RNA–Protein interactions for RNA: ENST00000569440.5

BBS4-218, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 4

Gene BBS4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-218ENST00000569440 METRNQ9UJH8 293 aa8.09□□□□□ -1.11
BBS4-218ENST00000569440 ZNF112Q9UJU3 913 aa8.09□□□□□ -1.11
BBS4-218ENST00000569440 SLC45A1Q9Y2W3 748 aa8.09□□□□□ -1.11
BBS4-218ENST00000569440 STK24Q9Y6E0 443 aa8.09□□□□□ -1.11
BBS4-218ENST00000569440 C7P10643 843 aa8.08□□□□□ -1.12
BBS4-218ENST00000569440 PDE3AQ14432 1141 aa8.08□□□□□ -1.12
BBS4-218ENST00000569440 NOL9Q5SY16 702 aaKnown RBP8.08□□□□□ -1.12
BBS4-218ENST00000569440 FAM83AQ86UY5 434 aa8.08□□□□□ -1.12
BBS4-218ENST00000569440 HOOK2Q96ED9 719 aa8.08□□□□□ -1.12
BBS4-218ENST00000569440 ZNF341Q9BYN7 854 aa8.08□□□□□ -1.12
BBS4-218ENST00000569440 DBF4Q9UBU7 674 aaPredicted RBP8.08□□□□□ -1.12
BBS4-218ENST00000569440 TIMELESSQ9UNS1 1208 aa8.08□□□□□ -1.12
BBS4-218ENST00000569440 A0A0G2JLL6 359 aaPredicted RBP8.07□□□□□ -1.12
BBS4-218ENST00000569440 SNAP23O00161 211 aa8.07□□□□□ -1.12
BBS4-218ENST00000569440 CRKP46108 304 aa8.07□□□□□ -1.12
BBS4-218ENST00000569440 KRT24Q2M2I5 525 aa8.07□□□□□ -1.12
BBS4-218ENST00000569440 FKBP1CQ5VVH2 108 aa8.07□□□□□ -1.12
BBS4-218ENST00000569440 DCAF15Q66K64 600 aa8.07□□□□□ -1.12
BBS4-218ENST00000569440 MIGA2Q7L4E1 593 aa8.07□□□□□ -1.12
BBS4-218ENST00000569440 FASTKD5Q7L8L6 764 aaKnown RBP8.07□□□□□ -1.12
BBS4-218ENST00000569440 PRRT2Q7Z6L0 340 aaPredicted RBP8.07□□□□□ -1.12
BBS4-218ENST00000569440 IL27Q8NEV9 243 aa8.07□□□□□ -1.12
BBS4-218ENST00000569440 PPM1EQ8WY54 764 aa8.07□□□□□ -1.12
BBS4-218ENST00000569440 TRIB2Q92519 343 aa8.07□□□□□ -1.12
BBS4-218ENST00000569440 ZNF576Q9H609 170 aa8.07□□□□□ -1.12
BBS4-218ENST00000569440 HYPKQ9NX55 129 aa8.07□□□□□ -1.12
BBS4-218ENST00000569440 CWC25Q9NXE8 425 aaPredicted RBP8.07□□□□□ -1.12
BBS4-218ENST00000569440 PRKAG2Q9UGJ0 569 aa8.07□□□□□ -1.12
BBS4-218ENST00000569440 TTF2Q9UNY4 1162 aaKnown RBP8.07□□□□□ -1.12
BBS4-218ENST00000569440 JAG2Q9Y219 1238 aa8.07□□□□□ -1.12
BBS4-218ENST00000569440 OTOFQ9HC10 1997 aa8.06□□□□□ -1.12
BBS4-218ENST00000569440 IGHMBP2P38935 993 aaKnown RBP8.06□□□□□ -1.12
BBS4-218ENST00000569440 KCNJ4P48050 445 aa8.06□□□□□ -1.12
BBS4-218ENST00000569440 CACNB3P54284 484 aa8.06□□□□□ -1.12
BBS4-218ENST00000569440 CHRNDQ07001 517 aa8.06□□□□□ -1.12
BBS4-218ENST00000569440 FAM110CQ1W6H9 321 aa8.06□□□□□ -1.12
BBS4-218ENST00000569440 ANKRD13CQ8N6S4 541 aa8.06□□□□□ -1.12
BBS4-218ENST00000569440 EFCAB3Q8N7B9 438 aa8.06□□□□□ -1.12
BBS4-218ENST00000569440 BADQ92934 168 aa8.06□□□□□ -1.12
BBS4-218ENST00000569440 MYD88Q99836 296 aa8.06□□□□□ -1.12
BBS4-218ENST00000569440 SENP6Q9GZR1 1112 aaPredicted RBP8.06□□□□□ -1.12
BBS4-218ENST00000569440 CXXC1Q9P0U4 656 aaPredicted RBP8.06□□□□□ -1.12
BBS4-218ENST00000569440 HOXB7P09629 217 aa8.05□□□□□ -1.12
BBS4-218ENST00000569440 XRCC5P13010 732 aaKnown RBP8.05□□□□□ -1.12
BBS4-218ENST00000569440 DNAJB2P25686 324 aa8.05□□□□□ -1.12
BBS4-218ENST00000569440 RTP1P59025 263 aa8.05□□□□□ -1.12
BBS4-218ENST00000569440 HDLBPQ00341 1268 aaKnown RBP8.05□□□□□ -1.12
BBS4-218ENST00000569440 CACNB2Q08289 660 aaPredicted RBP8.05□□□□□ -1.12
BBS4-218ENST00000569440 MFSD14BQ5SR56 506 aa8.05□□□□□ -1.12
BBS4-218ENST00000569440 IER5LQ5T953 404 aa8.05□□□□□ -1.12
BBS4-218ENST00000569440 HDGFL1Q5TGJ6 251 aa8.05□□□□□ -1.12
BBS4-218ENST00000569440 ZNF804AQ7Z570 1209 aa8.05□□□□□ -1.12
BBS4-218ENST00000569440 SMCR8Q8TEV9 937 aaPredicted RBP8.05□□□□□ -1.12
BBS4-218ENST00000569440 CACNA1AO00555 2505 aa8.05□□□□□ -1.12
BBS4-218ENST00000569440 BDP1A6H8Y1 2624 aa8.05□□□□□ -1.12
BBS4-218ENST00000569440 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.04□□□□□ -1.12
BBS4-218ENST00000569440 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.04□□□□□ -1.12
BBS4-218ENST00000569440 CHL1O00533 1208 aa8.04□□□□□ -1.12
BBS4-218ENST00000569440 TAF5LO75529 589 aa8.04□□□□□ -1.12
BBS4-218ENST00000569440 SEC24BO95487 1268 aa8.04□□□□□ -1.12
BBS4-218ENST00000569440 NEFMP07197 916 aa8.04□□□□□ -1.12
BBS4-218ENST00000569440 CNGB1Q14028 1251 aaPredicted RBP8.04□□□□□ -1.12
BBS4-218ENST00000569440 ADGRE1Q14246 886 aa8.04□□□□□ -1.12
BBS4-218ENST00000569440 GRIK5Q16478 980 aa8.04□□□□□ -1.12
BBS4-218ENST00000569440 TDRD7Q8NHU6 1098 aaKnown RBP8.04□□□□□ -1.12
BBS4-218ENST00000569440 TIFAQ96CG3 184 aa8.04□□□□□ -1.12
BBS4-218ENST00000569440 GAS2L1Q99501 681 aaPredicted RBP8.04□□□□□ -1.12
BBS4-218ENST00000569440 MRIQ9BWK5 157 aa8.04□□□□□ -1.12
BBS4-218ENST00000569440 AFG3L2Q9Y4W6 797 aa8.04□□□□□ -1.12
BBS4-218ENST00000569440 RPAP1Q9BWH6 1393 aaPredicted RBP8.04□□□□□ -1.12
BBS4-218ENST00000569440 SMIM22K7EJ46 135 aa8.03□□□□□ -1.12
BBS4-218ENST00000569440 ITGA6P23229 1130 aa8.03□□□□□ -1.12
BBS4-218ENST00000569440 CCND3P30281 292 aaPredicted RBP8.03□□□□□ -1.12
BBS4-218ENST00000569440 EPHB4P54760 987 aa8.03□□□□□ -1.12
BBS4-218ENST00000569440 NHLH1Q02575 133 aa8.03□□□□□ -1.12
BBS4-218ENST00000569440 CCDC85BQ15834 202 aaPredicted RBP8.03□□□□□ -1.12
BBS4-218ENST00000569440 APOBEC3HQ6NTF7 200 aaKnown RBP8.03□□□□□ -1.12
BBS4-218ENST00000569440 KHSRPQ92945 711 aaKnown RBP eCLIP8.03□□□□□ -1.128e-8■■■□□ 17.7
BBS4-218ENST00000569440 RNPC3Q96LT9 517 aaKnown RBP8.03□□□□□ -1.12
BBS4-218ENST00000569440 MPHOSPH8Q99549 860 aa8.03□□□□□ -1.12
BBS4-218ENST00000569440 METTL22Q9BUU2 404 aaPredicted RBP8.03□□□□□ -1.12
BBS4-218ENST00000569440 PHAXQ9H814 394 aaKnown RBP8.03□□□□□ -1.12
BBS4-218ENST00000569440 ZHX2Q9Y6X8 837 aa8.03□□□□□ -1.12
BBS4-218ENST00000569440 DDX60LQ5H9U9 1706 aaKnown RBP8.03□□□□□ -1.12
BBS4-218ENST00000569440 TRIM43BA6NCK2 446 aa8.02□□□□□ -1.13
BBS4-218ENST00000569440 FAM86C2PA6NEL3 165 aa8.02□□□□□ -1.13
BBS4-218ENST00000569440 PHF20L1A8MW92 1017 aa8.02□□□□□ -1.13
BBS4-218ENST00000569440 PI4K2BG5E9Z4 385 aa8.02□□□□□ -1.13
BBS4-218ENST00000569440 CSF1RP07333 972 aa8.02□□□□□ -1.13
BBS4-218ENST00000569440 PTPRAP18433 802 aa8.02□□□□□ -1.13
BBS4-218ENST00000569440 CYP2B6P20813 491 aa8.02□□□□□ -1.13
BBS4-218ENST00000569440 PPP2R1AP30153 589 aa8.02□□□□□ -1.13
BBS4-218ENST00000569440 GCLCP48506 637 aaPredicted RBP8.02□□□□□ -1.13
BBS4-218ENST00000569440 KCNQ1P51787 676 aa8.02□□□□□ -1.13
BBS4-218ENST00000569440 IRX5P78411 483 aaPredicted RBP8.02□□□□□ -1.13
BBS4-218ENST00000569440 FOXK2Q01167 660 aa8.02□□□□□ -1.13
BBS4-218ENST00000569440 TFF2Q03403 129 aa8.02□□□□□ -1.13
BBS4-218ENST00000569440 GADL1Q6ZQY3 521 aa8.02□□□□□ -1.13
BBS4-218ENST00000569440 TRMT44Q8IYL2 757 aaKnown RBP8.02□□□□□ -1.13
BBS4-218ENST00000569440 USP6NLQ92738 828 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms