa12.88□□□□□ -0.35
PDXDC1-216ENST00000569715 KLF18A0A0U1RQI7 1052 aa12.88□□□□□ -0.35
PDXDC1-216ENST00000569715 PRDM1O75626 825 aa12.88□□□□□ -0.35
PDXDC1-216ENST00000569715 LDHCP07864 332 aa12.88□□□□□ -0.35
PDXDC1-216ENST00000569715 EVCP57679 992 aa12.88□□□□□ -0.35
PDXDC1-216ENST00000569715 TGFBRAP1Q8WUH2 860 aa12.88□□□□□ -0.35
PDXDC1-216ENST00000569715 FOCADQ5VW36 1801 aa12.88□□□□□ -0.35
PDXDC1-216ENST00000569715 IGSF3O75054 1194 aa12.88□□□□□ -0.35
PDXDC1-216ENST00000569715 CTDNEP1O95476 244 aa12.88□□□□□ -0.35
PDXDC1-216ENST00000569715 BAG3O95817 575 aa12.88□□□□□ -0.35
PDXDC1-216ENST00000569715 USP5P45974 858 aa12.88□□□□□ -0.35
PDXDC1-216ENST00000569715 SCNN1DP51172 638 aa12.88□□□□□ -0.35
PDXDC1-216ENST00000569715 PODNQ7Z5L7 613 aa12.88□□□□□ -0.35
PDXDC1-216ENST00000569715 IGDCC4Q8TDY8 1250 aa12.88□□□□□ -0.35
PDXDC1-216ENST00000569715 CNNM2Q9H8M5 875 aa12.88□□□□□ -0.35
PDXDC1-216ENST00000569715 MCM9Q9NXL9 1143 aa12.88□□□□□ -0.35
PDXDC1-216ENST00000569715 PPP1R1BQ9UD71 204 aaPredicted RBP12.88□□□□□ -0.35
PDXDC1-216ENST00000569715 ANGEL1Q9UNK9 670 aaKnown RBP12.88□□□□□ -0.35
PDXDC1-216ENST00000569715 HPS5Q9UPZ3 1129 aa12.88□□□□□ -0.35
PDXDC1-216ENST00000569715 BAG4O95429 457 aaKnown RBP12.88□□□□□ -0.35
PDXDC1-216ENST00000569715 POLD1P28340 1107 aa12.88□□□□□ -0.35
PDXDC1-216ENST00000569715 KIAA2012Q0VF49 1180 aa12.88□□□□□ -0.35
PDXDC1-216ENST00000569715 KRT23Q9C075 422 aa12.88□□□□□ -0.35
PDXDC1-216ENST00000569715 TTF2Q9UNY4 1162 aaKnown RBP12.88□□□□□ -0.35
PDXDC1-216ENST00000569715 GOLGA8BA8MQT2 603 aa12.87□□□□□ -0.35
PDXDC1-216ENST00000569715 RHBDL3P58872 404 aa12.87□□□□□ -0.35
PDXDC1-216ENST00000569715 CC2D2BQ6DHV5 1058 aa12.87□□□□□ -0.35
PDXDC1-216ENST00000569715 MAPKAPK5Q8IW41 473 aa12.87□□□□□ -0.35
PDXDC1-216ENST00000569715 ZNF274Q96GC6 653 aaPredicted RBP12.87□□□□□ -0.35
PDXDC1-216ENST00000569715 NOL10Q9BSC4 688 aaKnown RBP12.87□□□□□ -0.35
PDXDC1-216ENST00000569715 LY9Q9HBG7 655 aa12.87□□□□□ -0.35
PDXDC1-216ENST00000569715 PPIP5K2O43314 1243 aa12.87□□□□□ -0.35
PDXDC1-216ENST00000569715 CCDC93Q567U6 631 aa12.87□□□□□ -0.35
PDXDC1-216ENST00000569715 SGIP1Q9BQI5 828 aa12.87□□□□□ -0.35
PDXDC1-216ENST00000569715 UTRNP46939 3433 aa12.87□□□□□ -0.35
PDXDC1-216ENST00000569715 MYH1P12882 1939 aa12.87□□□□□ -0.35
PDXDC1-216ENST00000569715 YDJCA8MPS7 323 aa12.86□□□□□ -0.35
PDXDC1-216ENST00000569715 STX6O43752 255 aa12.86□□□□□ -0.35
PDXDC1-216ENST00000569715 RXRAP19793 462 aa12.86□□□□□ -0.35
PDXDC1-216ENST00000569715 KLHL34Q8N239 644 aa12.86□□□□□ -0.35
PDXDC1-216ENST00000569715 NSUN7Q8NE18 718 aaKnown RBP12.86□□□□□ -0.35
PDXDC1-216ENST00000569715 DDX11Q96FC9 970 aa12.86□□□□□ -0.35
PDXDC1-216ENST00000569715 FAM163AQ96GL9 167 aaPredicted RBP12.86□□□□□ -0.35
PDXDC1-216ENST00000569715 GBP4Q96PP9 640 aa12.86□□□□□ -0.35
PDXDC1-216ENST00000569715 RNF41Q9H4P4 317 aaPredicted RBP12.86□□□□□ -0.35
PDXDC1-216ENST00000569715 ARPP21Q9UBL0 812 aaPredicted RBP12.86□□□□□ -0.35
PDXDC1-216ENST00000569715 SAP30BPQ9UHR5 308 aaKnown RBP12.86□□□□□ -0.35
PDXDC1-216ENST00000569715 TMEM67Q5HYA8 995 aa12.86□□□□□ -0.35
PDXDC1-216ENST00000569715 FOXD4L6Q3SYB3 417 aaPredicted RBP12.86□□□□□ -0.35
PDXDC1-216ENST00000569715 DACT2Q5SW24 774 aa12.86□□□□□ -0.35
PDXDC1-216ENST00000569715 FOXD4L3Q6VB84 417 aaPredicted RBP12.86□□□□□ -0.35
PDXDC1-216ENST00000569715 CLEC17AQ6ZS10 378 aa12.86□□□□□ -0.35
PDXDC1-216ENST00000569715 TEX11Q8IYF3 940 aa12.86□□□□□ -0.35
PDXDC1-216ENST00000569715 TMEM87BQ96K49 555 aa12.86□□□□□ -0.35
PDXDC1-216ENST00000569715 MYL10Q9BUA6 226 aa12.86□□□□□ -0.35
PDXDC1-216ENST00000569715 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.86□□□□□ -0.35
PDXDC1-216ENST00000569715 PCDHAC2Q9Y5I4 1007 aa12.86□□□□□ -0.35
PDXDC1-216ENST00000569715 PSME4Q14997 1843 aa12.86□□□□□ -0.35
PDXDC1-216ENST00000569715 IFIT3O14879 490 aaKnown RBP12.85□□□□□ -0.35
PDXDC1-216ENST00000569715 SBK1Q52WX2 424 aa12.85□□□□□ -0.35
PDXDC1-216ENST00000569715 ZNF277Q9NRM2 450 aaPredicted RBP12.85□□□□□ -0.35
PDXDC1-216ENST00000569715 SUGT1Q9Y2Z0 365 aa12.85□□□□□ -0.35
PDXDC1-216ENST00000569715 TCHHQ07283 1943 aa12.85□□□□□ -0.35
PDXDC1-216ENST00000569715 FGRP09769 529 aa12.85□□□□□ -0.35
PDXDC1-216ENST00000569715 KIAA0825Q8IV33 1275 aa12.85□□□□□ -0.35
PDXDC1-216ENST00000569715 DYNLL2Q96FJ2 89 aa12.85□□□□□ -0.35
PDXDC1-216ENST00000569715 MTMR6Q9Y217 621 aa12.85□□□□□ -0.35
PDXDC1-216ENST00000569715 WDR33Q9C0J8 1336 aaKnown RBP12.85□□□□□ -0.35
PDXDC1-216ENST00000569715 ECM29Q5VYK3 1845 aa12.85□□□□□ -0.35
PDXDC1-216ENST00000569715 PTPDC1A2A3K4 754 aa12.85□□□□□ -0.35
PDXDC1-216ENST00000569715 STRIP1Q5VSL9 837 aa12.85□□□□□ -0.35
PDXDC1-216ENST00000569715 APOA5Q6Q788 366 aa12.85□□□□□ -0.35
PDXDC1-216ENST00000569715 SLF2Q8IX21 1173 aa12.85□□□□□ -0.35
PDXDC1-216ENST00000569715 SMARCC2Q8TAQ2 1214 aa12.85□□□□□ -0.35
PDXDC1-216ENST00000569715 FLT1P17948 1338 aa12.85□□□□□ -0.35
PDXDC1-216ENST00000569715 PTGER2P43116 358 aa12.84□□□□□ -0.35
PDXDC1-216ENST00000569715 TGFB2P61812 414 aa12.84□□□□□ -0.35
PDXDC1-216ENST00000569715 C12orf60Q5U649 245 aa12.84□□□□□ -0.35
PDXDC1-216ENST00000569715 SUPT20HQ8NEM7 779 aa12.84□□□□□ -0.35
PDXDC1-216ENST00000569715 PIM2Q9P1W9 311 aa12.84□□□□□ -0.35
PDXDC1-216ENST00000569715 VPS37CA5D8V6 355 aaPredicted RBP12.84□□□□□ -0.35
PDXDC1-216ENST00000569715 RANBP6O60518 1105 aaKnown RBP12.84□□□□□ -0.35
PDXDC1-216ENST00000569715 ZSCAN22P10073 491 aaPredicted RBP12.84□□□□□ -0.35
PDXDC1-216ENST00000569715 CCDC144CPQ8IYA2 1237 aa12.84□□□□□ -0.35
PDXDC1-216ENST00000569715 RTKN2Q8IZC4 609 aa12.84□□□□□ -0.35
PDXDC1-216ENST00000569715 ESR2Q92731 530 aa12.84□□□□□ -0.35
PDXDC1-216ENST00000569715 SRCAPQ6ZRS2 3230 aa12.84□□□□□ -0.35
PDXDC1-216ENST00000569715 USP17L3A6NCW0 530 aa12.84□□□□□ -0.35
PDXDC1-216ENST00000569715 USP17L4A6NCW7 530 aa12.84□□□□□ -0.35
PDXDC1-216ENST00000569715 PLCD1P51178 756 aa12.84□□□□□ -0.35
PDXDC1-216ENST00000569715 LARP1BQ659C4 914 aaKnown RBP12.84□□□□□ -0.35
PDXDC1-216ENST00000569715 MCTP1Q6DN14 999 aa12.84□□□□□ -0.35
PDXDC1-216ENST00000569715 NFXL1Q6ZNB6 911 aa12.84□□□□□ -0.35
PDXDC1-216ENST00000569715 CDC37L1Q7L3B6 337 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms