RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 PPP4CP60510 307 aa9.03□□□□□ -0.96
CDH13-214ENST00000569455 FKBP1AP62942 108 aaKnown RBP9.03□□□□□ -0.96
CDH13-214ENST00000569455 DYNLL1P63167 89 aaKnown RBP9.03□□□□□ -0.96
CDH13-214ENST00000569455 CUL4AQ13619 759 aa9.03□□□□□ -0.96
CDH13-214ENST00000569455 AOC3Q16853 763 aa9.03□□□□□ -0.96
CDH13-214ENST00000569455 STOX1Q6ZVD7 989 aa9.03□□□□□ -0.96
CDH13-214ENST00000569455 AMOTL1Q8IY63 956 aa9.03□□□□□ -0.96
CDH13-214ENST00000569455 ZNF384Q8TF68 577 aa9.03□□□□□ -0.96
CDH13-214ENST00000569455 CHMP4CQ96CF2 233 aa9.03□□□□□ -0.96
CDH13-214ENST00000569455 RNF41Q9H4P4 317 aaPredicted RBP9.03□□□□□ -0.96
CDH13-214ENST00000569455 CNNM2Q9H8M5 875 aa9.03□□□□□ -0.96
CDH13-214ENST00000569455 EPB41L4AQ9HCS5 686 aaPredicted RBP9.03□□□□□ -0.96
CDH13-214ENST00000569455 ATP8A2Q9NTI2 1148 aa9.03□□□□□ -0.96
CDH13-214ENST00000569455 TAF6LQ9Y6J9 622 aa9.03□□□□□ -0.96
CDH13-214ENST00000569455 SCN4AP35499 1836 aa9.03□□□□□ -0.96
CDH13-214ENST00000569455 CNTNAP1P78357 1384 aa9.02□□□□□ -0.97
CDH13-214ENST00000569455 GPR75-ASB3A0A0A6YYF3 556 aa9.02□□□□□ -0.97
CDH13-214ENST00000569455 CCDC85CA6NKD9 419 aa9.02□□□□□ -0.97
CDH13-214ENST00000569455 SLC3A2P08195 630 aaKnown RBP9.02□□□□□ -0.97
CDH13-214ENST00000569455 PCP11498 1178 aaKnown RBP9.02□□□□□ -0.97
CDH13-214ENST00000569455 RPS12P25398 132 aaKnown RBP9.02□□□□□ -0.97
CDH13-214ENST00000569455 LBX1P52954 281 aa9.02□□□□□ -0.97
CDH13-214ENST00000569455 PPARAQ07869 468 aa9.02□□□□□ -0.97
CDH13-214ENST00000569455 DIXDC1Q155Q3 683 aa9.02□□□□□ -0.97
CDH13-214ENST00000569455 STRIP1Q5VSL9 837 aa9.02□□□□□ -0.97
CDH13-214ENST00000569455 MFSD6Q6ZSS7 791 aa9.02□□□□□ -0.97
CDH13-214ENST00000569455 Q6ZUG5 572 aa9.02□□□□□ -0.97
CDH13-214ENST00000569455 SDR42E1Q8WUS8 393 aa9.02□□□□□ -0.97
CDH13-214ENST00000569455 FAM163AQ96GL9 167 aaPredicted RBP9.02□□□□□ -0.97
CDH13-214ENST00000569455 L3MBTL3Q96JM7 780 aaPredicted RBP9.02□□□□□ -0.97
CDH13-214ENST00000569455 KRT23Q9C075 422 aa9.02□□□□□ -0.97
CDH13-214ENST00000569455 DBNDD1Q9H9R9 158 aa9.02□□□□□ -0.97
CDH13-214ENST00000569455 ARPP21Q9UBL0 812 aaPredicted RBP9.02□□□□□ -0.97
CDH13-214ENST00000569455 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.02□□□□□ -0.97
CDH13-214ENST00000569455 MYO3BQ8WXR4 1341 aa9.02□□□□□ -0.97
CDH13-214ENST00000569455 FOCADQ5VW36 1801 aa9.01□□□□□ -0.97
CDH13-214ENST00000569455 SCN9AQ15858 1988 aa9.01□□□□□ -0.97
CDH13-214ENST00000569455 IQCA1LA6NCM1 817 aa9.01□□□□□ -0.97
CDH13-214ENST00000569455 USP17L3A6NCW0 530 aa9.01□□□□□ -0.97
CDH13-214ENST00000569455 USP17L4A6NCW7 530 aa9.01□□□□□ -0.97
CDH13-214ENST00000569455 MINDY4BA8MYZ0 360 aa9.01□□□□□ -0.97
CDH13-214ENST00000569455 BTDP43251 543 aa9.01□□□□□ -0.97
CDH13-214ENST00000569455 USP5P45974 858 aa9.01□□□□□ -0.97
CDH13-214ENST00000569455 NT5C2P49902 561 aa9.01□□□□□ -0.97
CDH13-214ENST00000569455 EXOSC10Q01780 885 aaKnown RBP9.01□□□□□ -0.97
CDH13-214ENST00000569455 TOB2Q14106 344 aaPredicted RBP9.01□□□□□ -0.97
CDH13-214ENST00000569455 GRIK5Q16478 980 aa9.01□□□□□ -0.97
CDH13-214ENST00000569455 AKNAD1Q5T1N1 836 aa9.01□□□□□ -0.97
CDH13-214ENST00000569455 USP17L1Q7RTZ2 530 aa9.01□□□□□ -0.97
CDH13-214ENST00000569455 TBC1D10CQ8IV04 446 aa9.01□□□□□ -0.97
CDH13-214ENST00000569455 MB21D2Q8IYB1 491 aaPredicted RBP9.01□□□□□ -0.97
CDH13-214ENST00000569455 FBXL16Q8N461 479 aa9.01□□□□□ -0.97
CDH13-214ENST00000569455 STAG1Q8WVM7 1258 aa9.01□□□□□ -0.97
CDH13-214ENST00000569455 DPF2Q92785 391 aa9.01□□□□□ -0.97
CDH13-214ENST00000569455 TCEANC2Q96MN5 208 aa9.01□□□□□ -0.97
CDH13-214ENST00000569455 FOXD4L1Q9NU39 408 aa9.01□□□□□ -0.97
CDH13-214ENST00000569455 ANAPC4Q9UJX5 808 aa9.01□□□□□ -0.97
CDH13-214ENST00000569455 TTF2Q9UNY4 1162 aaKnown RBP9.01□□□□□ -0.97
CDH13-214ENST00000569455 MYH1P12882 1939 aa9.01□□□□□ -0.97
CDH13-214ENST00000569455 GAKO14976 1311 aa9.01□□□□□ -0.97
CDH13-214ENST00000569455 ZNF646O15015 1829 aaPredicted RBP9.01□□□□□ -0.97
CDH13-214ENST00000569455 ECM29Q5VYK3 1845 aa9.01□□□□□ -0.97
CDH13-214ENST00000569455 PRC1O43663 620 aa9□□□□□ -0.97
CDH13-214ENST00000569455 VIL1P09327 827 aaKnown RBP9□□□□□ -0.97
CDH13-214ENST00000569455 DDIT3P35638 169 aa9□□□□□ -0.97
CDH13-214ENST00000569455 NUCB2P80303 420 aa9□□□□□ -0.97
CDH13-214ENST00000569455 HDLBPQ00341 1268 aaKnown RBP9□□□□□ -0.97
CDH13-214ENST00000569455 CXCL9Q07325 125 aa9□□□□□ -0.97
CDH13-214ENST00000569455 SART3Q15020 963 aaKnown RBP9□□□□□ -0.97
CDH13-214ENST00000569455 SBK1Q52WX2 424 aa9□□□□□ -0.97
CDH13-214ENST00000569455 CIAPIN1Q6FI81 312 aa9□□□□□ -0.97
CDH13-214ENST00000569455 HHIPL2Q6UWX4 724 aa9□□□□□ -0.97
CDH13-214ENST00000569455 AGBL3Q8NEM8 1001 aa9□□□□□ -0.97
CDH13-214ENST00000569455 BRF1Q92994 677 aa9□□□□□ -0.97
CDH13-214ENST00000569455 TEKT1Q969V4 418 aa9□□□□□ -0.97
CDH13-214ENST00000569455 TMEM87BQ96K49 555 aa9□□□□□ -0.97
CDH13-214ENST00000569455 MTA3Q9BTC8 594 aa9□□□□□ -0.97
CDH13-214ENST00000569455 MRIQ9BWK5 157 aa9□□□□□ -0.97
CDH13-214ENST00000569455 AGXT2Q9BYV1 514 aa9□□□□□ -0.97
CDH13-214ENST00000569455 NBPF3Q9H094 633 aa9□□□□□ -0.97
CDH13-214ENST00000569455 DCP1AQ9NPI6 582 aaPredicted RBP9□□□□□ -0.97
CDH13-214ENST00000569455 TOMM22Q9NS69 142 aa9□□□□□ -0.97
CDH13-214ENST00000569455 WBP1LQ9NX94 342 aa9□□□□□ -0.97
CDH13-214ENST00000569455 PDE4DIPQ5VU43 2346 aa8.99□□□□□ -0.97
CDH13-214ENST00000569455 USP17L12C9JPN9 530 aa8.99□□□□□ -0.97
CDH13-214ENST00000569455 USP17L21D6R901 530 aa8.99□□□□□ -0.97
CDH13-214ENST00000569455 F8W031 263 aaPredicted RBP8.99□□□□□ -0.97
CDH13-214ENST00000569455 HSPA8P11142 646 aaKnown RBP8.99□□□□□ -0.97
CDH13-214ENST00000569455 PDIA4P13667 645 aaKnown RBP8.99□□□□□ -0.97
CDH13-214ENST00000569455 CTDSPL2Q05D32 466 aa8.99□□□□□ -0.97
CDH13-214ENST00000569455 PDE4BQ07343 736 aa8.99□□□□□ -0.97
CDH13-214ENST00000569455 ME3Q16798 604 aa8.99□□□□□ -0.97
CDH13-214ENST00000569455 DACT2Q5SW24 774 aa8.99□□□□□ -0.97
CDH13-214ENST00000569455 CTR9Q6PD62 1173 aa8.99□□□□□ -0.97
CDH13-214ENST00000569455 TEX11Q8IYF3 940 aa8.99□□□□□ -0.97
CDH13-214ENST00000569455 CERS5Q8N5B7 392 aa8.99□□□□□ -0.97
CDH13-214ENST00000569455 SH3RF3Q8TEJ3 882 aaPredicted RBP8.99□□□□□ -0.97
CDH13-214ENST00000569455 ESR2Q92731 530 aa8.99□□□□□ -0.97
CDH13-214ENST00000569455 MCM9Q9NXL9 1143 aa8.99□□□□□ -0.97
CDH13-214ENST00000569455 TPCN1Q9ULQ1 816 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms