RNA–Protein interactions for RNA: ENST00000569298.1

KARS-211, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 589 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-211ENST00000569298 ARHGAP25P42331 645 aa7.39□□□□□ -1.23
KARS-211ENST00000569298 SMTNP53814 917 aa7.39□□□□□ -1.23
KARS-211ENST00000569298 CLNS1AP54105 237 aaKnown RBP7.39□□□□□ -1.23
KARS-211ENST00000569298 SH3BP2P78314 561 aa7.39□□□□□ -1.23
KARS-211ENST00000569298 IFFO1Q0D2I5 559 aa7.39□□□□□ -1.23
KARS-211ENST00000569298 TTLL7Q6ZT98 887 aa7.39□□□□□ -1.23
KARS-211ENST00000569298 CCDC150Q8NCX0 1101 aa7.39□□□□□ -1.23
KARS-211ENST00000569298 FAM71BQ8TC56 605 aa7.39□□□□□ -1.23
KARS-211ENST00000569298 UBXN4Q92575 508 aa7.39□□□□□ -1.23
KARS-211ENST00000569298 KAT2BQ92831 832 aa7.39□□□□□ -1.23
KARS-211ENST00000569298 MRFAP1L1Q96HT8 127 aa7.39□□□□□ -1.23
KARS-211ENST00000569298 TMX3Q96JJ7 454 aa7.39□□□□□ -1.23
KARS-211ENST00000569298 FAM81BQ96LP2 452 aa7.39□□□□□ -1.23
KARS-211ENST00000569298 ANKRD27Q96NW4 1050 aa7.39□□□□□ -1.23
KARS-211ENST00000569298 PAGR1Q9BTK6 254 aa7.39□□□□□ -1.23
KARS-211ENST00000569298 MMADHCQ9H3L0 296 aaPredicted RBP7.39□□□□□ -1.23
KARS-211ENST00000569298 KIF9Q9HAQ2 790 aa7.39□□□□□ -1.23
KARS-211ENST00000569298 PLB1Q6P1J6 1458 aa7.38□□□□□ -1.23
KARS-211ENST00000569298 MAGI1Q96QZ7 1491 aaPredicted RBP7.38□□□□□ -1.23
KARS-211ENST00000569298 PARD3Q8TEW0 1356 aa7.38□□□□□ -1.23
KARS-211ENST00000569298 EVC2Q86UK5 1308 aa7.38□□□□□ -1.23
KARS-211ENST00000569298 CCDC151A5D8V7 595 aa7.38□□□□□ -1.23
KARS-211ENST00000569298 ENO4A6NNW6 628 aa7.38□□□□□ -1.23
KARS-211ENST00000569298 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.38□□□□□ -1.23
KARS-211ENST00000569298 TMEM232C9JQI7 657 aa7.38□□□□□ -1.23
KARS-211ENST00000569298 EBAG9O00559 213 aa7.38□□□□□ -1.23
KARS-211ENST00000569298 SIAH2O43255 324 aa7.38□□□□□ -1.23
KARS-211ENST00000569298 VIL1P09327 827 aaKnown RBP7.38□□□□□ -1.23
KARS-211ENST00000569298 CCDC159P0C7I6 412 aa7.38□□□□□ -1.23
KARS-211ENST00000569298 ZFXP17010 805 aaPredicted RBP7.38□□□□□ -1.23
KARS-211ENST00000569298 MX1P20591 662 aa7.38□□□□□ -1.23
KARS-211ENST00000569298 RPL13P26373 211 aaKnown RBP7.38□□□□□ -1.23
KARS-211ENST00000569298 HOXA10P31260 410 aaPredicted RBP7.38□□□□□ -1.23
KARS-211ENST00000569298 INPP5BP32019 993 aa7.38□□□□□ -1.23
KARS-211ENST00000569298 IRF5Q13568 498 aa7.38□□□□□ -1.23
KARS-211ENST00000569298 DCTN1Q14203 1278 aa7.38□□□□□ -1.23
KARS-211ENST00000569298 CCDC92Q53HC0 331 aaPredicted RBP7.38□□□□□ -1.23
KARS-211ENST00000569298 CC2D1AQ6P1N0 951 aaPredicted RBP7.38□□□□□ -1.23
KARS-211ENST00000569298 SYNE3Q6ZMZ3 975 aa7.38□□□□□ -1.23
KARS-211ENST00000569298 B4GALNT4Q76KP1 1039 aa7.38□□□□□ -1.23
KARS-211ENST00000569298 RSPH3Q86UC2 560 aa7.38□□□□□ -1.23
KARS-211ENST00000569298 C17orf53Q8N3J3 647 aaPredicted RBP7.38□□□□□ -1.23
KARS-211ENST00000569298 PHC3Q8NDX5 983 aa7.38□□□□□ -1.23
KARS-211ENST00000569298 RTF1Q92541 710 aaKnown RBP7.38□□□□□ -1.23
KARS-211ENST00000569298 RBM41Q96IZ5 413 aaKnown RBP7.38□□□□□ -1.23
KARS-211ENST00000569298 CCDC114Q96M63 670 aa7.38□□□□□ -1.23
KARS-211ENST00000569298 TRAIPQ9BWF2 469 aa7.38□□□□□ -1.23
KARS-211ENST00000569298 YIPF2Q9BWQ6 316 aa7.38□□□□□ -1.23
KARS-211ENST00000569298 MOV10L1Q9BXT6 1211 aaKnown RBP7.38□□□□□ -1.23
KARS-211ENST00000569298 FUT8Q9BYC5 575 aa7.38□□□□□ -1.23
KARS-211ENST00000569298 TSGA10Q9BZW7 698 aa7.38□□□□□ -1.23
KARS-211ENST00000569298 IFT57Q9NWB7 429 aa7.38□□□□□ -1.23
KARS-211ENST00000569298 SWAP70Q9UH65 585 aa7.38□□□□□ -1.23
KARS-211ENST00000569298 EXOC6BQ9Y2D4 811 aa7.38□□□□□ -1.23
KARS-211ENST00000569298 FAN1Q9Y2M0 1017 aa7.38□□□□□ -1.23
KARS-211ENST00000569298 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.38□□□□□ -1.23
KARS-211ENST00000569298 CHD1O14646 1710 aa7.38□□□□□ -1.23
KARS-211ENST00000569298 EPRSP07814 1512 aaKnown RBP7.37□□□□□ -1.23
KARS-211ENST00000569298 NAIPQ13075 1403 aa7.37□□□□□ -1.23
KARS-211ENST00000569298 ZNF644Q9H582 1327 aaPredicted RBP7.37□□□□□ -1.23
KARS-211ENST00000569298 EME2A4GXA9 379 aaPredicted RBP7.37□□□□□ -1.23
KARS-211ENST00000569298 SPDYE3A6NKU9 549 aa7.37□□□□□ -1.23
KARS-211ENST00000569298 POTECB2RU33 542 aa7.37□□□□□ -1.23
KARS-211ENST00000569298 AXIN1O15169 862 aa7.37□□□□□ -1.23
KARS-211ENST00000569298 ZBED4O75132 1171 aa7.37□□□□□ -1.23
KARS-211ENST00000569298 PYGLP06737 847 aa7.37□□□□□ -1.23
KARS-211ENST00000569298 FNTAP49354 379 aa7.37□□□□□ -1.23
KARS-211ENST00000569298 PAPOLAP51003 745 aaKnown RBP7.37□□□□□ -1.23
KARS-211ENST00000569298 SH3BGRP55822 239 aaPredicted RBP7.37□□□□□ -1.23
KARS-211ENST00000569298 ZBED6P86452 979 aa7.37□□□□□ -1.23
KARS-211ENST00000569298 NAA30Q147X3 362 aaPredicted RBP7.37□□□□□ -1.23
KARS-211ENST00000569298 ARHGAP29Q52LW3 1261 aa7.37□□□□□ -1.23
KARS-211ENST00000569298 ZSCAN25Q6NSZ9 544 aa7.37□□□□□ -1.23
KARS-211ENST00000569298 GALNT15Q8N3T1 639 aa7.37□□□□□ -1.23
KARS-211ENST00000569298 PNMA1Q8ND90 353 aa7.37□□□□□ -1.23
KARS-211ENST00000569298 PARD3BQ8TEW8 1205 aa7.37□□□□□ -1.23
KARS-211ENST00000569298 BAP1Q92560 729 aa7.37□□□□□ -1.23
KARS-211ENST00000569298 CUL5Q93034 780 aa7.37□□□□□ -1.23
KARS-211ENST00000569298 PPP2R3CQ969Q6 453 aa7.37□□□□□ -1.23
KARS-211ENST00000569298 DHRS1Q96LJ7 313 aa7.37□□□□□ -1.23
KARS-211ENST00000569298 C16orf45Q96MC5 204 aaPredicted RBP7.37□□□□□ -1.23
KARS-211ENST00000569298 FUCA2Q9BTY2 467 aa7.37□□□□□ -1.23
KARS-211ENST00000569298 PPME1Q9Y570 386 aa7.37□□□□□ -1.23
KARS-211ENST00000569298 PCDHGC5Q9Y5F6 944 aa7.37□□□□□ -1.23
KARS-211ENST00000569298 SAMD9Q5K651 1589 aa7.37□□□□□ -1.23
KARS-211ENST00000569298 LRRC9Q6ZRR7 1453 aa7.36□□□□□ -1.23
KARS-211ENST00000569298 TTC41PQ6P2S7 1318 aa7.36□□□□□ -1.23
KARS-211ENST00000569298 PHLPP2Q6ZVD8 1323 aa7.36□□□□□ -1.23
KARS-211ENST00000569298 KIF3BO15066 747 aa7.36□□□□□ -1.23
KARS-211ENST00000569298 SHOX2O60902 331 aaPredicted RBP7.36□□□□□ -1.23
KARS-211ENST00000569298 F12P00748 615 aaPredicted RBP7.36□□□□□ -1.23
KARS-211ENST00000569298 KCNA2P16389 499 aa7.36□□□□□ -1.23
KARS-211ENST00000569298 AMPHP49418 695 aa7.36□□□□□ -1.23
KARS-211ENST00000569298 MCM2P49736 904 aa7.36□□□□□ -1.23
KARS-211ENST00000569298 USP11P51784 963 aa7.36□□□□□ -1.23
KARS-211ENST00000569298 SLFN5Q08AF3 891 aa7.36□□□□□ -1.23
KARS-211ENST00000569298 VAC14Q08AM6 782 aa7.36□□□□□ -1.23
KARS-211ENST00000569298 APOBRQ0VD83 1088 aa7.36□□□□□ -1.23
KARS-211ENST00000569298 ZNF394Q53GI3 561 aa7.36□□□□□ -1.23
KARS-211ENST00000569298 CLEC4GQ6UXB4 293 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 150.9 ms