RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 PHF20L1A8MW92 1017 aa9.62□□□□□ -0.87
CDH3-209ENST00000569080 NPM3O75607 178 aaKnown RBP9.62□□□□□ -0.87
CDH3-209ENST00000569080 CYP2E1P05181 493 aaPredicted RBP9.62□□□□□ -0.87
CDH3-209ENST00000569080 SLURP2P0DP57 97 aa9.62□□□□□ -0.87
CDH3-209ENST00000569080 CAP1Q01518 475 aa9.62□□□□□ -0.87
CDH3-209ENST00000569080 MAP3K10Q02779 954 aa9.62□□□□□ -0.87
CDH3-209ENST00000569080 CRHR2Q13324 411 aa9.62□□□□□ -0.87
CDH3-209ENST00000569080 OS9Q13438 667 aaPredicted RBP9.62□□□□□ -0.87
CDH3-209ENST00000569080 NOL9Q5SY16 702 aaKnown RBP9.62□□□□□ -0.87
CDH3-209ENST00000569080 GORABQ5T7V8 394 aa9.62□□□□□ -0.87
CDH3-209ENST00000569080 MIGA2Q7L4E1 593 aa9.62□□□□□ -0.87
CDH3-209ENST00000569080 ADGRA1Q86SQ6 560 aa9.62□□□□□ -0.87
CDH3-209ENST00000569080 ERO1BQ86YB8 467 aa9.62□□□□□ -0.87
CDH3-209ENST00000569080 ZNF341Q9BYN7 854 aa9.62□□□□□ -0.87
CDH3-209ENST00000569080 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.62□□□□□ -0.87
CDH3-209ENST00000569080 DDX19BQ9UMR2 479 aa9.62□□□□□ -0.87
CDH3-209ENST00000569080 IRF6O14896 467 aa9.61□□□□□ -0.87
CDH3-209ENST00000569080 MS4A1P11836 297 aa9.61□□□□□ -0.87
CDH3-209ENST00000569080 ZAP70P43403 619 aa9.61□□□□□ -0.87
CDH3-209ENST00000569080 GTF2A2P52657 109 aa9.61□□□□□ -0.87
CDH3-209ENST00000569080 PPIL2Q13356 520 aa9.61□□□□□ -0.87
CDH3-209ENST00000569080 TTC39AQ5SRH9 613 aa9.61□□□□□ -0.87
CDH3-209ENST00000569080 SLF2Q8IX21 1173 aa9.61□□□□□ -0.87
CDH3-209ENST00000569080 FAM43AQ8N2R8 423 aa9.61□□□□□ -0.87
CDH3-209ENST00000569080 CCDC8Q9H0W5 538 aaPredicted RBP9.61□□□□□ -0.87
CDH3-209ENST00000569080 PIH1D3Q9NQM4 214 aaKnown RBP9.61□□□□□ -0.87
CDH3-209ENST00000569080 SNRKQ9NRH2 765 aa9.61□□□□□ -0.87
CDH3-209ENST00000569080 LOC285556D6RIA3 1793 aa9.6□□□□□ -0.87
CDH3-209ENST00000569080 CCL15-CCL14A0A0B4J2E2 113 aa9.6□□□□□ -0.87
CDH3-209ENST00000569080 FKTNO75072 461 aa9.6□□□□□ -0.87
CDH3-209ENST00000569080 MOGSQ13724 837 aa9.6□□□□□ -0.87
CDH3-209ENST00000569080 PDE3AQ14432 1141 aa9.6□□□□□ -0.87
CDH3-209ENST00000569080 CCL15Q16663 113 aa9.6□□□□□ -0.87
CDH3-209ENST00000569080 KCNH4Q9UQ05 1017 aa9.6□□□□□ -0.87
CDH3-209ENST00000569080 ADGRA2Q96PE1 1338 aa9.59□□□□□ -0.87
CDH3-209ENST00000569080 CCDC85CA6NKD9 419 aa9.59□□□□□ -0.87
CDH3-209ENST00000569080 BTBD19C9JJ37 291 aa9.59□□□□□ -0.87
CDH3-209ENST00000569080 IGSF3O75054 1194 aa9.59□□□□□ -0.87
CDH3-209ENST00000569080 MAP4K4O95819 1239 aaPredicted RBP9.59□□□□□ -0.87
CDH3-209ENST00000569080 RGS19P49795 217 aa9.59□□□□□ -0.87
CDH3-209ENST00000569080 GSTO1P78417 241 aa9.59□□□□□ -0.87
CDH3-209ENST00000569080 PPATQ06203 517 aa9.59□□□□□ -0.87
CDH3-209ENST00000569080 PICALMQ13492 652 aa9.59□□□□□ -0.87
CDH3-209ENST00000569080 CCDC158Q5M9N0 1113 aa9.59□□□□□ -0.87
CDH3-209ENST00000569080 ERC1Q8IUD2 1116 aa9.59□□□□□ -0.87
CDH3-209ENST00000569080 RPAP2Q8IXW5 612 aaPredicted RBP9.59□□□□□ -0.87
CDH3-209ENST00000569080 RHPN1Q8TCX5 695 aa9.59□□□□□ -0.87
CDH3-209ENST00000569080 SH3RF3Q8TEJ3 882 aaPredicted RBP9.59□□□□□ -0.87
CDH3-209ENST00000569080 OSBPL5Q9H0X9 879 aaPredicted RBP9.59□□□□□ -0.87
CDH3-209ENST00000569080 IL1RAPL2Q9NP60 686 aa9.59□□□□□ -0.87
CDH3-209ENST00000569080 ZCCHC17Q9NP64 241 aaKnown RBP9.59□□□□□ -0.87
CDH3-209ENST00000569080 RAI14Q9P0K7 980 aa9.59□□□□□ -0.87
CDH3-209ENST00000569080 LRP2BPQ9P2M1 347 aa9.59□□□□□ -0.87
CDH3-209ENST00000569080 HPS5Q9UPZ3 1129 aa9.59□□□□□ -0.87
CDH3-209ENST00000569080 NDUFB9Q9Y6M9 179 aa9.59□□□□□ -0.87
CDH3-209ENST00000569080 RBBP6Q7Z6E9 1792 aaKnown RBP9.59□□□□□ -0.87
CDH3-209ENST00000569080 NAV1Q8NEY1 1877 aa9.58□□□□□ -0.88
CDH3-209ENST00000569080 TBC1D12O60347 775 aa9.58□□□□□ -0.88
CDH3-209ENST00000569080 LDHCP07864 332 aa9.58□□□□□ -0.88
CDH3-209ENST00000569080 CETPP11597 493 aa9.58□□□□□ -0.88
CDH3-209ENST00000569080 PPP4CP60510 307 aa9.58□□□□□ -0.88
CDH3-209ENST00000569080 SNAPC2Q13487 334 aa9.58□□□□□ -0.88
CDH3-209ENST00000569080 PKN2Q16513 984 aaKnown RBP9.58□□□□□ -0.88
CDH3-209ENST00000569080 NAA16Q6N069 864 aaPredicted RBP9.58□□□□□ -0.88
CDH3-209ENST00000569080 OTOP1Q7RTM1 612 aa9.58□□□□□ -0.88
CDH3-209ENST00000569080 AACSQ86V21 672 aa9.58□□□□□ -0.88
CDH3-209ENST00000569080 SCYL3Q8IZE3 742 aa9.58□□□□□ -0.88
CDH3-209ENST00000569080 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.58□□□□□ -0.88
CDH3-209ENST00000569080 ANTXR1Q9H6X2 564 aa9.58□□□□□ -0.88
CDH3-209ENST00000569080 AATFQ9NY61 560 aaKnown RBP eCLIP9.58□□□□□ -0.88
CDH3-209ENST00000569080 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.58□□□□□ -0.88
CDH3-209ENST00000569080 FLT1P17948 1338 aa9.57□□□□□ -0.88
CDH3-209ENST00000569080 FAM196BA6NMK8 535 aa9.57□□□□□ -0.88
CDH3-209ENST00000569080 PTPRAP18433 802 aa9.57□□□□□ -0.88
CDH3-209ENST00000569080 RRP1BQ14684 758 aaKnown RBP9.57□□□□□ -0.88
CDH3-209ENST00000569080 TAF1CQ15572 869 aaPredicted RBP9.57□□□□□ -0.88
CDH3-209ENST00000569080 HSP90AB4PQ58FF6 505 aa9.57□□□□□ -0.88
CDH3-209ENST00000569080 OTUD7BQ6GQQ9 843 aa9.57□□□□□ -0.88
CDH3-209ENST00000569080 FBXO46Q6PJ61 603 aaPredicted RBP9.57□□□□□ -0.88
CDH3-209ENST00000569080 TEX11Q8IYF3 940 aa9.57□□□□□ -0.88
CDH3-209ENST00000569080 CD99L2Q8TCZ2 262 aa9.57□□□□□ -0.88
CDH3-209ENST00000569080 KIF1BPQ96EK5 621 aa9.57□□□□□ -0.88
CDH3-209ENST00000569080 DNAJC18Q9H819 358 aa9.57□□□□□ -0.88
CDH3-209ENST00000569080 MYH1P12882 1939 aa9.56□□□□□ -0.88
CDH3-209ENST00000569080 MYH7P12883 1935 aa9.56□□□□□ -0.88
CDH3-209ENST00000569080 A0A0G2JLL6 359 aaPredicted RBP9.56□□□□□ -0.88
CDH3-209ENST00000569080 TLR2O60603 784 aa9.56□□□□□ -0.88
CDH3-209ENST00000569080 HMMRO75330 724 aa9.56□□□□□ -0.88
CDH3-209ENST00000569080 SP3Q02447 781 aa9.56□□□□□ -0.88
CDH3-209ENST00000569080 GPAT2Q6NUI2 795 aa9.56□□□□□ -0.88
CDH3-209ENST00000569080 PRRT2Q7Z6L0 340 aaPredicted RBP9.56□□□□□ -0.88
CDH3-209ENST00000569080 ANKRD23Q86SG2 305 aa9.56□□□□□ -0.88
CDH3-209ENST00000569080 CCDC84Q86UT8 332 aaPredicted RBP9.56□□□□□ -0.88
CDH3-209ENST00000569080 METTL16Q86W50 562 aaKnown RBP9.56□□□□□ -0.88
CDH3-209ENST00000569080 ZSCAN29Q8IWY8 852 aaPredicted RBP9.56□□□□□ -0.88
CDH3-209ENST00000569080 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.56□□□□□ -0.88
CDH3-209ENST00000569080 AFG3L2Q9Y4W6 797 aa9.56□□□□□ -0.88
CDH3-209ENST00000569080 TRIM17Q9Y577 477 aa9.56□□□□□ -0.88
CDH3-209ENST00000569080 CXCL11O14625 94 aa9.55□□□□□ -0.88
CDH3-209ENST00000569080 CTNND1O60716 968 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms