RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 DCTPP1Q9H773 170 aa10.99□□□□□ -0.65
GTF3C1-210ENST00000569394 DDX4Q9NQI0 724 aaKnown RBP10.99□□□□□ -0.65
GTF3C1-210ENST00000569394 ZBTB47Q9UFB7 747 aaPredicted RBP10.99□□□□□ -0.65
GTF3C1-210ENST00000569394 PPP2R3BQ9Y5P8 575 aa10.99□□□□□ -0.65
GTF3C1-210ENST00000569394 PCNTO95613 3336 aa10.98□□□□□ -0.65
GTF3C1-210ENST00000569394 SLC10A3P09131 477 aa10.98□□□□□ -0.65
GTF3C1-210ENST00000569394 FKBP1BP68106 108 aa10.98□□□□□ -0.65
GTF3C1-210ENST00000569394 MAP2K1Q02750 393 aaPredicted RBP10.98□□□□□ -0.65
GTF3C1-210ENST00000569394 NOGQ13253 232 aa10.98□□□□□ -0.65
GTF3C1-210ENST00000569394 MAPKAPK5Q8IW41 473 aa10.98□□□□□ -0.65
GTF3C1-210ENST00000569394 TGFBRAP1Q8WUH2 860 aa10.98□□□□□ -0.65
GTF3C1-210ENST00000569394 WRNIP1Q96S55 665 aa10.98□□□□□ -0.65
GTF3C1-210ENST00000569394 SAP30BPQ9UHR5 308 aaKnown RBP10.98□□□□□ -0.65
GTF3C1-210ENST00000569394 GAKO14976 1311 aa10.98□□□□□ -0.65
GTF3C1-210ENST00000569394 PDS5AQ29RF7 1337 aaKnown RBP10.98□□□□□ -0.65
GTF3C1-210ENST00000569394 GPR75-ASB3A0A0A6YYF3 556 aa10.97□□□□□ -0.65
GTF3C1-210ENST00000569394 DDTLA6NHG4 134 aaPredicted RBP10.97□□□□□ -0.65
GTF3C1-210ENST00000569394 WDHD1O75717 1129 aaPredicted RBP10.97□□□□□ -0.65
GTF3C1-210ENST00000569394 TRPA1O75762 1119 aa10.97□□□□□ -0.65
GTF3C1-210ENST00000569394 MAP2K2P36507 400 aa10.97□□□□□ -0.65
GTF3C1-210ENST00000569394 RHBDL3P58872 404 aa10.97□□□□□ -0.65
GTF3C1-210ENST00000569394 MAP3K12Q12852 859 aa10.97□□□□□ -0.65
GTF3C1-210ENST00000569394 SH3BP5LQ7L8J4 393 aa10.97□□□□□ -0.65
GTF3C1-210ENST00000569394 FAM151AQ8WW52 585 aa10.97□□□□□ -0.65
GTF3C1-210ENST00000569394 HHIPL1Q96JK4 782 aa10.97□□□□□ -0.65
GTF3C1-210ENST00000569394 ZNF512BQ96KM6 892 aaPredicted RBP10.97□□□□□ -0.65
GTF3C1-210ENST00000569394 CSRNP1Q96S65 589 aa10.97□□□□□ -0.65
GTF3C1-210ENST00000569394 PAG1Q9NWQ8 432 aa10.97□□□□□ -0.65
GTF3C1-210ENST00000569394 WBP1LQ9NX94 342 aa10.97□□□□□ -0.65
GTF3C1-210ENST00000569394 OTOFQ9HC10 1997 aa10.96□□□□□ -0.65
GTF3C1-210ENST00000569394 BAG3O95817 575 aa10.96□□□□□ -0.65
GTF3C1-210ENST00000569394 IGHDP01880 384 aa10.96□□□□□ -0.65
GTF3C1-210ENST00000569394 INPP5BP32019 993 aa10.96□□□□□ -0.65
GTF3C1-210ENST00000569394 MAP3K9P80192 1104 aa10.96□□□□□ -0.65
GTF3C1-210ENST00000569394 VGLL4Q14135 290 aa10.96□□□□□ -0.65
GTF3C1-210ENST00000569394 LDLRAD1Q5T700 205 aa10.96□□□□□ -0.65
GTF3C1-210ENST00000569394 SLC9C2Q5TAH2 1124 aa10.96□□□□□ -0.65
GTF3C1-210ENST00000569394 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.96□□□□□ -0.65
GTF3C1-210ENST00000569394 FAM83AQ86UY5 434 aa10.96□□□□□ -0.65
GTF3C1-210ENST00000569394 ANKRD13AQ8IZ07 590 aa10.96□□□□□ -0.65
GTF3C1-210ENST00000569394 OPTNQ96CV9 577 aa10.96□□□□□ -0.65
GTF3C1-210ENST00000569394 OTUD5Q96G74 571 aa10.96□□□□□ -0.65
GTF3C1-210ENST00000569394 WNK4Q96J92 1243 aa10.96□□□□□ -0.65
GTF3C1-210ENST00000569394 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.96□□□□□ -0.65
GTF3C1-210ENST00000569394 CSADQ9Y600 493 aa10.96□□□□□ -0.65
GTF3C1-210ENST00000569394 MAST2Q6P0Q8 1798 aa10.95□□□□□ -0.66
GTF3C1-210ENST00000569394 ZNF532Q9HCE3 1301 aa10.95□□□□□ -0.66
GTF3C1-210ENST00000569394 HSPA8P11142 646 aaKnown RBP10.95□□□□□ -0.66
GTF3C1-210ENST00000569394 ATP5JP18859 108 aa10.95□□□□□ -0.66
GTF3C1-210ENST00000569394 GJA5P36382 358 aa10.95□□□□□ -0.66
GTF3C1-210ENST00000569394 USP5P45974 858 aa10.95□□□□□ -0.66
GTF3C1-210ENST00000569394 CTCFP49711 727 aaPredicted RBP10.95□□□□□ -0.66
GTF3C1-210ENST00000569394 SPRYD7Q5W111 196 aa10.95□□□□□ -0.66
GTF3C1-210ENST00000569394 DCAF15Q66K64 600 aa10.95□□□□□ -0.66
GTF3C1-210ENST00000569394 CCDC84Q86UT8 332 aaPredicted RBP10.95□□□□□ -0.66
GTF3C1-210ENST00000569394 ZNF341Q9BYN7 854 aa10.95□□□□□ -0.66
GTF3C1-210ENST00000569394 LNPKQ9C0E8 428 aa10.95□□□□□ -0.66
GTF3C1-210ENST00000569394 PRDM10Q9NQV6 1147 aa10.95□□□□□ -0.66
GTF3C1-210ENST00000569394 ECHDC1Q9NTX5 307 aa10.95□□□□□ -0.66
GTF3C1-210ENST00000569394 RNF186Q9NXI6 227 aa10.95□□□□□ -0.66
GTF3C1-210ENST00000569394 DOCK2Q92608 1830 aa10.94□□□□□ -0.66
GTF3C1-210ENST00000569394 ENTPD3O75355 529 aa10.94□□□□□ -0.66
GTF3C1-210ENST00000569394 TBC1D8O95759 1140 aa10.94□□□□□ -0.66
GTF3C1-210ENST00000569394 PDE6AP16499 860 aa10.94□□□□□ -0.66
GTF3C1-210ENST00000569394 TTF1Q15361 905 aaPredicted RBP10.94□□□□□ -0.66
GTF3C1-210ENST00000569394 FKBP1CQ5VVH2 108 aa10.94□□□□□ -0.66
GTF3C1-210ENST00000569394 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.94□□□□□ -0.66
GTF3C1-210ENST00000569394 FAM163AQ96GL9 167 aaPredicted RBP10.94□□□□□ -0.66
GTF3C1-210ENST00000569394 GPATCH3Q96I76 525 aa10.94□□□□□ -0.66
GTF3C1-210ENST00000569394 IDI2Q9BXS1 227 aa10.94□□□□□ -0.66
GTF3C1-210ENST00000569394 ARMT1Q9H993 441 aa10.94□□□□□ -0.66
GTF3C1-210ENST00000569394 PALD1Q9ULE6 856 aa10.94□□□□□ -0.66
GTF3C1-210ENST00000569394 CIZ1Q9ULV3 898 aaPredicted RBP10.94□□□□□ -0.66
GTF3C1-210ENST00000569394 MAGEB6P1A0A0J9YX57 407 aa10.93□□□□□ -0.66
GTF3C1-210ENST00000569394 CACNB1Q02641 598 aaPredicted RBP10.93□□□□□ -0.66
GTF3C1-210ENST00000569394 MAP3K11Q16584 847 aa10.93□□□□□ -0.66
GTF3C1-210ENST00000569394 HAUS7Q99871 368 aa10.93□□□□□ -0.66
GTF3C1-210ENST00000569394 OSBPL5Q9H0X9 879 aaPredicted RBP10.93□□□□□ -0.66
GTF3C1-210ENST00000569394 RWDD1Q9H446 243 aaPredicted RBP10.93□□□□□ -0.66
GTF3C1-210ENST00000569394 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.93□□□□□ -0.66
GTF3C1-210ENST00000569394 CDK5RAP2Q96SN8 1893 aa10.93□□□□□ -0.66
GTF3C1-210ENST00000569394 CASP8AP2Q9UKL3 1982 aa10.92□□□□□ -0.66
GTF3C1-210ENST00000569394 THSD7BQ9C0I4 1608 aa10.92□□□□□ -0.66
GTF3C1-210ENST00000569394 FLT1P17948 1338 aa10.92□□□□□ -0.66
GTF3C1-210ENST00000569394 PRKAB2O43741 272 aa10.92□□□□□ -0.66
GTF3C1-210ENST00000569394 STK11IPQ8N1F8 1099 aa10.92□□□□□ -0.66
GTF3C1-210ENST00000569394 LCORLQ8N3X6 602 aa10.92□□□□□ -0.66
GTF3C1-210ENST00000569394 CRACR2BQ8N4Y2 399 aaPredicted RBP10.92□□□□□ -0.66
GTF3C1-210ENST00000569394 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.92□□□□□ -0.66
GTF3C1-210ENST00000569394 SDR42E1Q8WUS8 393 aa10.92□□□□□ -0.66
GTF3C1-210ENST00000569394 HOOK2Q96ED9 719 aa10.92□□□□□ -0.66
GTF3C1-210ENST00000569394 TRIM34Q9BYJ4 488 aa10.92□□□□□ -0.66
GTF3C1-210ENST00000569394 SNCAIPQ9Y6H5 919 aa10.92□□□□□ -0.66
GTF3C1-210ENST00000569394 CCL15-CCL14A0A0B4J2E2 113 aa10.91□□□□□ -0.66
GTF3C1-210ENST00000569394 MBD4O95243 580 aa10.91□□□□□ -0.66
GTF3C1-210ENST00000569394 PLCG2P16885 1265 aa10.91□□□□□ -0.66
GTF3C1-210ENST00000569394 MX1P20591 662 aa10.91□□□□□ -0.66
GTF3C1-210ENST00000569394 PPP4CP60510 307 aa10.91□□□□□ -0.66
GTF3C1-210ENST00000569394 EVX2Q03828 476 aa10.91□□□□□ -0.66
GTF3C1-210ENST00000569394 HDAC1Q13547 482 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms